##gff-version 3
HG04160_chrY	CAT	gene	76795	78571	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;gene_id=HG04160_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG04160_ch_G0000001;Name=LOC124905300
HG04160_chrY	CAT	transcript	76795	78571	9900	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG04160_ch_T0000001;Name=LOC124905300
HG04160_chrY	CAT	exon	76795	76824	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	76795	76824	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	76795	76797	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG04160_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	76825	76899	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG04160_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	76900	77397	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	76900	77397	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	77398	77637	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG04160_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	77638	77874	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	77638	77874	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	77875	78006	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	77875	78006	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	78007	78313	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG04160_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	78314	78351	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	78314	78351	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	78352	78530	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG04160_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	78531	78571	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG04160_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	78531	78571	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG04160_ch_T0000001:5;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	78569	78571	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.18100000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000001;gene_id=HG04160_ch_G0000001;Parent=HG04160_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG04160_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	83547	104844	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;gene_id=HG04160_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG04160_ch_G0000002;Name=PLCXD1
HG04160_chrY	CAT	transcript	83547	104844	9940	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG04160_ch_T0000002;Name=PLCXD1
HG04160_chrY	CAT	exon	83547	83849	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	83850	86322	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	86323	86470	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	86344	86470	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	86344	86346	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG04160_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	86471	90861	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	90862	90998	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	90862	90998	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	90999	92775	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	92776	92904	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	92776	92904	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	92905	93502	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	93503	93658	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	93503	93658	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	93659	95038	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	95039	95222	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	95039	95222	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	95223	100602	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	100603	104844	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	100603	100841	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	100839	100841	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000002;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG04160_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	83547	104844	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG04160_ch_T0000003;Name=PLCXD1
HG04160_chrY	CAT	exon	83547	83849	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	83850	86322	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	86323	86470	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	86471	90861	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	90862	90998	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	90999	92775	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	92776	92904	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	92905	93502	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	93503	93658	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	93659	95038	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	95039	95222	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	95223	100602	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	100603	101285	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	101286	103393	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	103394	104844	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=298.566;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000003;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000003;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	85675	104844	9920	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG04160_ch_T0000004;Name=PLCXD1
HG04160_chrY	CAT	exon	85675	85789	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	85790	86322	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	86323	86470	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	86344	86470	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	86344	86346	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG04160_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	86471	90861	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	90862	90998	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	90862	90998	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	90999	92775	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	92776	92904	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	92776	92904	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	92905	93502	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	93503	93658	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	93503	93658	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	93659	95038	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	95039	95222	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	95039	95222	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	95223	100602	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	100603	104844	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	100603	100841	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	100839	100841	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=216.56366666666665;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000004;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG04160_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	85844	104844	9940	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG04160_ch_T0000005;Name=PLCXD1
HG04160_chrY	CAT	exon	85844	86189	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	86190	86322	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	86323	86470	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	86344	86470	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	86344	86346	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG04160_ch_T0000005;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	86471	90861	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	90862	90998	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	90862	90998	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	90999	92775	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	92776	92904	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	92776	92904	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	92905	93502	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	93503	93658	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	93503	93658	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	93659	95038	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	95039	95222	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	95039	95222	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	95223	100602	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG04160_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	100603	104844	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG04160_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	100603	100841	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG04160_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	100839	100841	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000005;gene_id=HG04160_ch_G0000002;Parent=HG04160_ch_T0000005;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG04160_ch_T0000005;Name=PLCXD1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	106245	119950	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG04160_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000003;Name=GTPBP6
HG04160_chrY	CAT	transcript	106245	117995	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG04160_ch_T0000006;Name=GTPBP6
HG04160_chrY	CAT	exon	106245	106683	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	106560	106683	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	106560	106562	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG04160_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	106684	108442	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108443	108595	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108443	108595	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108596	108814	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108815	108963	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108815	108963	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108964	112313	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	112314	112522	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	112314	112522	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	112523	113523	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	113524	113922	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	113524	113922	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	113923	115147	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115148	115215	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115148	115215	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	115216	115887	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115888	116018	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115888	116018	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116019	116226	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	116227	116297	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	116227	116244	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	116242	116244	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG04160_ch_T0000006;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116298	117929	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000006:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	117930	117995	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000006;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000006;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000006:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	106245	119950	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG04160_ch_T0000007;Name=GTPBP6
HG04160_chrY	CAT	exon	106245	106683	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	106560	106683	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	106560	106562	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG04160_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	106684	108442	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108443	108595	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108443	108595	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108596	108814	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108815	108963	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108815	108963	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108964	112313	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	112314	112522	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	112314	112522	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	112523	113763	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	113764	113922	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	113764	113922	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	113923	115147	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115148	115215	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115148	115215	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	115216	115887	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115888	116018	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115888	116018	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116019	116226	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	116227	116297	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	116227	116297	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116298	118063	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118064	118201	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	118064	118201	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118202	119592	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000007:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	119593	119950	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	119593	119941	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000007:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	119939	119941	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000007;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000007;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG04160_ch_T0000007;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	106245	119950	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG04160_ch_T0000008;Name=GTPBP6
HG04160_chrY	CAT	exon	106245	106683	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	106560	106683	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	106560	106562	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG04160_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	106684	108442	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108443	108595	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108443	108595	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108596	108814	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108815	108963	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108815	108963	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108964	112313	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	112314	112522	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	112314	112522	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	112523	113523	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	113524	113922	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	113524	113922	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	113923	115147	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115148	115215	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115148	115215	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	115216	115887	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115888	116018	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115888	116018	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116019	116226	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	116227	116297	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	116227	116297	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116298	118063	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118064	118201	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	118064	118201	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118202	119592	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000008:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	119593	119950	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	119593	119941	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000008:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	119939	119941	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000008;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000008;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG04160_ch_T0000008;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	106245	119950	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG04160_ch_T0000009;Name=GTPBP6
HG04160_chrY	CAT	exon	106245	106683	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	106560	106683	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	106560	106562	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG04160_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	106684	108442	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108443	108595	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108443	108595	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108596	108814	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108815	108963	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108815	108963	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108964	112313	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	112314	112522	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	112314	112522	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	112523	113523	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	113524	113922	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	113524	113922	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	113923	115147	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115148	115215	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115148	115215	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	115216	115887	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115888	116018	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115888	116018	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116019	116226	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	116227	116297	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	116227	116297	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116298	118063	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118064	118201	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	118064	118133	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	118131	118133	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG04160_ch_T0000009;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118202	118428	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118429	118634	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118635	119592	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000009:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	119593	119950	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000009;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000009;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000009:10;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	106245	119950	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG04160_ch_T0000010;Name=GTPBP6
HG04160_chrY	CAT	exon	106245	106683	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	106560	106683	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	106560	106562	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG04160_ch_T0000010;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	106684	108442	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:0;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108443	108595	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108443	108595	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108596	108814	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:1;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	108815	108963	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	108815	108963	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	108964	112313	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:2;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	112314	112522	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	112314	112522	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	112523	113523	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:3;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	113524	113922	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	113524	113922	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	113923	115147	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:4;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115148	115215	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115148	115215	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	115216	115887	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:5;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	115888	116018	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	115888	116018	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116019	116226	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:6;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	116227	116297	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	116227	116297	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	116298	118063	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:7;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118064	118201	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	118064	118133	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG04160_ch_T0000010:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	118131	118133	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG04160_ch_T0000010;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118202	118428	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:8;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	118429	118569	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	118570	119592	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG04160_ch_T0000010:9;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	119593	119950	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000010;gene_id=HG04160_ch_G0000003;Parent=HG04160_ch_T0000010;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG04160_ch_T0000010:10;Name=GTPBP6;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	120299	122487	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;gene_id=HG04160_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap_pairwise;ID=HG04160_ch_G0000004;Name=LINC00685
HG04160_chrY	CAT	transcript	120299	122487	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000011;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG04160_ch_T0000011;Name=LINC00685
HG04160_chrY	CAT	exon	120299	122487	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000011;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_T0000011;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG04160_ch_T0000011:0;Name=LINC00685;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	120299	122487	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000012;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG04160_ch_T0000012;Name=LINC00685
HG04160_chrY	CAT	exon	120299	120705	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000012;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_T0000012;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG04160_ch_T0000012:0;Name=LINC00685;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	120706	121361	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000012;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_T0000012;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG04160_ch_T0000012:0;Name=LINC00685;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	121362	122487	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000012;gene_id=HG04160_ch_G0000004;Parent=HG04160_ch_T0000012;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG04160_ch_T0000012:1;Name=LINC00685;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	141964	193967	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;gene_id=HG04160_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000005;Name=PPP2R3B
HG04160_chrY	CAT	transcript	141964	183596	100	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000013;Name=PPP2R3B
HG04160_chrY	CAT	exon	141964	142548	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	142548	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	142549	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169218	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	180889	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000013:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	180890	183596	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	180890	181129	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000013:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	181127	181129	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000013;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000013;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000013;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	141964	193967	100	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000014;Name=PPP2R3B
HG04160_chrY	CAT	exon	141964	142548	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	142548	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000014;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	142549	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169218	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	193427	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000014:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	193428	193967	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000014:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	193428	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000014:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	193749	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000014;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000014;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000014;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142269	172712	100	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000015;Name=PPP2R3B
HG04160_chrY	CAT	exon	142269	143094	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	143094	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000015;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	143095	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	169057	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000015;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	169882	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169883	169960	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169961	172156	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000015:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	172157	172712	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000015;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000015;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000015:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142269	183596	100	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000016;Name=PPP2R3B
HG04160_chrY	CAT	exon	142269	143094	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	143094	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000016;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	143095	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169218	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	180889	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000016:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	180890	183596	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000016:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	180890	181129	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000016:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	181127	181129	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000016;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000016;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000016;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142269	193967	100	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000017;Name=PPP2R3B
HG04160_chrY	CAT	exon	142269	143094	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	143094	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000017;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	143095	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169218	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	193427	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000017:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	193428	193967	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000017:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	193428	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000017:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	193749	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000017;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000017;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000017;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142269	193967	100	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000018;Name=PPP2R3B
HG04160_chrY	CAT	exon	142269	143094	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	143094	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000018;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	143095	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	169057	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000018;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	169882	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169883	169960	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169961	193427	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000018:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	193428	193967	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000018;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000018;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000018:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142269	193967	100	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000019;Name=PPP2R3B
HG04160_chrY	CAT	exon	142269	143094	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	142398	143094	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	142398	142400	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000019;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	143095	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000019:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	169057	169059	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000019;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	169882	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169883	169960	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169961	192103	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	192104	192167	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	192168	193427	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000019:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	193428	193967	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000019;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000019;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000019:14;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	142989	193967	100	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG04160_ch_T0000020;Name=PPP2R3B
HG04160_chrY	CAT	exon	142989	144029	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	143909	144029	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	143909	143911	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG04160_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	144030	146636	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146637	146743	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146637	146743	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146744	146810	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	146811	146929	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	146811	146929	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	146930	148913	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	148914	149089	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	148914	149089	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149090	149416	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149417	149506	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149417	149506	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	149507	149992	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	149993	150041	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	149993	150041	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	150042	153192	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153193	153349	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153193	153349	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153350	153857	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	153858	153944	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	153858	153944	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	153945	154384	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154385	154459	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154385	154459	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154460	154885	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	154886	154988	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	154886	154988	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	154989	155241	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	155242	155345	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	155242	155345	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	155346	169032	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	169033	169218	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	169033	169218	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	169219	193427	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG04160_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	193428	193967	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG04160_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	193428	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG04160_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	193749	193751	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000020;gene_id=HG04160_ch_G0000005;Parent=HG04160_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG04160_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	237509	281035	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=HG04160_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=HG04160_ch_G0000006;Name=LOC102724521
HG04160_chrY	CAT	transcript	237509	281035	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG04160_ch_T0000021;Name=LOC102724521
HG04160_chrY	CAT	exon	237509	237977	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:0;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	237978	241324	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:0;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	241325	241582	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:1;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	241583	243071	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:1;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	243072	243186	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:2;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	243187	245102	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:2;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	245103	245269	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:3;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	245270	248204	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:3;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	248205	248277	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:4;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	248278	248510	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:4;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	248511	248815	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:5;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	248816	267341	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:5;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	267342	267954	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:6;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	267955	277795	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:6;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	277796	277916	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:7;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	277917	278992	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:7;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	278993	279191	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:8;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	279192	279795	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000021:8;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	279796	281035	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG04160_ch_T0000021;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000021;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000021:9;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	237753	250287	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG04160_ch_T0000022;Name=LOC102724521
HG04160_chrY	CAT	exon	237753	237977	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:0;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	237978	241324	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000022:0;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	241325	241582	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:1;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	241583	243071	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000022:1;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	243072	243186	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:2;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	243187	245102	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000022:2;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	245103	245269	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:3;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	245270	248727	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000022:3;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	248728	248815	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:4;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	248816	249602	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG04160_ch_T0000022:4;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	249603	250287	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG04160_ch_T0000022;gene_id=HG04160_ch_G0000006;Parent=HG04160_ch_T0000022;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG04160_ch_T0000022:5;Name=LOC102724521;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	448090	468722	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;gene_id=HG04160_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG04160_ch_G0000007;Name=SHOX
HG04160_chrY	CAT	transcript	448090	468722	9940	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG04160_ch_T0000023;Name=SHOX
HG04160_chrY	CAT	exon	448090	448473	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:0;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	448197	448473	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG04160_ch_T0000023:0;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	448197	448199	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG04160_ch_T0000023;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	448474	451916	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:0;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	451917	452125	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:1;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	451917	452125	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG04160_ch_T0000023:1;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	452126	457950	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:1;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	457951	458008	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:2;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	457951	458008	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG04160_ch_T0000023:2;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	458009	458128	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:2;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	458129	458217	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:3;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	458129	458217	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG04160_ch_T0000023:3;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	458218	461520	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:3;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	461521	464571	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:4;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	461521	461766	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG04160_ch_T0000023:4;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	461764	461766	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG04160_ch_T0000023;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	464572	464653	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:4;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	464654	464735	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:5;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	464736	464817	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG04160_ch_T0000023:5;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	464818	468722	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000023;gene_id=HG04160_ch_G0000007;Parent=HG04160_ch_T0000023;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG04160_ch_T0000023:6;Name=SHOX;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1014712	1037217	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG04160_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000008;Name=CRLF2
HG04160_chrY	CAT	transcript	1014712	1037217	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG04160_ch_T0000024;Name=CRLF2
HG04160_chrY	CAT	exon	1014712	1015382	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1015119	1015382	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1015119	1015121	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG04160_ch_T0000024;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1015383	1017453	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1017454	1017538	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1017454	1017538	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1017539	1021013	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1021014	1021134	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1021014	1021134	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1021135	1023130	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1023131	1023293	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1023131	1023293	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1023294	1026972	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1026973	1027106	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1026973	1027106	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1027107	1031003	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1031004	1031170	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1031004	1031016	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1031014	1031016	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG04160_ch_T0000024;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1031171	1037123	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000024:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1037124	1037217	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000024;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000024;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000024:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1014712	1037217	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG04160_ch_T0000025;Name=CRLF2
HG04160_chrY	CAT	exon	1014712	1015382	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1015119	1015382	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1015119	1015121	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG04160_ch_T0000025;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1015383	1017453	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1017454	1017538	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1017454	1017538	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1017539	1021013	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1021014	1021134	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1021014	1021134	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1021135	1023130	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1023131	1023293	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1023131	1023293	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1023294	1026972	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1026973	1027106	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1026973	1027106	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1027107	1031003	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1031004	1031170	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1031004	1031170	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1031171	1033373	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1033374	1033476	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1033374	1033476	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1033477	1037123	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000025:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1037124	1037217	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000025:7;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1037124	1037202	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000025:7;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1037200	1037202	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000025;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000025;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG04160_ch_T0000025;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1014712	1037217	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG04160_ch_T0000026;Name=CRLF2
HG04160_chrY	CAT	exon	1014712	1015382	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1015119	1015382	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1015119	1015121	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG04160_ch_T0000026;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1015383	1017453	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1017454	1017538	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1017454	1017538	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1017539	1021013	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1021014	1021134	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1021014	1021134	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1021135	1023130	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1023131	1023293	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1023131	1023293	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1023294	1026972	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1026973	1027106	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1026973	1027106	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1027107	1031003	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1031004	1031170	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1031004	1031170	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1031171	1033373	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1033374	1033473	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1033374	1033473	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1033474	1037123	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG04160_ch_T0000026:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1037124	1037217	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG04160_ch_T0000026:7;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1037124	1037202	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG04160_ch_T0000026:7;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1037200	1037202	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000026;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000026;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG04160_ch_T0000026;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1014712	1037217	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG04160_ch_T0000027;Name=CRLF2
HG04160_chrY	CAT	exon	1014712	1015382	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1015383	1017453	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:0;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1017454	1017538	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1017539	1021013	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:1;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1021014	1021134	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1021135	1023371	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:2;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1023372	1023716	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1023717	1026972	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:3;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1026973	1027106	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1027107	1031003	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:4;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1031004	1031170	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1031171	1033373	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:5;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1033374	1033473	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1033474	1037123	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG04160_ch_T0000027:6;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1037124	1037217	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000027;gene_id=HG04160_ch_G0000008;Parent=HG04160_ch_T0000027;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG04160_ch_T0000027:7;Name=CRLF2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1093569	1155130	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG04160_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000009;Name=CSF2RA
HG04160_chrY	CAT	transcript	1093569	1136511	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000028;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1136197	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000028:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136198	1136511	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000028:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136198	1136305	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000028:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136303	1136305	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000028;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000028;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000028;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000029;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1132995	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1132996	1133097	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1132996	1133097	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133098	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000029:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000029:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000029;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000029;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000029;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000030;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1132995	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1132996	1133097	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1132996	1133097	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133098	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000030:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000030:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000030:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000030;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000030;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000030;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000031;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000031:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000031:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000031;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000031;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000031;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000032;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101342	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101343	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000032:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000032:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000032:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000032;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000032;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000032;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000033;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000033:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000033:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000033:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000033;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000033;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000033;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000034;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121372	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121373	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121373	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1128751	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1128752	1128814	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1128752	1128814	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1128815	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000034:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000034:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000034:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000034;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000034;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000034;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000035;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1097399	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1097400	1097521	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1097522	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000035:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000035;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000035:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000035;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000035;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000035:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000036;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000036;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000037;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000037;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000038;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000038;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1136511	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000039;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1136197	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136198	1136511	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000039:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136198	1136305	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136303	1136305	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000039;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000040;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000040;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1152582	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000041;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152381	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152382	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152382	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152582	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000041:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152505	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152503	1152505	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000041;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1152759	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000042;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152759	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000042:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152627	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152625	1152627	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000042;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1152759	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000043;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152759	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000043:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152627	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152625	1152627	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000043;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1152759	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000044;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000044:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152759	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000044:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152627	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000044:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152625	1152627	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000044;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000045;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152381	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152382	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000045:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152382	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152424	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000045;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000046;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152404	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152402	1152404	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000046;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000047;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152404	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152402	1152404	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000047;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000048;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152381	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152382	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152382	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152424	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000048;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000049;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000049;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000050;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139958	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139956	1139958	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000050;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000051;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152381	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152382	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152382	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152424	1152426	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000051;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1153041	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000052;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152381	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152382	1153041	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000052;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1155130	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000053;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1142637	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1142638	1142744	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1142638	1142706	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1142704	1142706	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1142745	1154939	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1154940	1155130	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000053;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000053:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1155130	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000054;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1154939	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1154940	1155130	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1154940	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1154973	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000054;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1155130	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000055;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1154939	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1154940	1155130	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1154940	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1154973	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000055;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1155130	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000056;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1154939	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1154940	1155130	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000056;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1155130	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000057;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1154939	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000057:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1154940	1155130	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000057:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1154940	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1154973	1154975	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000057;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000058;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000058;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000058:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000059;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136071	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1136069	1136071	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000059;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000060;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109012	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109013	1109164	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109165	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000060:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000060:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000060;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000061;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101396	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101397	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1132995	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1132996	1133097	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1132996	1133097	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133098	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000061:13;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000061;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000062;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115833	1115906	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1115833	1115835	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1139771	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1139846	1139848	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000062;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1093569	1140304	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG04160_ch_T0000063;Name=CSF2RA
HG04160_chrY	CAT	exon	1093569	1093634	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1093635	1101332	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1101333	1101420	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1101421	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1139770	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1139771	1140304	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000063;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000063;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1108840	1152759	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000064;Name=CSF2RA
HG04160_chrY	CAT	exon	1108840	1109164	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109165	1109281	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1109282	1109383	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1109308	1109383	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1109308	1109310	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109384	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112796	1112938	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000064:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152759	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000064:12;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152627	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000064:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152625	1152627	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000064;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1109407	1152763	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG04160_ch_T0000065;Name=CSF2RA
HG04160_chrY	CAT	exon	1109407	1109646	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1109647	1112795	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1112796	1112938	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1112852	1112938	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1112852	1112854	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG04160_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1112939	1115536	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115537	1115660	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115537	1115660	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115661	1115776	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1115777	1115906	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1115777	1115906	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1115907	1117324	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1117325	1117497	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1117325	1117497	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1117498	1121353	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1121354	1121487	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1121354	1121487	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1121488	1122884	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1122885	1122914	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1122885	1122914	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1122915	1130230	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1130231	1130366	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1130231	1130366	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1130367	1133657	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1133658	1133754	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1133658	1133754	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1133755	1136015	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1136016	1136097	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1136016	1136097	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1136098	1152377	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152378	1152400	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152378	1152400	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1152401	1152488	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG04160_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1152489	1152763	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG04160_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1152489	1152627	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG04160_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1152625	1152627	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000065;gene_id=HG04160_ch_G0000009;Parent=HG04160_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG04160_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1120483	1120935	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;alternative_source_transcripts=hg002_chrY_paternal_15.1;gene_id=HG04160_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap;ID=HG04160_ch_G0000010;Name=LOC124905238
HG04160_chrY	CAT	transcript	1120483	1120935	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=299.33299999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000066;gene_id=HG04160_ch_G0000010;Parent=HG04160_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG04160_ch_T0000066;Name=LOC124905238
HG04160_chrY	CAT	exon	1120483	1120519	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=299.33299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000066;gene_id=HG04160_ch_G0000010;Parent=HG04160_ch_T0000066;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG04160_ch_T0000066:0;Name=LOC124905238;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1120520	1120779	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=299.33299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000066;gene_id=HG04160_ch_G0000010;Parent=HG04160_ch_T0000066;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG04160_ch_T0000066:0;Name=LOC124905238;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1120780	1120935	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=299.33299999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;alternative_source_transcripts=hg002_chrY_paternal_15.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000066;gene_id=HG04160_ch_G0000010;Parent=HG04160_ch_T0000066;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG04160_ch_T0000066:1;Name=LOC124905238;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1120552	1120583	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG04160_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG04160_ch_G0000011;Name=MIR3690
HG04160_chrY	CAT	transcript	1120552	1120626	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG04160_ch_T0000067;gene_id=HG04160_ch_G0000011;Parent=HG04160_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG04160_ch_T0000067;Name=MIR3690
HG04160_chrY	CAT	exon	1120552	1120626	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG04160_ch_T0000067;gene_id=HG04160_ch_G0000011;Parent=HG04160_ch_T0000067;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG04160_ch_T0000067:0;Name=MIR3690;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1120561	1120583	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG04160_ch_T0000068;gene_id=HG04160_ch_G0000011;Parent=HG04160_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG04160_ch_T0000068;Name=MIR3690
HG04160_chrY	CAT	exon	1120561	1120583	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG04160_ch_T0000068;gene_id=HG04160_ch_G0000011;Parent=HG04160_ch_T0000068;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG04160_ch_T0000068:0;Name=MIR3690;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1120855	1120886	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;gene_id=HG04160_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG04160_ch_G0000012;Name=MIR3690
HG04160_chrY	CAT	transcript	1120855	1120929	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG04160_ch_T0000069;gene_id=HG04160_ch_G0000012;Parent=HG04160_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG04160_ch_T0000069;Name=MIR3690
HG04160_chrY	CAT	exon	1120855	1120929	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_17.1;transcript_id=HG04160_ch_T0000069;gene_id=HG04160_ch_G0000012;Parent=HG04160_ch_T0000069;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG04160_ch_T0000069:0;Name=MIR3690;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1120864	1120886	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG04160_ch_T0000070;gene_id=HG04160_ch_G0000012;Parent=HG04160_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG04160_ch_T0000070;Name=MIR3690
HG04160_chrY	CAT	exon	1120864	1120886	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.2,hg002_chrY_paternal_17.2;transcript_id=HG04160_ch_T0000070;gene_id=HG04160_ch_G0000012;Parent=HG04160_ch_T0000070;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG04160_ch_T0000070:0;Name=MIR3690;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1167602	1212318	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG04160_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000013;Name=IL3RA
HG04160_chrY	CAT	transcript	1167602	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000071;Name=IL3RA
HG04160_chrY	CAT	exon	1167602	1167743	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1167744	1172419	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172420	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172458	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172458	1172460	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183023	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183024	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183024	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000071:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000071:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000071;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000071;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000071;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1167602	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000072;Name=IL3RA
HG04160_chrY	CAT	exon	1167602	1167743	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1167744	1172419	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172420	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172458	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172458	1172460	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000072;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183023	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183024	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183024	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000072:11;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000072:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000072;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000072;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000072;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1167602	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000073;Name=IL3RA
HG04160_chrY	CAT	exon	1167602	1167743	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1167744	1172422	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172423	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172458	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172458	1172460	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000073;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183023	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183024	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183024	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000073:11;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000073:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000073;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000073;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000073;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1167602	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000074;Name=IL3RA
HG04160_chrY	CAT	exon	1167602	1167743	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1167744	1172419	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172420	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172458	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172458	1172460	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000074;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183026	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183027	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183027	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000074:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000074:11;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000074:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000074;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000074;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000074;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1167602	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000075;Name=IL3RA
HG04160_chrY	CAT	exon	1167602	1167743	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1167744	1172422	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172423	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172458	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172458	1172460	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000075;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183026	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183027	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183027	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000075:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000075:11;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000075:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000075;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000075;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000075;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1172274	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000089;Name=IL3RA
HG04160_chrY	CAT	exon	1172274	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172278	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172278	1172280	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000089;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183023	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183024	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183024	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000089:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000089:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000089:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000089;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000089;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000089;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1172274	1212318	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG04160_ch_T0000090;Name=IL3RA
HG04160_chrY	CAT	exon	1172274	1172521	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1172278	1172521	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1172278	1172280	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG04160_ch_T0000090;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172522	1176007	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:0;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1176008	1176126	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1176008	1176126	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1176127	1179123	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:1;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1179124	1179238	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1179124	1179238	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1179239	1182801	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:2;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1182802	1182934	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1182802	1182934	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1182935	1183026	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:3;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183027	1183208	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1183027	1183208	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183209	1186864	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:4;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186865	1186980	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1186865	1186980	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186981	1189497	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:5;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189498	1189524	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1189498	1189524	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1189525	1195888	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:6;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195889	1196003	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1195889	1196003	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1196004	1208287	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:7;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1208288	1208393	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1208288	1208393	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1208394	1210651	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:8;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1210652	1210733	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1210652	1210733	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1210734	1212019	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG04160_ch_T0000090:9;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1212020	1212318	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG04160_ch_T0000090:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1212020	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG04160_ch_T0000090:10;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1212092	1212094	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000090;gene_id=HG04160_ch_G0000013;Parent=HG04160_ch_T0000090;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG04160_ch_T0000090;Name=IL3RA;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1168391	1208105	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;gene_id=HG04160_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG04160_ch_G0000014;Name=LOC101928032
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000076;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1192121	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1192122	1192500	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1192501	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000076:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.10;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.10;transcript_score=291.63300000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000076;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000076;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000076:8;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000077;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1192121	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1192122	1192500	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1192501	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000077:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=291.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000077;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000077;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000077:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000078;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1192121	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1192122	1192500	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1192501	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198734	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198735	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000078:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.12;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.12;transcript_score=291.68;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000078;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000078;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000078:8;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000079;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000079:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.13;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.13;transcript_score=290.282;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000079;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000079;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000079:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000080;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000080:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.14;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.14;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.14;transcript_score=290.538;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000080;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000080;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000080:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1190109	1000	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000081;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000081:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000081:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000081:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000081:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1189396	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000081:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189397	1190109	.	-	.	source_transcript=hg002_chrY_paternal_21.2;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.2;transcript_score=291.471;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000081;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000081;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000081:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1190109	1000	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000082;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000082:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000082:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000082:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000082:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1189170	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000082:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1189171	1190109	.	-	.	source_transcript=hg002_chrY_paternal_21.3;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.3;transcript_score=292.073;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000082;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000082;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000082:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000083;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198734	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198735	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000083:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.4;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.4;transcript_score=290.599;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000083;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000083;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000083:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000084;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198747	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198748	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.5;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.5;transcript_score=290.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000084;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000085;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1198747	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198748	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000085:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.6;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.6;transcript_score=290.29699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000085;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000085;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000085:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000086;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1198734	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198735	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000086:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.7;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.7;transcript_score=290.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000086;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000086;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000086:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000087;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.8;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.8;transcript_score=289.73900000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000087;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1168391	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000088;Name=LOC101928032
HG04160_chrY	CAT	exon	1168391	1169484	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1169485	1172289	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1172290	1172505	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1172506	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183173	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183174	1183321	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183322	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1192355	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1192356	1192500	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1192501	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:6;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000088:7;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.9;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.9;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.9;transcript_score=290.998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000088;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000088;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000088:8;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1181468	1208105	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG04160_ch_T0000091;Name=LOC101928032
HG04160_chrY	CAT	exon	1181468	1181554	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1181555	1183011	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000091:0;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1183012	1183420	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1183421	1186215	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000091:1;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1186216	1186784	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1186785	1195853	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000091:2;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1195854	1195922	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1195923	1198751	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000091:3;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1198752	1198886	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1198887	1207950	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG04160_ch_T0000091:4;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1207951	1208105	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff,transMap_pairwise;transcript_id=HG04160_ch_T0000091;gene_id=HG04160_ch_G0000014;Parent=HG04160_ch_T0000091;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG04160_ch_T0000091:5;Name=LOC101928032;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1215781	1221742	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG04160_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000015;Name=SLC25A6
HG04160_chrY	CAT	transcript	1215781	1221742	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG04160_ch_T0000092;Name=SLC25A6
HG04160_chrY	CAT	exon	1215781	1216388	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG04160_ch_T0000092:0;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1216231	1216388	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG04160_ch_T0000092:0;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1216231	1216233	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG04160_ch_T0000092;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1216389	1216907	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG04160_ch_T0000092:0;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1216908	1217048	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG04160_ch_T0000092:1;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1216908	1217048	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG04160_ch_T0000092:1;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1217049	1218869	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG04160_ch_T0000092:1;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1218870	1219356	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG04160_ch_T0000092:2;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1218870	1219356	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG04160_ch_T0000092:2;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1219357	1221527	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG04160_ch_T0000092:2;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1221528	1221742	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG04160_ch_T0000092:3;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1221528	1221638	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG04160_ch_T0000092:3;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1221636	1221638	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000092;gene_id=HG04160_ch_G0000015;Parent=HG04160_ch_T0000092;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG04160_ch_T0000092;Name=SLC25A6;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1221622	1226513	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG04160_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000016;Name=LOC105373102
HG04160_chrY	CAT	transcript	1221622	1226513	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG04160_ch_T0000093;Name=LOC105373102
HG04160_chrY	CAT	exon	1221622	1221970	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000093:0;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1221622	1221970	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG04160_ch_T0000093:0;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1221622	1221624	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG04160_ch_T0000093;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1221971	1224761	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG04160_ch_T0000093:0;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1224762	1225180	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000093:1;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1224762	1225180	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG04160_ch_T0000093:1;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1225181	1226003	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG04160_ch_T0000093:1;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1226004	1226513	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000093:2;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1226004	1226024	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG04160_ch_T0000093:2;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1226022	1226024	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000093;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000093;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG04160_ch_T0000093;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1221622	1226513	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG04160_ch_T0000094;Name=LOC105373102
HG04160_chrY	CAT	exon	1221622	1221970	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000094:0;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1221971	1224761	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG04160_ch_T0000094:0;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1224762	1225180	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000094:1;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1225181	1226003	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG04160_ch_T0000094:1;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1226004	1226147	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000094:2;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1226148	1226241	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG04160_ch_T0000094:2;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1226242	1226513	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000094;gene_id=HG04160_ch_G0000016;Parent=HG04160_ch_T0000094;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG04160_ch_T0000094:3;Name=LOC105373102;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1226657	1229044	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG04160_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG04160_ch_G0000017;Name=LINC00106
HG04160_chrY	CAT	transcript	1226657	1229044	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG04160_ch_T0000095;Name=LINC00106
HG04160_chrY	CAT	exon	1226657	1226856	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_T0000095;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG04160_ch_T0000095:0;Name=LINC00106;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1226857	1228456	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_T0000095;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG04160_ch_T0000095:0;Name=LINC00106;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1228457	1228590	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_T0000095;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG04160_ch_T0000095:1;Name=LINC00106;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1228591	1228998	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_T0000095;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG04160_ch_T0000095:1;Name=LINC00106;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1228999	1229044	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG04160_ch_T0000095;gene_id=HG04160_ch_G0000017;Parent=HG04160_ch_T0000095;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG04160_ch_T0000095:2;Name=LINC00106;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1230161	1243148	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG04160_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG04160_ch_G0000018;Name=ASMTL-AS1
HG04160_chrY	CAT	transcript	1230161	1241291	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG04160_ch_T0000096;Name=ASMTL-AS1
HG04160_chrY	CAT	exon	1230161	1230216	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000096:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1230217	1231091	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000096:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1231092	1231855	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000096:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1231856	1232955	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000096:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1232956	1233080	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000096:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1233081	1240446	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000096:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1240447	1241291	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG04160_ch_T0000096;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000096;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000096:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1230161	1243148	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG04160_ch_T0000097;Name=ASMTL-AS1
HG04160_chrY	CAT	exon	1230161	1230216	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1230217	1231091	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000097:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1231092	1231855	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1231856	1232955	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000097:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1232956	1233080	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1233081	1240446	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000097:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1240447	1240592	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1240593	1241466	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000097:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1241467	1242015	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1242016	1242447	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG04160_ch_T0000097:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1242448	1243148	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG04160_ch_T0000097;gene_id=HG04160_ch_G0000018;Parent=HG04160_ch_T0000097;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG04160_ch_T0000097:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1232634	1281838	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;gene_id=HG04160_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM,transMap;ID=HG04160_ch_G0000019;Name=ASMTL
HG04160_chrY	CAT	transcript	1232634	1281838	9920	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG04160_ch_T0000098;Name=ASMTL
HG04160_chrY	CAT	exon	1232634	1232984	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1232764	1232984	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1232764	1232766	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG04160_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1232985	1240435	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1240436	1240558	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1240436	1240558	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1240559	1245666	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1245667	1245810	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1245667	1245810	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1245811	1246675	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1246676	1246808	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1246676	1246808	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1246809	1249351	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1249352	1249536	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1249352	1249536	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1249537	1253171	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1253172	1253334	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1253172	1253334	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1253335	1255384	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1255385	1255772	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1255385	1255772	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1255773	1259945	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1259946	1260054	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1259946	1260054	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1260055	1262966	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1262967	1263028	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1262967	1263028	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1263029	1263638	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1263639	1263703	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1263639	1263703	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1263704	1267040	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1267041	1267088	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1267041	1267088	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1267089	1270129	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1270130	1270261	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1270130	1270180	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000098:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1270178	1270180	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG04160_ch_T0000098;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1270262	1281709	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000098:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1281710	1281838	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000098;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000098;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000098:12;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1232634	1281838	9930	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG04160_ch_T0000099;Name=ASMTL
HG04160_chrY	CAT	exon	1232634	1232984	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1232764	1232984	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1232764	1232766	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG04160_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1232985	1240435	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1240436	1240558	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1240436	1240558	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1240559	1245666	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1245667	1245810	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1245667	1245810	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1245811	1246675	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1246676	1246808	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1246676	1246808	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1246809	1249351	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1249352	1249536	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1249352	1249536	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1249537	1253171	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1253172	1253334	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1253172	1253334	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1253335	1255384	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1255385	1255772	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1255385	1255772	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1255773	1259945	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1259946	1260054	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1259946	1260054	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1260055	1262966	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1262967	1263028	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1262967	1263028	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1263029	1263638	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1263639	1263703	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1263639	1263703	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1263704	1267040	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1267041	1267088	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1267041	1267088	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1267089	1270129	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1270130	1270261	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1270130	1270261	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1270262	1280839	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1280840	1280998	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:12;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1280840	1280932	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000099:12;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1280930	1280932	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG04160_ch_T0000099;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1280999	1281709	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000099:12;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1281710	1281838	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.571;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000099;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000099;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000099:13;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1232634	1281838	9920	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG04160_ch_T0000100;Name=ASMTL
HG04160_chrY	CAT	exon	1232634	1232984	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1232764	1232984	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1232764	1232766	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG04160_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1232985	1240435	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:0;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1240436	1240558	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1240436	1240558	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1240559	1245666	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:1;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1245667	1245810	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1245667	1245810	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1245811	1246675	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:2;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1246676	1246808	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1246676	1246808	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1246809	1249351	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:3;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1249352	1249536	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1249352	1249536	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1249537	1253171	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:4;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1253172	1253334	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1253172	1253334	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1253335	1255384	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:5;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1255385	1255772	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1255385	1255772	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1255773	1259945	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:6;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1259946	1260054	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1259946	1260054	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1260055	1262966	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:7;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1262967	1263028	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1262967	1263028	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1263029	1267040	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:8;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1267041	1267088	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1267041	1267088	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1267089	1270129	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:9;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1270130	1270261	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1270130	1270191	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG04160_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1270189	1270191	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG04160_ch_T0000100;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1270262	1281709	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG04160_ch_T0000100:10;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1281710	1281838	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.57299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000100;gene_id=HG04160_ch_G0000019;Parent=HG04160_ch_T0000100;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG04160_ch_T0000100:11;Name=ASMTL;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1290918	1366395	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG04160_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000020;Name=P2RY8
HG04160_chrY	CAT	transcript	1290918	1296057	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG04160_ch_T0000101;Name=P2RY8
HG04160_chrY	CAT	exon	1290918	1294917	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1293814	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG04160_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1293814	1293816	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG04160_ch_T0000101;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1294891	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG04160_ch_T0000101;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1294918	1295365	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1295366	1296057	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000101;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000101:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1290918	1322207	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG04160_ch_T0000102;Name=P2RY8
HG04160_chrY	CAT	exon	1290918	1294917	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1293814	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG04160_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1293814	1293816	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG04160_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1294891	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG04160_ch_T0000102;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1294918	1322152	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000102:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1322153	1322207	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000102;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000102;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000102:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1290918	1323867	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG04160_ch_T0000103;Name=P2RY8
HG04160_chrY	CAT	exon	1290918	1294917	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1293814	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG04160_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1293814	1293816	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG04160_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1294891	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG04160_ch_T0000103;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1294918	1323250	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000103:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1323251	1323867	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000103;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000103;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000103:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1290918	1366395	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG04160_ch_T0000104;Name=P2RY8
HG04160_chrY	CAT	exon	1290918	1294917	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1293814	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG04160_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1293814	1293816	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG04160_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1294891	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG04160_ch_T0000104;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1294918	1366130	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000104:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1366131	1366395	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000104;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000104;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000104:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1290918	1366395	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG04160_ch_T0000105;Name=P2RY8
HG04160_chrY	CAT	exon	1290918	1294917	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1293814	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG04160_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1293814	1293816	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG04160_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1294891	1294893	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG04160_ch_T0000105;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1294918	1296836	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000105:0;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1296837	1297005	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000105:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1297006	1366130	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG04160_ch_T0000105:1;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1366131	1366395	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000105;gene_id=HG04160_ch_G0000020;Parent=HG04160_ch_T0000105;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG04160_ch_T0000105:2;Name=P2RY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1420629	1431705	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG04160_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000021;Name=AKAP17A
HG04160_chrY	CAT	transcript	1420629	1431705	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG04160_ch_T0000106;Name=AKAP17A
HG04160_chrY	CAT	exon	1420629	1420794	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000106:0;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1420795	1422468	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000106:0;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1422469	1423249	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000106:1;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1422488	1423249	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG04160_ch_T0000106:0;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1422488	1422490	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG04160_ch_T0000106;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1423250	1424408	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000106:1;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1424409	1424557	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000106:2;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1424409	1424557	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG04160_ch_T0000106:1;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1424558	1428376	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000106:2;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1428377	1428617	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000106:3;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1428377	1428617	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG04160_ch_T0000106:2;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1428618	1429843	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000106:3;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1429844	1431705	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000106:4;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1429844	1430779	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG04160_ch_T0000106:3;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1430777	1430779	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000106;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000106;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG04160_ch_T0000106;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1420629	1431705	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG04160_ch_T0000107;Name=AKAP17A
HG04160_chrY	CAT	exon	1420629	1420794	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1420795	1422468	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000107:0;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1422469	1423249	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1423250	1424408	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000107:1;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1424409	1424557	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1424558	1428376	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000107:2;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1428377	1428617	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1428618	1429322	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000107:3;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1429323	1429392	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:4;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1429393	1429843	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG04160_ch_T0000107:4;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1429844	1431705	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000107;gene_id=HG04160_ch_G0000021;Parent=HG04160_ch_T0000107;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG04160_ch_T0000107:5;Name=AKAP17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1424480	1467844	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG04160_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000022;Name=ASMT
HG04160_chrY	CAT	transcript	1424480	1467844	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG04160_ch_T0000108;Name=ASMT
HG04160_chrY	CAT	exon	1424480	1424557	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1424558	1444081	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1444082	1444217	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1444149	1444217	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1444149	1444151	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG04160_ch_T0000108;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1444218	1452086	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1452087	1452261	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1452087	1452261	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1452262	1453216	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1453217	1453346	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1453217	1453346	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1453347	1456574	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1456575	1456643	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1456575	1456643	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1456644	1458693	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1458694	1458812	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1458694	1458812	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1458813	1461583	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1461584	1461667	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1461584	1461667	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1461668	1462028	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1462029	1462169	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1462029	1462169	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1462170	1465314	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1465315	1465437	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:8;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1465315	1465437	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1465438	1467565	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000108:8;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1467566	1467844	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000108:9;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1467566	1467777	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000108:8;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1467775	1467777	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000108;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000108;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG04160_ch_T0000108;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1444008	1467844	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG04160_ch_T0000109;Name=ASMT
HG04160_chrY	CAT	exon	1444008	1444217	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1444149	1444217	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1444149	1444151	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG04160_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1444218	1452086	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1452087	1452261	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1452087	1452261	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1452262	1453216	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1453217	1453346	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1453217	1453346	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1453347	1456574	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1456575	1456643	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1456575	1456643	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1456644	1458693	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1458694	1458812	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1458694	1458812	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1458813	1461583	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1461584	1461667	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1461584	1461667	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1461668	1462028	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1462029	1462169	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1462029	1462169	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1462170	1465314	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1465315	1465437	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1465315	1465437	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1465438	1467565	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000109:7;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1467566	1467844	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1467566	1467777	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000109:8;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1467775	1467777	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000109;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000109;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG04160_ch_T0000109;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1444082	1467844	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG04160_ch_T0000110;Name=ASMT
HG04160_chrY	CAT	exon	1444082	1444217	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1444149	1444217	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	1444149	1444151	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG04160_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1444218	1452086	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:0;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1452087	1452261	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1452087	1452261	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1452262	1453216	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:1;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1453217	1453346	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1453217	1453346	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1453347	1456574	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:2;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1456575	1456643	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1456575	1456643	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1456644	1458693	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:3;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1458694	1458812	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1458694	1458812	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1458813	1465314	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:4;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1465315	1465437	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1465315	1465437	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1465438	1467565	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG04160_ch_T0000110:5;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1467566	1467844	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG04160_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1467566	1467777	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG04160_ch_T0000110:6;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1467775	1467777	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000110;gene_id=HG04160_ch_G0000022;Parent=HG04160_ch_T0000110;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG04160_ch_T0000110;Name=ASMT;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1558616	1582556	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG04160_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG04160_ch_G0000023;Name=LINC02968
HG04160_chrY	CAT	transcript	1558616	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000111;Name=LINC02968
HG04160_chrY	CAT	exon	1558616	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560153	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560154	1560397	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560398	1570050	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570051	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000111:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG04160_ch_T0000111;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000111:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1558670	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000112;Name=LINC02968
HG04160_chrY	CAT	exon	1558670	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560150	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560151	1560412	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560413	1568501	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1568502	1568597	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1568598	1569853	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1569854	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG04160_ch_T0000112;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000112:7;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1558753	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000113;Name=LINC02968
HG04160_chrY	CAT	exon	1558753	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560150	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560151	1560397	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560398	1568501	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1568502	1568597	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1568598	1570050	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570051	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000113:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG04160_ch_T0000113;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000113;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000113:7;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1558753	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000114;Name=LINC02968
HG04160_chrY	CAT	exon	1558753	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560150	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560151	1560397	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560398	1568501	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1568502	1568597	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1568598	1570047	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570048	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000114:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG04160_ch_T0000114;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000114;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000114:7;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1558753	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000115;Name=LINC02968
HG04160_chrY	CAT	exon	1558753	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560153	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560154	1560397	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560398	1568501	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1568502	1568597	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1568598	1570050	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570051	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000115:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG04160_ch_T0000115;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000115;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000115:7;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1558753	1582556	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG04160_ch_T0000116;Name=LINC02968
HG04160_chrY	CAT	exon	1558753	1558920	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1558921	1560150	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:0;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1560151	1560397	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1560398	1568501	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:1;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1568502	1568597	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1568598	1570158	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:2;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570159	1570264	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1570265	1570357	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:3;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1570358	1571143	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1571144	1573860	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:4;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1573861	1574113	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1574114	1577856	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:5;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1577857	1577916	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1577917	1582255	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG04160_ch_T0000116:6;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1582256	1582556	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG04160_ch_T0000116;gene_id=HG04160_ch_G0000023;Parent=HG04160_ch_T0000116;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG04160_ch_T0000116:7;Name=LINC02968;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1596505	1609803	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG04160_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG04160_ch_G0000024;Name=LOC105379413
HG04160_chrY	CAT	transcript	1596505	1609803	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG04160_ch_T0000117;Name=LOC105379413
HG04160_chrY	CAT	exon	1596505	1597081	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000117;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000117:0;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1597082	1601524	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000117;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG04160_ch_T0000117:0;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1601525	1601738	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000117;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000117:1;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1601739	1606672	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000117;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG04160_ch_T0000117:1;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1606673	1609803	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG04160_ch_T0000117;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000117;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000117:2;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	1596505	1609803	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG04160_ch_T0000118;Name=LOC105379413
HG04160_chrY	CAT	exon	1596505	1597081	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1597082	1601524	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG04160_ch_T0000118:0;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1601525	1601687	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1601688	1606672	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG04160_ch_T0000118:1;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1606673	1609803	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG04160_ch_T0000118;gene_id=HG04160_ch_G0000024;Parent=HG04160_ch_T0000118;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG04160_ch_T0000118:2;Name=LOC105379413;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1705547	1711649	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG04160_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG04160_ch_G0000025;Name=LOC107985677
HG04160_chrY	CAT	transcript	1705547	1711649	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG04160_ch_T0000119;Name=LOC107985677
HG04160_chrY	CAT	exon	1705547	1706600	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:0;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1706601	1707547	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG04160_ch_T0000119:0;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1707548	1707661	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:1;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1707662	1708150	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG04160_ch_T0000119:1;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1708151	1708286	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:2;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1708287	1709619	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG04160_ch_T0000119:2;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1709620	1709935	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:3;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1709936	1710335	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG04160_ch_T0000119:3;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1710336	1710935	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:4;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1710936	1711310	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG04160_ch_T0000119:4;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1711311	1711649	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG04160_ch_T0000119;gene_id=HG04160_ch_G0000025;Parent=HG04160_ch_T0000119;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG04160_ch_T0000119:5;Name=LOC107985677;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1859764	2142132	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG04160_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000026;Name=DHRSX
HG04160_chrY	CAT	transcript	1859764	2142132	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG04160_ch_T0000120;Name=DHRSX
HG04160_chrY	CAT	exon	1859764	1861487	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:0;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1861299	1861487	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:0;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	1861299	1861301	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG04160_ch_T0000120;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1861488	1883891	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:0;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1883892	1884099	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:1;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1883892	1884099	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:1;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1884100	1907876	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:1;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1907877	1908084	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:2;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1907877	1908084	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:2;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1908085	1927454	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:2;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1927455	1927556	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:3;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	1927455	1927556	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:3;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1927557	2049940	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:3;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2049941	2050009	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:4;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2049941	2050009	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:4;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2050010	2066395	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:4;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2066396	2066503	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:5;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2066396	2066503	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:5;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2066504	2141972	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG04160_ch_T0000120:5;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2141973	2142132	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG04160_ch_T0000120:6;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2141973	2142081	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG04160_ch_T0000120:6;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2142079	2142081	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000120;gene_id=HG04160_ch_G0000026;Parent=HG04160_ch_T0000120;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG04160_ch_T0000120;Name=DHRSX;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	1961856	1978917	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG04160_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG04160_ch_G0000027;Name=LOC124905239
HG04160_chrY	CAT	transcript	1961856	1978917	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG04160_ch_T0000121;Name=LOC124905239
HG04160_chrY	CAT	exon	1961856	1963133	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_T0000121;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG04160_ch_T0000121:0;Name=LOC124905239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1963134	1970634	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_T0000121;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG04160_ch_T0000121:0;Name=LOC124905239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1970635	1970761	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_T0000121;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG04160_ch_T0000121:1;Name=LOC124905239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	1970762	1978750	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_T0000121;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG04160_ch_T0000121:1;Name=LOC124905239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	1978751	1978917	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG04160_ch_T0000121;gene_id=HG04160_ch_G0000027;Parent=HG04160_ch_T0000121;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG04160_ch_T0000121:2;Name=LOC124905239;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2127592	2142132	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG04160_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000028;Name=ZBED1
HG04160_chrY	CAT	transcript	2127592	2141781	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG04160_ch_T0000122;Name=ZBED1
HG04160_chrY	CAT	exon	2127592	2131924	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000122:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2129787	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG04160_ch_T0000122:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2129787	2129789	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG04160_ch_T0000122;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2131869	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG04160_ch_T0000122;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2131925	2141466	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG04160_ch_T0000122:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2141467	2141781	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000122;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000122;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000122:1;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2127592	2142132	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG04160_ch_T0000123;Name=ZBED1
HG04160_chrY	CAT	exon	2127592	2131924	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2129787	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG04160_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2129787	2129789	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG04160_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2131869	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG04160_ch_T0000123;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2131925	2141972	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG04160_ch_T0000123:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2141973	2142132	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000123;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000123;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000123:1;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2127592	2142132	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG04160_ch_T0000124;Name=ZBED1
HG04160_chrY	CAT	exon	2127592	2131921	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2129787	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG04160_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2129787	2129789	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG04160_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2131869	2131871	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG04160_ch_T0000124;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2131922	2141972	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG04160_ch_T0000124:0;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2141973	2142132	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000124;gene_id=HG04160_ch_G0000028;Parent=HG04160_ch_T0000124;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG04160_ch_T0000124:1;Name=ZBED1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2207108	2250663	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG04160_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG04160_ch_G0000029;Name=LOC101928092
HG04160_chrY	CAT	transcript	2207108	2215674	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG04160_ch_T0000125;Name=LOC101928092
HG04160_chrY	CAT	exon	2207108	2208371	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000125:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2208372	2211088	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000125:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2211089	2211244	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000125:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2211245	2215136	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000125:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2215137	2215674	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG04160_ch_T0000125;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000125:2;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2207108	2215674	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG04160_ch_T0000126;Name=LOC101928092
HG04160_chrY	CAT	exon	2207108	2208371	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2208372	2211088	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000126:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2211089	2211244	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2211245	2215153	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000126:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2215154	2215674	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG04160_ch_T0000126;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000126;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000126:2;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2207108	2250595	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG04160_ch_T0000127;Name=LOC101928092
HG04160_chrY	CAT	exon	2207108	2208371	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2208372	2211088	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000127:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2211089	2211244	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2211245	2250528	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000127:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2250529	2250595	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG04160_ch_T0000127;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000127;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000127:2;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2207108	2250606	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG04160_ch_T0000128;Name=LOC101928092
HG04160_chrY	CAT	exon	2207108	2208371	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2208372	2211088	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000128:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2211089	2211244	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2211245	2215136	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000128:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2215137	2215330	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000128:2;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2215331	2250528	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000128:2;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2250529	2250606	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG04160_ch_T0000128;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000128;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000128:3;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2207108	2250663	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG04160_ch_T0000129;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG04160_ch_T0000129;Name=LOC101928092
HG04160_chrY	CAT	exon	2207108	2208371	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG04160_ch_T0000129;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2208372	2250528	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG04160_ch_T0000129;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG04160_ch_T0000129:0;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2250529	2250663	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG04160_ch_T0000129;gene_id=HG04160_ch_G0000029;Parent=HG04160_ch_T0000129;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG04160_ch_T0000129:1;Name=LOC101928092;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2250614	2250675	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG04160_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG04160_ch_G0000030;Name=MIR6089
HG04160_chrY	CAT	transcript	2250614	2250677	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG04160_ch_T0000130;gene_id=HG04160_ch_G0000030;Parent=HG04160_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG04160_ch_T0000130;Name=MIR6089
HG04160_chrY	CAT	exon	2250614	2250677	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG04160_ch_T0000130;gene_id=HG04160_ch_G0000030;Parent=HG04160_ch_T0000130;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG04160_ch_T0000130:0;Name=MIR6089;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2250652	2250675	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG04160_ch_T0000131;gene_id=HG04160_ch_G0000030;Parent=HG04160_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG04160_ch_T0000131;Name=MIR6089
HG04160_chrY	CAT	exon	2250652	2250675	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG04160_ch_T0000131;gene_id=HG04160_ch_G0000030;Parent=HG04160_ch_T0000131;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG04160_ch_T0000131:0;Name=MIR6089;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2250688	2298911	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG04160_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG04160_ch_G0000031;Name=CD99P1
HG04160_chrY	CAT	transcript	2250688	2280029	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG04160_ch_T0000132;Name=CD99P1
HG04160_chrY	CAT	exon	2250688	2250904	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:0;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2250905	2252408	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:0;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2252409	2252451	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:1;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2252452	2253564	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:1;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2253565	2253633	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:2;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2253634	2257229	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:2;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2257230	2257383	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:3;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2257384	2260152	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:3;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2260153	2260197	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:4;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2260198	2260841	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:4;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2260842	2260910	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:5;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2260911	2264109	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:5;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2264110	2264154	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:6;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2264155	2264804	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:6;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2264805	2264873	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:7;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2264874	2268016	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:7;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2268017	2268062	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:8;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2268063	2279673	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000132:8;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2279674	2280029	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG04160_ch_T0000132;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000132;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000132:9;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2250688	2298911	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG04160_ch_T0000133;Name=CD99P1
HG04160_chrY	CAT	exon	2250688	2250904	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2250905	2252408	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:0;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2252409	2252451	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2252452	2253564	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:1;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2253565	2253633	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2253634	2257229	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:2;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2257230	2257383	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2257384	2260152	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:3;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2260153	2260197	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2260198	2260841	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:4;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2260842	2260910	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2260911	2264804	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:5;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2264805	2264873	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2264874	2268016	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:6;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2268017	2268062	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2268063	2296708	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG04160_ch_T0000133:7;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2296709	2298911	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG04160_ch_T0000133;gene_id=HG04160_ch_G0000031;Parent=HG04160_ch_T0000133;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG04160_ch_T0000133:8;Name=CD99P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2254406	2256761	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG04160_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG04160_ch_G0000032;Name=LINC00102
HG04160_chrY	CAT	transcript	2254406	2256761	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG04160_ch_T0000134;gene_id=HG04160_ch_G0000032;Parent=HG04160_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG04160_ch_T0000134;Name=LINC00102
HG04160_chrY	CAT	exon	2254406	2255111	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG04160_ch_T0000134;gene_id=HG04160_ch_G0000032;Parent=HG04160_ch_T0000134;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG04160_ch_T0000134:0;Name=LINC00102;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2255112	2256130	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG04160_ch_T0000134;gene_id=HG04160_ch_G0000032;Parent=HG04160_ch_T0000134;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG04160_ch_T0000134:0;Name=LINC00102;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2256131	2256761	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG04160_ch_T0000134;gene_id=HG04160_ch_G0000032;Parent=HG04160_ch_T0000134;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG04160_ch_T0000134:1;Name=LINC00102;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2332551	2382560	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG04160_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000033;Name=CD99
HG04160_chrY	CAT	transcript	2332551	2377687	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000135;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000135;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2358850	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2358851	2358898	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2358851	2358898	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2358899	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2364560	2364610	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2374606	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2374607	2377687	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000135:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2374607	2374614	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000135:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2374612	2374614	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000135;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000135;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000136;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2364560	2364610	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2379450	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379451	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2379451	2379507	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2382030	2382055	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2382053	2382055	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000136;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000137;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2358850	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2358851	2358898	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2358851	2358898	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2358899	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2364560	2364610	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2379453	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379454	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2379454	2379507	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000137:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2382030	2382055	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000137:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2382053	2382055	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000137;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000137;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000137;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000138;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2364560	2364610	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2379453	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379454	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2379454	2379507	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000138:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2382030	2382055	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000138:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2382053	2382055	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000138;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000138;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000138;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000139;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2358850	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2358851	2358898	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2358851	2358898	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2358899	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2379450	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379451	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2379451	2379507	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000139:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2382030	2382055	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000139:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2382053	2382055	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000139;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000139;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000139;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG04160_ch_T0000140;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2332617	2332683	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2332617	2332619	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG04160_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2355667	2355699	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2358850	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2358851	2358898	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2358851	2358898	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2358899	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2360907	2360951	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2361602	2361670	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2363873	2363920	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2364560	2364610	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2367506	2367619	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2379450	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379451	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2379451	2379507	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG04160_ch_T0000140:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG04160_ch_T0000140:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2382030	2382055	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG04160_ch_T0000140:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2382053	2382055	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000140;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000140;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG04160_ch_T0000140;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2332551	2382560	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG04160_ch_T0000141;Name=CD99
HG04160_chrY	CAT	exon	2332551	2332683	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2332684	2355666	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:0;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2355667	2355699	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2355700	2358850	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:1;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2358851	2358898	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2358899	2360906	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:2;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2360907	2360951	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2360952	2361601	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:3;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2361602	2361670	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2361671	2363872	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:4;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2363873	2363920	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2363921	2364559	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:5;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2364560	2364610	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2364611	2367505	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:6;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2367506	2367619	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2367620	2374606	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:7;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2374607	2374624	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2374625	2379453	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:8;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2379454	2379507	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2379508	2382029	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG04160_ch_T0000141:9;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2382030	2382560	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000141;gene_id=HG04160_ch_G0000033;Parent=HG04160_ch_T0000141;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG04160_ch_T0000141:10;Name=CD99;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2393551	2416126	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG04160_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG04160_ch_G0000034;Name=XGY2
HG04160_chrY	CAT	transcript	2393551	2416126	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG04160_ch_T0000142;Name=XGY2
HG04160_chrY	CAT	exon	2393551	2393590	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_T0000142;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG04160_ch_T0000142:0;Name=XGY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2393591	2411791	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_T0000142;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG04160_ch_T0000142:0;Name=XGY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2411792	2411833	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_T0000142;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG04160_ch_T0000142:1;Name=XGY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2411834	2415845	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_T0000142;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG04160_ch_T0000142:1;Name=XGY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2415846	2416126	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG04160_ch_T0000142;gene_id=HG04160_ch_G0000034;Parent=HG04160_ch_T0000142;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG04160_ch_T0000142:2;Name=XGY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2427977	2428804	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG04160_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000035;Name=SRY
HG04160_chrY	CAT	transcript	2427977	2428804	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000143;gene_id=HG04160_ch_G0000035;Parent=HG04160_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG04160_ch_T0000143;Name=SRY
HG04160_chrY	CAT	exon	2427977	2428804	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000143;gene_id=HG04160_ch_G0000035;Parent=HG04160_ch_T0000143;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG04160_ch_T0000143:0;Name=SRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2428111	2428725	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000143;gene_id=HG04160_ch_G0000035;Parent=HG04160_ch_T0000143;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG04160_ch_T0000143:0;Name=SRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2428111	2428113	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000143;gene_id=HG04160_ch_G0000035;Parent=HG04160_ch_T0000143;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG04160_ch_T0000143;Name=SRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2428723	2428725	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000143;gene_id=HG04160_ch_G0000035;Parent=HG04160_ch_T0000143;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG04160_ch_T0000143;Name=SRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2482723	2508389	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG04160_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000036;Name=RPS4Y1
HG04160_chrY	CAT	transcript	2482723	2508389	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG04160_ch_T0000144;Name=RPS4Y1
HG04160_chrY	CAT	exon	2482723	2482748	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2482746	2482748	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2482746	2482748	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG04160_ch_T0000144;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2482749	2483285	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2483286	2483363	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2483286	2483363	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2483364	2485197	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2485198	2485378	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2485198	2485378	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2485379	2486766	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2486767	2486864	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2486767	2486864	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2486865	2495720	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2495721	2495892	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2495721	2495892	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2495893	2506208	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2506209	2506366	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2506209	2506366	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2506367	2507913	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000144:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2507914	2508389	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000144:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2507914	2508015	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000144:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2508013	2508015	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000144;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000144;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG04160_ch_T0000144;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2482723	2508389	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG04160_ch_T0000145;Name=RPS4Y1
HG04160_chrY	CAT	exon	2482723	2483094	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2483065	2483094	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2483065	2483067	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG04160_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2483095	2483285	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2483286	2483363	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2483286	2483363	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2483364	2485197	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2485198	2485378	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2485198	2485378	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2485379	2486766	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2486767	2486864	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2486767	2486864	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2486865	2495720	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2495721	2495892	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2495721	2495892	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2495893	2506208	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2506209	2506366	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2506209	2506366	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2506367	2507913	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG04160_ch_T0000145:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2507914	2508389	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG04160_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2507914	2508015	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG04160_ch_T0000145:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2508013	2508015	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000145;gene_id=HG04160_ch_G0000036;Parent=HG04160_ch_T0000145;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG04160_ch_T0000145;Name=RPS4Y1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2576859	2623982	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG04160_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000037;Name=ZFY
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000146;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577247	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577248	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602567	2603122	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2602567	2602569	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000146;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000147;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000147:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000147;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000148;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000148:7;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000148;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000149;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577247	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577248	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602567	2603122	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2602567	2602569	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000149;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000150;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602567	2603122	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2602567	2602569	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000150:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000150;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000151;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577113	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577114	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602567	2603122	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2602567	2602569	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000151:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000151;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000152;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577247	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577248	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000152:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000152:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000152;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000153;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000153;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000154;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602567	2603122	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2602567	2602569	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000154;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000155;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2576924	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2576925	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000155;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000156;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577247	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577248	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616636	2616720	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000156:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2616636	2616638	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000156:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000156:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000156:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000156:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000156;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000156;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000156;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000157;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577247	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577248	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000157:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000157:7;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000157:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000157;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000157;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000157;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2576859	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000158;Name=ZFY
HG04160_chrY	CAT	exon	2576859	2577113	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2577114	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000158:7;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000158:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000158;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000158;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000158;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	2587658	2623982	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG04160_ch_T0000159;Name=ZFY
HG04160_chrY	CAT	exon	2587658	2587755	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2587756	2595384	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2595385	2595473	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2595413	2595473	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:0;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	2595413	2595415	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG04160_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2595474	2602549	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2602550	2603122	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2602550	2603122	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:1;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2603123	2616570	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616571	2616720	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616571	2616720	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:2;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2616721	2616986	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2616987	2617130	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2616987	2617130	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:3;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2617131	2618145	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2618146	2618298	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2618146	2618298	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:4;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2618299	2619415	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2619416	2619556	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2619416	2619556	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:5;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2619557	2620285	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG04160_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2620286	2623982	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG04160_ch_T0000159:7;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	2620286	2621469	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG04160_ch_T0000159:6;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	2621467	2621469	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000159;gene_id=HG04160_ch_G0000037;Parent=HG04160_ch_T0000159;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG04160_ch_T0000159;Name=ZFY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2608295	2644102	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG04160_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG04160_ch_G0000038;Name=ZFY-AS1
HG04160_chrY	CAT	transcript	2608295	2644102	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG04160_ch_T0000160;Name=ZFY-AS1
HG04160_chrY	CAT	exon	2608295	2608415	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_T0000160;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG04160_ch_T0000160:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2608416	2623313	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_T0000160;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG04160_ch_T0000160:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2623314	2623403	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_T0000160;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG04160_ch_T0000160:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2623404	2643788	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_T0000160;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG04160_ch_T0000160:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2643789	2644102	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG04160_ch_T0000160;gene_id=HG04160_ch_G0000038;Parent=HG04160_ch_T0000160;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG04160_ch_T0000160:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	2644472	2743732	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG04160_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG04160_ch_G0000039;Name=LINC00278
HG04160_chrY	CAT	transcript	2644472	2743732	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG04160_ch_T0000161;Name=LINC00278
HG04160_chrY	CAT	exon	2644472	2644693	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG04160_ch_T0000161:0;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2644694	2720743	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG04160_ch_T0000161:0;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2720744	2720801	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG04160_ch_T0000161:1;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2720802	2738454	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG04160_ch_T0000161:1;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2738455	2738516	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG04160_ch_T0000161:2;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	2738517	2743544	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG04160_ch_T0000161:2;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	2743545	2743732	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG04160_ch_T0000161;gene_id=HG04160_ch_G0000039;Parent=HG04160_ch_T0000161;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG04160_ch_T0000161:3;Name=LINC00278;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	3220520	3221494	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG04160_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000040;Name=TGIF2LY
HG04160_chrY	CAT	transcript	3220520	3221494	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG04160_ch_T0000162;Name=TGIF2LY
HG04160_chrY	CAT	exon	3220520	3220580	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG04160_ch_T0000162:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3220581	3220676	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG04160_ch_T0000162:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3220677	3221494	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG04160_ch_T0000162:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	3220698	3221255	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG04160_ch_T0000162:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	3220698	3220700	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG04160_ch_T0000162;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	3221253	3221255	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000162;gene_id=HG04160_ch_G0000040;Parent=HG04160_ch_T0000162;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG04160_ch_T0000162;Name=TGIF2LY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	3442081	3476987	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG04160_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG04160_ch_G0000041;Name=LOC105377227
HG04160_chrY	CAT	transcript	3442081	3453092	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG04160_ch_T0000163;Name=LOC105377227
HG04160_chrY	CAT	exon	3442081	3445382	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000163;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000163:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445383	3445814	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000163;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000163:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3445815	3445926	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000163;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000163:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445927	3450998	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000163;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000163:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3450999	3453092	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG04160_ch_T0000163;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000163;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000163:2;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	3442081	3474465	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG04160_ch_T0000164;Name=LOC105377227
HG04160_chrY	CAT	exon	3442081	3445382	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445383	3445814	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000164:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3445815	3445926	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445927	3450998	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000164:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3450999	3451173	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000164:2;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3451174	3473835	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000164:2;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3473836	3474465	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG04160_ch_T0000164;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000164;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000164:3;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	3442081	3476987	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG04160_ch_T0000165;Name=LOC105377227
HG04160_chrY	CAT	exon	3442081	3445382	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445383	3445814	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000165:0;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3445815	3445926	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	3445927	3476892	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG04160_ch_T0000165:1;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	3476893	3476987	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG04160_ch_T0000165;gene_id=HG04160_ch_G0000041;Parent=HG04160_ch_T0000165;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG04160_ch_T0000165:2;Name=LOC105377227;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	4249836	4249874	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG04160_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG04160_ch_G0000042;Name=MIR9985
HG04160_chrY	CAT	transcript	4249836	4249946	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG04160_ch_T0000166;gene_id=HG04160_ch_G0000042;Parent=HG04160_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG04160_ch_T0000166;Name=MIR9985
HG04160_chrY	CAT	exon	4249836	4249946	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG04160_ch_T0000166;gene_id=HG04160_ch_G0000042;Parent=HG04160_ch_T0000166;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG04160_ch_T0000166:0;Name=MIR9985;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4249856	4249874	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG04160_ch_T0000167;gene_id=HG04160_ch_G0000042;Parent=HG04160_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG04160_ch_T0000167;Name=MIR9985
HG04160_chrY	CAT	exon	4249856	4249874	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG04160_ch_T0000167;gene_id=HG04160_ch_G0000042;Parent=HG04160_ch_T0000167;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG04160_ch_T0000167:0;Name=MIR9985;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	4644024	5386487	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG04160_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000043;Name=PCDH11Y
HG04160_chrY	CAT	transcript	4644024	4749343	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000168;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4674638	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4674639	4674807	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4674808	4675645	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4675646	4675751	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675752	4676409	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4676410	4676468	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4676437	4676468	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4676437	4676439	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4676469	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700629	4701199	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	4748088	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000168:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4748089	4749343	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000168:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4748089	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	4748104	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000168;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4644024	4749343	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000169;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4675645	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4675646	4675751	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675752	4676409	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4676410	4676468	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4676437	4676468	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4676437	4676439	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4676469	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700629	4701199	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	4748088	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4748089	4749343	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4748089	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	4748104	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000169;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4644024	5386483	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000170;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700840	4701199	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4700840	4700842	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	5144861	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5144862	5145060	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5144862	5145060	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5145061	5226042	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5226043	5226066	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5226043	5226066	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000170:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5226067	5381530	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5381531	5386483	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000170:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5381531	5382201	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000170:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5382199	5382201	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000170;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4644024	5386487	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000171;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4646415	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4646416	4650463	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4650464	4674638	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4674639	4674807	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4674808	4674954	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4674955	4675086	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675087	4675645	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4675646	4675751	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675752	4676409	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4676410	4676468	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4676437	4676468	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4676437	4676439	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4676469	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700629	4701199	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	5144861	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5144862	5145060	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5144862	5145060	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5145061	5226042	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5226043	5226066	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5226043	5226066	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5226067	5381530	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000171:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5381531	5386487	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000171:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5381531	5382201	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000171:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5382199	5382201	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000171;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4644024	5386487	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000172;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4674638	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4674639	4674807	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4674808	4674954	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4674955	4675086	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675087	4675645	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4675646	4675751	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675752	4676409	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4676410	4676468	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4676437	4676468	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4676437	4676439	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4676469	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700629	4701199	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	5144861	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5144862	5145060	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5144862	5145060	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5145061	5226042	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5226043	5226066	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5226043	5226066	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5226067	5381530	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000172:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5381531	5386487	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000172:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5381531	5382201	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000172:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5382199	5382201	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000172;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000172;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000172;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4644024	5386487	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000173;Name=PCDH11Y
HG04160_chrY	CAT	exon	4644024	4644333	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4644334	4646415	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4646416	4646486	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4646487	4675645	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4675646	4675751	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4675752	4676409	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4676410	4676468	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4676437	4676468	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4676437	4676439	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4676469	4700628	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4700629	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700629	4701199	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	5144861	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5144862	5145060	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5144862	5145060	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5145061	5226042	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5226043	5226066	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5226043	5226066	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5226067	5381530	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000173:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5381531	5386487	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000173:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5381531	5382201	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000173:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5382199	5382201	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000173;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000173;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000173;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4699828	4749343	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000174;Name=PCDH11Y
HG04160_chrY	CAT	exon	4699828	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700564	4701199	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4700564	4700566	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000174:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	4748088	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000174:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4748089	4749343	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4748089	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000174:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	4748104	4748106	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000174;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000174;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000174;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	4699830	5386487	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG04160_ch_T0000175;Name=PCDH11Y
HG04160_chrY	CAT	exon	4699830	4701199	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4700564	4701199	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	4700564	4700566	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG04160_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4701200	4741959	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000175:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	4741960	4744452	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	4741960	4744452	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	4744453	5144861	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000175:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5144862	5145060	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5144862	5145060	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5145061	5226042	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000175:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5226043	5226066	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5226043	5226066	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5226067	5381530	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG04160_ch_T0000175:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5381531	5386487	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG04160_ch_T0000175:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5381531	5382201	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG04160_ch_T0000175:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5382199	5382201	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000175;gene_id=HG04160_ch_G0000043;Parent=HG04160_ch_T0000175;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG04160_ch_T0000175;Name=PCDH11Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	5886695	5887859	.	-	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;gene_id=HG04160_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG04160_ch_G0000044;Name=TTTY23B
HG04160_chrY	CAT	transcript	5886695	5887859	1000	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_G0000044;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG04160_ch_T0000176;Name=TTTY23B
HG04160_chrY	CAT	exon	5886695	5887003	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_T0000176;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG04160_ch_T0000176:0;Name=TTTY23B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5887004	5887543	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_T0000176;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG04160_ch_T0000176:0;Name=TTTY23B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5887544	5887689	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_T0000176;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG04160_ch_T0000176:1;Name=TTTY23B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5887690	5887802	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_T0000176;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG04160_ch_T0000176:1;Name=TTTY23B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5887803	5887859	.	-	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG04160_ch_T0000176;gene_id=HG04160_ch_G0000044;Parent=HG04160_ch_T0000176;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG04160_ch_T0000176:2;Name=TTTY23B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	5890472	5893267	.	+	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;gene_id=HG04160_ch_G0000045;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=HG04160_ch_G0000045;Name=TSPY2
HG04160_chrY	CAT	transcript	5890472	5893267	100	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG04160_ch_T0000177;Name=TSPY2
HG04160_chrY	CAT	exon	5890472	5891003	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5890518	5891003	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000177:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	5890518	5890520	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG04160_ch_T0000177;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891004	5891604	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000177:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891605	5891682	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891605	5891682	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000177:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891683	5891810	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000177:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891811	5891922	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891811	5891922	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000177:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891923	5892023	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000177:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892024	5892169	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892024	5892169	.	+	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000177:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892170	5892264	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000177:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892265	5892357	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892265	5892327	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000177:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5892325	5892327	.	+	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG04160_ch_T0000177;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892358	5893051	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000177:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5893052	5893267	.	+	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000177;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000177;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000177:5;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	5890472	5893267	100	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG04160_ch_T0000178;Name=TSPY2
HG04160_chrY	CAT	exon	5890472	5891003	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5890518	5891003	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000178:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	5890518	5890520	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG04160_ch_T0000178;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891004	5891604	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000178:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891605	5891682	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891605	5891682	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000178:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891683	5891810	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000178:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891811	5891922	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891811	5891922	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000178:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891923	5892030	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000178:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892031	5892169	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892031	5892169	.	+	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000178:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892170	5892275	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000178:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892276	5892357	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892276	5892327	.	+	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000178:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5892325	5892327	.	+	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG04160_ch_T0000178;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892358	5893051	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000178:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5893052	5893267	.	+	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000178;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000178;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000178:5;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	5890472	5893267	100	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_G0000045;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG04160_ch_T0000179;Name=TSPY2
HG04160_chrY	CAT	exon	5890472	5891003	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5890518	5891003	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	5890518	5890520	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG04160_ch_T0000179;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891004	5891604	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000179:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891605	5891682	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891605	5891682	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891683	5891810	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000179:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891811	5891922	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5891811	5891922	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891923	5892023	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000179:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892024	5892169	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892024	5892169	.	+	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892170	5892275	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000179:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892276	5892357	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5892276	5892357	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892358	5893051	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG04160_ch_T0000179:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5893052	5893267	.	+	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000179:5;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	5893052	5893074	.	+	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000179:5;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	5893072	5893074	.	+	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000179;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000179;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG04160_ch_T0000179;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	5890472	5893267	1000	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_G0000045;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG04160_ch_T0000180;Name=TSPY2
HG04160_chrY	CAT	exon	5890472	5891003	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891004	5891604	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG04160_ch_T0000180:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891605	5891682	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891683	5891810	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG04160_ch_T0000180:1;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5891811	5891922	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5891923	5892030	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG04160_ch_T0000180:2;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892031	5892169	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892170	5892264	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG04160_ch_T0000180:3;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5892265	5892357	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5892358	5893051	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG04160_ch_T0000180:4;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5893052	5893267	.	+	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=HG04160_ch_T0000180;gene_id=HG04160_ch_G0000045;Parent=HG04160_ch_T0000180;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG04160_ch_T0000180:5;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	5902582	5908185	.	-	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1;gene_id=HG04160_ch_G0000046;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG04160_ch_G0000046;Name=FAM197Y9
HG04160_chrY	CAT	transcript	5902582	5908185	1000	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_G0000046;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG04160_ch_T0000181;Name=FAM197Y9
HG04160_chrY	CAT	exon	5902582	5902641	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG04160_ch_T0000181:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5902642	5906192	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG04160_ch_T0000181:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5906193	5906351	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG04160_ch_T0000181:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5906352	5907851	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG04160_ch_T0000181:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5907852	5907997	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG04160_ch_T0000181:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	5907998	5908083	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG04160_ch_T0000181:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	5908084	5908185	.	-	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1;transcript_id=HG04160_ch_T0000181;gene_id=HG04160_ch_G0000046;Parent=HG04160_ch_T0000181;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG04160_ch_T0000181:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6001502	6005703	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1;gene_id=HG04160_ch_G0000047;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG04160_ch_G0000047;Name=LINC00280
HG04160_chrY	CAT	transcript	6001502	6005703	1000	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_G0000047;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG04160_ch_T0000182;Name=LINC00280
HG04160_chrY	CAT	exon	6001502	6001720	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_T0000182;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000182:0;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6001721	6002973	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_T0000182;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG04160_ch_T0000182:0;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6002974	6003116	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_T0000182;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000182:1;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6003117	6005617	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_T0000182;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG04160_ch_T0000182:1;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6005618	6005703	.	-	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1;transcript_id=HG04160_ch_T0000182;gene_id=HG04160_ch_G0000047;Parent=HG04160_ch_T0000182;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000182:2;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6010801	6014212	.	-	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;gene_id=HG04160_ch_G0000048;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG04160_ch_G0000048;Name=LOC107987353
HG04160_chrY	CAT	transcript	6010801	6014212	1000	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_G0000048;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG04160_ch_T0000183;Name=LOC107987353
HG04160_chrY	CAT	exon	6010801	6011063	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_T0000183;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG04160_ch_T0000183:0;Name=LOC107987353;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6011064	6013594	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_T0000183;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG04160_ch_T0000183:0;Name=LOC107987353;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6013595	6013667	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_T0000183;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG04160_ch_T0000183:1;Name=LOC107987353;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6013668	6014043	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_T0000183;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG04160_ch_T0000183:1;Name=LOC107987353;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6014044	6014212	.	-	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;transcript_id=HG04160_ch_T0000183;gene_id=HG04160_ch_G0000048;Parent=HG04160_ch_T0000183;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG04160_ch_T0000183:2;Name=LOC107987353;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6034693	6055856	.	+	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;gene_id=HG04160_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG04160_ch_G0000049;Name=TTTY1B
HG04160_chrY	CAT	transcript	6034693	6055856	1000	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_G0000049;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG04160_ch_T0000184;Name=TTTY1B
HG04160_chrY	CAT	exon	6034693	6034967	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG04160_ch_T0000184:0;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6034968	6038391	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG04160_ch_T0000184:0;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6038392	6038551	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG04160_ch_T0000184:1;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6038552	6045414	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG04160_ch_T0000184:1;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6045415	6045523	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG04160_ch_T0000184:2;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6045524	6047879	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG04160_ch_T0000184:2;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6047880	6048017	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG04160_ch_T0000184:3;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6048018	6055598	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG04160_ch_T0000184:3;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6055599	6055856	.	+	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG04160_ch_T0000184;gene_id=HG04160_ch_G0000049;Parent=HG04160_ch_T0000184;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG04160_ch_T0000184:4;Name=TTTY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6050536	6072737	.	-	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;gene_id=HG04160_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG04160_ch_G0000050;Name=TTTY2
HG04160_chrY	CAT	transcript	6050536	6072737	1000	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_G0000050;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG04160_ch_T0000185;Name=TTTY2
HG04160_chrY	CAT	exon	6050536	6051215	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:0;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6051216	6052438	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:0;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6052439	6052636	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:1;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6052637	6052756	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:1;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6052757	6052835	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:2;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6052836	6055665	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:2;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6055666	6055822	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:3;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6055823	6056514	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:3;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6056515	6056663	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:4;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6056664	6064057	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:4;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6064058	6064144	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:5;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6064145	6066620	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:5;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6066621	6066698	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:6;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6066699	6072532	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG04160_ch_T0000185:6;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6072533	6072737	.	-	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG04160_ch_T0000185;gene_id=HG04160_ch_G0000050;Parent=HG04160_ch_T0000185;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG04160_ch_T0000185:7;Name=TTTY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6087727	6091370	.	+	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;gene_id=HG04160_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG04160_ch_G0000051;Name=TTTY21B
HG04160_chrY	CAT	transcript	6087727	6091370	1000	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;transcript_id=HG04160_ch_T0000186;gene_id=HG04160_ch_G0000051;Parent=HG04160_ch_G0000051;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG04160_ch_T0000186;Name=TTTY21B
HG04160_chrY	CAT	exon	6087727	6087928	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;transcript_id=HG04160_ch_T0000186;gene_id=HG04160_ch_G0000051;Parent=HG04160_ch_T0000186;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG04160_ch_T0000186:0;Name=TTTY21B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6087929	6091265	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;transcript_id=HG04160_ch_T0000186;gene_id=HG04160_ch_G0000051;Parent=HG04160_ch_T0000186;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG04160_ch_T0000186:0;Name=TTTY21B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6091266	6091370	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;transcript_id=HG04160_ch_T0000186;gene_id=HG04160_ch_G0000051;Parent=HG04160_ch_T0000186;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG04160_ch_T0000186:1;Name=TTTY21B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6093761	6102199	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;gene_id=HG04160_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG04160_ch_G0000052;Name=TTTY7
HG04160_chrY	CAT	transcript	6093761	6102199	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_G0000052;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG04160_ch_T0000187;Name=TTTY7
HG04160_chrY	CAT	exon	6093761	6093797	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:0;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6093798	6094738	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:0;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6094739	6094900	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:1;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6094901	6097207	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:1;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6097208	6097282	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:2;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6097283	6097970	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:2;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6097971	6098447	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:3;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6098448	6100364	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:3;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6100365	6100478	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:4;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6100479	6101451	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:4;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6101452	6101707	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:5;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6101708	6101953	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG04160_ch_T0000187:5;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6101954	6102199	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;transcript_id=HG04160_ch_T0000187;gene_id=HG04160_ch_G0000052;Parent=HG04160_ch_T0000187;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG04160_ch_T0000187:6;Name=TTTY7;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6115318	6117917	.	-	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1;gene_id=HG04160_ch_G0000053;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG04160_ch_G0000053;Name=TTTY8
HG04160_chrY	CAT	transcript	6115318	6117917	1000	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_G0000053;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG04160_ch_T0000188;Name=TTTY8
HG04160_chrY	CAT	exon	6115318	6115507	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_T0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG04160_ch_T0000188:0;Name=TTTY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6115508	6117099	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_T0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG04160_ch_T0000188:0;Name=TTTY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6117100	6117304	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_T0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG04160_ch_T0000188:1;Name=TTTY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6117305	6117781	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_T0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG04160_ch_T0000188:1;Name=TTTY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6117782	6117917	.	-	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1;transcript_id=HG04160_ch_T0000188;gene_id=HG04160_ch_G0000053;Parent=HG04160_ch_T0000188;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG04160_ch_T0000188:2;Name=TTTY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6193861	6198293	.	+	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1;gene_id=HG04160_ch_G0000054;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG04160_ch_G0000054;Name=RBMY3AP
HG04160_chrY	CAT	transcript	6193861	6198293	1000	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_G0000054;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG04160_ch_T0000189;Name=RBMY3AP
HG04160_chrY	CAT	exon	6193861	6193924	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_T0000189;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG04160_ch_T0000189:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6193925	6194130	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_T0000189;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG04160_ch_T0000189:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6194131	6194232	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_T0000189;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG04160_ch_T0000189:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6194233	6198142	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_T0000189;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG04160_ch_T0000189:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6198143	6198293	.	+	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1;transcript_id=HG04160_ch_T0000189;gene_id=HG04160_ch_G0000054;Parent=HG04160_ch_T0000189;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG04160_ch_T0000189:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6263476	6269004	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_219;gene_id=HG04160_ch_G0000055;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=transMap;ID=HG04160_ch_G0000055;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6263476	6269004	1000	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_G0000055;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000190;Name=FAM197Y2
HG04160_chrY	CAT	exon	6263476	6263666	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000190:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6263667	6263752	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000190:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6263753	6263898	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000190:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6263899	6265355	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000190:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6265356	6265441	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000190:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6265442	6265829	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000190:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6265830	6265895	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000190:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6265896	6268944	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000190:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6268945	6269004	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=267.446;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000190;gene_id=HG04160_ch_G0000055;Parent=HG04160_ch_T0000190;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000190:4;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6278346	6281158	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;gene_id=HG04160_ch_G0000056;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=augTM,transMap;ID=HG04160_ch_G0000056;Name=TSPY10
HG04160_chrY	CAT	transcript	6278346	6281158	9890	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_G0000056;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG04160_ch_T0000191;Name=TSPY10
HG04160_chrY	CAT	exon	6278346	6278556	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6278557	6279248	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000191:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279249	6279330	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6279279	6279330	.	-	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000191:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6279279	6279281	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000191;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279331	6279436	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000191:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279437	6279575	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6279437	6279575	.	-	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000191:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279576	6279683	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000191:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279684	6279795	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6279684	6279795	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000191:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279796	6279923	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000191:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279924	6280001	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6279924	6280001	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000191:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6280002	6280608	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000191:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6280609	6281158	.	-	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000191:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6280609	6281112	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000191:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6281110	6281112	.	-	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=297.74;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000191;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000191;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000191;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6278346	6281158	1000	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_G0000056;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG04160_ch_T0000192;Name=TSPY10
HG04160_chrY	CAT	exon	6278346	6278556	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6278557	6279248	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000192:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279249	6279341	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279342	6279436	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000192:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279437	6279575	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279576	6279683	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000192:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279684	6279795	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6279796	6279923	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000192:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6279924	6280001	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6280002	6280608	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000192:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6280609	6281158	.	-	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=299.65700000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000192;gene_id=HG04160_ch_G0000056;Parent=HG04160_ch_T0000192;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000192:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6283682	6289375	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_227;gene_id=HG04160_ch_G0000057;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000057;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6283682	6289375	1000	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_G0000057;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000193;Name=FAM197Y2
HG04160_chrY	CAT	exon	6283682	6283872	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000193:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6283873	6283958	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000193:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6283959	6284104	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000193:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6284105	6285606	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000193:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6285607	6285765	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000193:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6285766	6289315	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000193:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6289316	6289375	.	+	.	source_transcript=hg002_chrY_paternal_227.1;source_transcript_name=hg002_chrY_paternal_227.1;source_gene=hg002_chrY_paternal_227;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_227;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_227.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_227.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000193;gene_id=HG04160_ch_G0000057;Parent=HG04160_ch_T0000193;transcript_name=hg002_chrY_paternal_227.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000193:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6298647	6301461	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_236.3;gene_id=HG04160_ch_G0000058;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=augTM,transMap;ID=HG04160_ch_G0000058;Name=TSPY4
HG04160_chrY	CAT	transcript	6298647	6301461	9970	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_G0000058;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG04160_ch_T0000194;Name=TSPY4
HG04160_chrY	CAT	exon	6298647	6298857	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6298858	6299551	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000194:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299552	6299633	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6299582	6299633	.	-	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000194:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6299582	6299584	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000194;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6299634	6299739	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000194:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299740	6299878	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6299740	6299878	.	-	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000194:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6299879	6299986	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000194:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299987	6300098	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6299987	6300098	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000194:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6300099	6300226	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000194:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6300227	6300304	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6300227	6300304	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000194:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6300305	6300911	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000194:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6300912	6301461	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000194:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6300912	6301415	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000194:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6301413	6301415	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000194;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000194;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000194;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6298647	6301461	1000	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_G0000058;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG04160_ch_T0000195;Name=TSPY4
HG04160_chrY	CAT	exon	6298647	6298857	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6298858	6299551	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000195:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299552	6299644	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6299645	6299739	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000195:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299740	6299878	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6299879	6299986	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000195:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6299987	6300098	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6300099	6300226	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000195:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6300227	6300304	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6300305	6300911	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000195:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6300912	6301461	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000195;gene_id=HG04160_ch_G0000058;Parent=HG04160_ch_T0000195;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000195:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6304074	6309662	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;alternative_source_transcripts=hg002_chrY_paternal_205.1;gene_id=HG04160_ch_G0000059;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000059;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6304074	6309662	1000	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_G0000059;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000196;Name=FAM197Y3
HG04160_chrY	CAT	exon	6304074	6304175	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000196:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6304176	6304261	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000196:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6304262	6304407	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000196:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6304408	6305894	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000196:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6305895	6306053	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000196:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6306054	6309602	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000196:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6309603	6309662	.	+	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_205.1;transcript_id=HG04160_ch_T0000196;gene_id=HG04160_ch_G0000059;Parent=HG04160_ch_T0000196;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000196:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6318920	6321734	.	-	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_204;alternative_source_transcripts=hg002_chrY_paternal_234.4;gene_id=HG04160_ch_G0000060;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=HG04160_ch_G0000060;Name=TSPY3
HG04160_chrY	CAT	transcript	6318920	6321734	1000	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_G0000060;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=HG04160_ch_T0000197;Name=TSPY3
HG04160_chrY	CAT	exon	6318920	6319130	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6319131	6319824	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000197:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6319825	6319917	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6319918	6320012	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000197:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6320013	6320151	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6320152	6320259	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000197:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6320260	6320371	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6320372	6320499	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000197:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6320500	6320577	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6320578	6321184	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000197:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6321185	6321734	.	-	.	source_transcript=hg002_chrY_paternal_204.4;source_transcript_name=hg002_chrY_paternal_204.4;source_gene=hg002_chrY_paternal_204;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_204;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_204.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_204.4;transcript_score=299.914;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000197;gene_id=HG04160_ch_G0000060;Parent=HG04160_ch_T0000197;transcript_name=hg002_chrY_paternal_204.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000197:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6324347	6329935	.	+	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;alternative_source_transcripts=hg002_chrY_paternal_203.1;gene_id=HG04160_ch_G0000061;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG04160_ch_G0000061;Name=FAM197Y7
HG04160_chrY	CAT	transcript	6324347	6329935	1000	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_G0000061;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG04160_ch_T0000198;Name=FAM197Y7
HG04160_chrY	CAT	exon	6324347	6324448	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG04160_ch_T0000198:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6324449	6324534	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG04160_ch_T0000198:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6324535	6324680	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG04160_ch_T0000198:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6324681	6326167	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG04160_ch_T0000198:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6326168	6326326	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG04160_ch_T0000198:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6326327	6329875	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG04160_ch_T0000198:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6329876	6329935	.	+	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_203.1;transcript_id=HG04160_ch_T0000198;gene_id=HG04160_ch_G0000061;Parent=HG04160_ch_T0000198;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG04160_ch_T0000198:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6344559	6350243	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_219;alternative_source_transcripts=hg002_chrY_paternal_231.1;gene_id=HG04160_ch_G0000062;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000062;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6344559	6350243	1000	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_G0000062;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000199;Name=FAM197Y2
HG04160_chrY	CAT	exon	6344559	6344749	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000199:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6344750	6344835	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000199:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6344836	6344981	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000199:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6344982	6346475	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000199:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6346476	6346634	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000199:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6346635	6350183	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000199:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6350184	6350243	.	+	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1;transcript_id=HG04160_ch_T0000199;gene_id=HG04160_ch_G0000062;Parent=HG04160_ch_T0000199;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000199:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6359526	6362322	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;gene_id=HG04160_ch_G0000063;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG04160_ch_G0000063;Name=TSPY1
HG04160_chrY	CAT	transcript	6359526	6362322	100	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_G0000063;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG04160_ch_T0000200;Name=TSPY1
HG04160_chrY	CAT	exon	6359526	6359736	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6359714	6359736	.	-	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6359714	6359716	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000200;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6359737	6360430	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000200:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360431	6360512	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360431	6360512	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360513	6360618	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000200:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360619	6360764	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360619	6360764	.	-	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360765	6360865	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000200:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360866	6360977	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360866	6360977	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360978	6361105	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000200:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361106	6361183	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361106	6361183	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361184	6361790	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000200:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361791	6362322	.	-	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000200:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361791	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000200:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6362274	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.1,hg002_chrY_paternal_230.3;transcript_id=HG04160_ch_T0000200;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000200;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000200;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6359526	6362322	100	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_G0000063;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG04160_ch_T0000201;Name=TSPY1
HG04160_chrY	CAT	exon	6359526	6359736	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6359737	6360430	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000201:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360431	6360523	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360461	6360523	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000201:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6360461	6360463	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000201;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360524	6360618	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000201:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360619	6360764	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360619	6360764	.	-	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000201:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360765	6360865	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000201:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360866	6360977	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360866	6360977	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000201:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360978	6361105	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000201:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361106	6361183	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361106	6361183	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000201:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361184	6361790	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000201:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361791	6362322	.	-	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000201:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361791	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000201:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6362274	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.2,hg002_chrY_paternal_230.1;transcript_id=HG04160_ch_T0000201;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000201;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000201;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6359526	6362322	100	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_G0000063;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG04160_ch_T0000202;Name=TSPY1
HG04160_chrY	CAT	exon	6359526	6359736	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6359737	6360430	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000202:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360431	6360512	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360461	6360512	.	-	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000202:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6360461	6360463	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000202;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360513	6360618	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000202:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360619	6360757	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360619	6360757	.	-	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000202:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360758	6360865	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000202:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360866	6360977	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360866	6360977	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000202:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360978	6361105	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000202:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361106	6361183	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361106	6361183	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000202:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361184	6361790	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000202:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361791	6362322	.	-	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000202:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361791	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000202:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6362274	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.3,hg002_chrY_paternal_230.4;transcript_id=HG04160_ch_T0000202;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000202;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000202;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6359526	6362322	1000	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_G0000063;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG04160_ch_T0000203;Name=TSPY1
HG04160_chrY	CAT	exon	6359526	6359736	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6359737	6360430	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000203:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360431	6360523	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360524	6360618	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000203:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360619	6360757	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360758	6360865	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000203:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360866	6360977	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360978	6361105	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000203:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361106	6361183	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361184	6361790	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000203:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361791	6362322	.	-	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_200.4,hg002_chrY_paternal_230.5;transcript_id=HG04160_ch_T0000203;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000203;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000203:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6359526	6362322	100	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_G0000063;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG04160_ch_T0000204;Name=TSPY1
HG04160_chrY	CAT	exon	6359526	6359736	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6359714	6359736	.	-	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6359714	6359716	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000204;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6359737	6360430	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360431	6360512	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360431	6360512	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360513	6360618	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360619	6360764	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360619	6360764	.	-	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360765	6360865	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6360866	6360977	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6360866	6360977	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6360978	6361105	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361106	6361183	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361106	6361183	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361184	6361790	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6361791	6361928	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6361791	6361928	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6361929	6362189	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000204:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6362190	6362322	.	-	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000204:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6362190	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000204:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6362274	6362276	.	-	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2;transcript_id=HG04160_ch_T0000204;gene_id=HG04160_ch_G0000063;Parent=HG04160_ch_T0000204;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000204;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6364847	6370537	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_229.1;gene_id=HG04160_ch_G0000064;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000064;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6364847	6370537	1000	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_G0000064;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000205;Name=FAM197Y2
HG04160_chrY	CAT	exon	6364847	6365037	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000205:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6365038	6365123	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000205:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6365124	6365269	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000205:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6365270	6366767	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000205:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6366768	6366926	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000205:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6366927	6370477	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000205:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6370478	6370537	.	+	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1;transcript_id=HG04160_ch_T0000205;gene_id=HG04160_ch_G0000064;Parent=HG04160_ch_T0000205;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000205:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6379841	6382638	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;gene_id=HG04160_ch_G0000065;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG04160_ch_G0000065;Name=TSPY1
HG04160_chrY	CAT	transcript	6379841	6382638	9960	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_G0000065;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG04160_ch_T0000206;Name=TSPY1
HG04160_chrY	CAT	exon	6379841	6380052	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6380030	6380052	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6380030	6380032	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000206;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6380053	6380746	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6380747	6380828	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6380747	6380828	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6380829	6380934	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6380935	6381080	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6380935	6381080	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6381081	6381181	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6381182	6381293	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6381182	6381293	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6381294	6381421	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6381422	6381499	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6381422	6381499	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6381500	6382106	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6382107	6382244	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6382107	6382244	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6382245	6382505	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000206:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6382506	6382638	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000206:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6382506	6382592	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000206:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6382590	6382592	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000206;gene_id=HG04160_ch_G0000065;Parent=HG04160_ch_T0000206;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000206;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6385162	6390864	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;alternative_source_transcripts=hg002_chrY_paternal_227.1;gene_id=HG04160_ch_G0000066;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000066;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6385162	6390864	1000	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_G0000066;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000207;Name=FAM197Y2
HG04160_chrY	CAT	exon	6385162	6385352	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000207:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6385353	6385438	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000207:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6385439	6385584	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000207:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6385585	6387090	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000207:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6387091	6387249	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000207:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6387250	6390804	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000207:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6390805	6390864	.	+	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_227.1;transcript_id=HG04160_ch_T0000207;gene_id=HG04160_ch_G0000066;Parent=HG04160_ch_T0000207;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000207:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6400134	6402930	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;gene_id=HG04160_ch_G0000067;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG04160_ch_G0000067;Name=TSPY1
HG04160_chrY	CAT	transcript	6400134	6402930	100	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_G0000067;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG04160_ch_T0000208;Name=TSPY1
HG04160_chrY	CAT	exon	6400134	6400344	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6400345	6401038	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000208:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401039	6401131	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401069	6401131	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000208:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6401069	6401071	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000208;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401132	6401226	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000208:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401227	6401372	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401227	6401372	.	-	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000208:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401373	6401473	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000208:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401474	6401585	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401474	6401585	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000208:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401586	6401713	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000208:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401714	6401791	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401714	6401791	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000208:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401792	6402398	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000208:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402399	6402930	.	-	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000208:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6402399	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000208:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6402882	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.1,hg002_chrY_paternal_226.2;transcript_id=HG04160_ch_T0000208;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000208;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000208;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6400134	6402930	100	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_G0000067;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG04160_ch_T0000209;Name=TSPY1
HG04160_chrY	CAT	exon	6400134	6400344	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6400322	6400344	.	-	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6400322	6400324	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000209;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6400345	6401038	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401039	6401120	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401039	6401120	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401121	6401226	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401227	6401372	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401227	6401372	.	-	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401373	6401473	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401474	6401585	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401474	6401585	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401586	6401713	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401714	6401791	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401714	6401791	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401792	6402398	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402399	6402536	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6402399	6402536	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6402537	6402797	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000209:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402798	6402930	.	-	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000209:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6402798	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000209:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6402882	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000209;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000209;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000209;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6400134	6402930	100	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_G0000067;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG04160_ch_T0000210;Name=TSPY1
HG04160_chrY	CAT	exon	6400134	6400344	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6400322	6400344	.	-	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6400322	6400324	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000210;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6400345	6401038	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000210:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401039	6401120	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401039	6401120	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401121	6401226	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000210:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401227	6401372	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401227	6401372	.	-	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401373	6401473	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000210:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401474	6401585	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401474	6401585	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401586	6401713	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000210:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401714	6401791	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401714	6401791	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401792	6402398	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000210:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402399	6402930	.	-	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000210:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6402399	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000210:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6402882	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.3,hg002_chrY_paternal_226.1;transcript_id=HG04160_ch_T0000210;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000210;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000210;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6400134	6402930	100	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_G0000067;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG04160_ch_T0000211;Name=TSPY1
HG04160_chrY	CAT	exon	6400134	6400344	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6400345	6401038	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000211:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401039	6401120	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401069	6401120	.	-	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000211:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6401069	6401071	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000211;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401121	6401226	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000211:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401227	6401365	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401227	6401365	.	-	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000211:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401366	6401473	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000211:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401474	6401585	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401474	6401585	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000211:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401586	6401713	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000211:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401714	6401791	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6401714	6401791	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000211:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401792	6402398	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000211:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402399	6402930	.	-	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000211:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6402399	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000211:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6402882	6402884	.	-	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.4,hg002_chrY_paternal_226.3;transcript_id=HG04160_ch_T0000211;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000211;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000211;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6400134	6402930	1000	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_G0000067;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG04160_ch_T0000212;Name=TSPY1
HG04160_chrY	CAT	exon	6400134	6400344	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6400345	6401038	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000212:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401039	6401131	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401132	6401226	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000212:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401227	6401365	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401366	6401473	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000212:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401474	6401585	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401586	6401713	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000212:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6401714	6401791	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6401792	6402398	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000212:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6402399	6402930	.	-	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.5,hg002_chrY_paternal_226.4;transcript_id=HG04160_ch_T0000212;gene_id=HG04160_ch_G0000067;Parent=HG04160_ch_T0000212;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000212:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6405543	6411144	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_225.1;gene_id=HG04160_ch_G0000068;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000068;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6405543	6411144	1000	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_G0000068;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000213;Name=FAM197Y3
HG04160_chrY	CAT	exon	6405543	6405644	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000213:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6405645	6405730	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000213:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6405731	6405876	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000213:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6405877	6407374	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000213:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6407375	6407533	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000213:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6407534	6411084	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000213:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6411085	6411144	.	+	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1;transcript_id=HG04160_ch_T0000213;gene_id=HG04160_ch_G0000068;Parent=HG04160_ch_T0000213;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000213:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6420415	6423211	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;gene_id=HG04160_ch_G0000069;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG04160_ch_G0000069;Name=TSPY10
HG04160_chrY	CAT	transcript	6420415	6423211	100	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_G0000069;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG04160_ch_T0000214;Name=TSPY10
HG04160_chrY	CAT	exon	6420415	6420625	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6420603	6420625	.	-	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6420603	6420605	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000214;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6420626	6421319	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000214:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421320	6421401	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421320	6421401	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421402	6421507	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000214:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421508	6421653	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421508	6421653	.	-	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421654	6421754	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000214:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421755	6421866	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421755	6421866	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421867	6421994	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000214:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421995	6422072	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421995	6422072	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6422073	6422679	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000214:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6422680	6423211	.	-	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000214:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6422680	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000214:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6423163	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_224.1;transcript_id=HG04160_ch_T0000214;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000214;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000214;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6420415	6423211	100	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_G0000069;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG04160_ch_T0000215;Name=TSPY10
HG04160_chrY	CAT	exon	6420415	6420625	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6420626	6421319	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000215:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421320	6421412	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421350	6421412	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000215:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6421350	6421352	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000215;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421413	6421507	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000215:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421508	6421653	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421508	6421653	.	-	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000215:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421654	6421754	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000215:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421755	6421866	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421755	6421866	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000215:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421867	6421994	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000215:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421995	6422072	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421995	6422072	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000215:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6422073	6422679	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000215:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6422680	6423211	.	-	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000215:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6422680	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000215:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6423163	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_224.2;transcript_id=HG04160_ch_T0000215;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000215;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000215;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6420415	6423211	100	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_G0000069;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG04160_ch_T0000216;Name=TSPY10
HG04160_chrY	CAT	exon	6420415	6420625	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6420626	6421319	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000216:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421320	6421401	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421350	6421401	.	-	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000216:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6421350	6421352	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000216;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421402	6421507	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000216:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421508	6421646	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421508	6421646	.	-	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000216:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421647	6421754	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000216:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421755	6421866	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421755	6421866	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000216:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421867	6421994	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000216:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421995	6422072	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6421995	6422072	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000216:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6422073	6422679	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000216:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6422680	6423211	.	-	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000216:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6422680	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000216:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6423163	6423165	.	-	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG04160_ch_T0000216;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000216;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000216;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6420415	6423211	1000	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_G0000069;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG04160_ch_T0000217;Name=TSPY10
HG04160_chrY	CAT	exon	6420415	6420625	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6420626	6421319	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000217:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421320	6421412	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421413	6421507	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000217:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421508	6421646	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421647	6421754	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000217:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421755	6421866	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6421867	6421994	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000217:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6421995	6422072	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6422073	6422679	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000217:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6422680	6423211	.	-	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG04160_ch_T0000217;gene_id=HG04160_ch_G0000069;Parent=HG04160_ch_T0000217;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000217:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6425824	6431436	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_199;alternative_source_transcripts=hg002_chrY_paternal_223.1;gene_id=HG04160_ch_G0000070;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000070;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6425824	6431436	1000	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_G0000070;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000218;Name=FAM197Y3
HG04160_chrY	CAT	exon	6425824	6425925	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000218:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6425926	6426011	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000218:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6426012	6426157	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000218:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6426158	6427667	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000218:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6427668	6427826	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000218:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6427827	6431376	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000218:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6431377	6431436	.	+	.	source_transcript=hg002_chrY_paternal_199.1;source_transcript_name=hg002_chrY_paternal_199.1;source_gene=hg002_chrY_paternal_199;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_199;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_199.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_223.1;transcript_id=HG04160_ch_T0000218;gene_id=HG04160_ch_G0000070;Parent=HG04160_ch_T0000218;transcript_name=hg002_chrY_paternal_199.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000218:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6440708	6443522	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;gene_id=HG04160_ch_G0000071;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG04160_ch_G0000071;Name=TSPY4
HG04160_chrY	CAT	transcript	6440708	6443522	9980	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_G0000071;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG04160_ch_T0000219;Name=TSPY4
HG04160_chrY	CAT	exon	6440708	6440918	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6440896	6440918	.	-	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6440896	6440898	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000219;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6440919	6441612	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000219:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441613	6441694	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441613	6441694	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441695	6441800	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000219:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441801	6441946	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441801	6441946	.	-	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441947	6442047	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000219:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442048	6442159	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442048	6442159	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442160	6442287	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000219:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442288	6442365	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442288	6442365	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442366	6442972	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000219:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442973	6443522	.	-	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000219:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442973	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000219:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6443474	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_222.1;transcript_id=HG04160_ch_T0000219;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000219;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000219;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6440708	6443522	9980	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_G0000071;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG04160_ch_T0000220;Name=TSPY4
HG04160_chrY	CAT	exon	6440708	6440918	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6440919	6441612	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000220:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441613	6441705	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441643	6441705	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000220:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6441643	6441645	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000220;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441706	6441800	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000220:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441801	6441946	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441801	6441946	.	-	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000220:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441947	6442047	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000220:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442048	6442159	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442048	6442159	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000220:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442160	6442287	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000220:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442288	6442365	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442288	6442365	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000220:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442366	6442972	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000220:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442973	6443522	.	-	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000220:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442973	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000220:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6443474	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_222.2;transcript_id=HG04160_ch_T0000220;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000220;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000220;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6440708	6443522	9980	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_G0000071;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG04160_ch_T0000221;Name=TSPY4
HG04160_chrY	CAT	exon	6440708	6440918	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6440919	6441612	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000221:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441613	6441694	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441643	6441694	.	-	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000221:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6441643	6441645	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000221;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441695	6441800	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000221:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441801	6441939	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6441801	6441939	.	-	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000221:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441940	6442047	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000221:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442048	6442159	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442048	6442159	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000221:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442160	6442287	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000221:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442288	6442365	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442288	6442365	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000221:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442366	6442972	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000221:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442973	6443522	.	-	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000221:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6442973	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000221:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6443474	6443476	.	-	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_222.3;transcript_id=HG04160_ch_T0000221;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000221;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000221;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6440708	6443522	1000	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_G0000071;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG04160_ch_T0000222;Name=TSPY4
HG04160_chrY	CAT	exon	6440708	6440918	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6440919	6441612	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000222:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441613	6441705	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441706	6441800	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000222:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6441801	6441939	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6441940	6442047	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000222:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442048	6442159	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442160	6442287	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000222:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442288	6442365	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6442366	6442972	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000222:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6442973	6443522	.	-	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_192.4,hg002_chrY_paternal_222.4;transcript_id=HG04160_ch_T0000222;gene_id=HG04160_ch_G0000071;Parent=HG04160_ch_T0000222;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000222:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6446046	6451738	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;gene_id=HG04160_ch_G0000072;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000072;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6446046	6451738	1000	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_G0000072;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000223;Name=FAM197Y2
HG04160_chrY	CAT	exon	6446046	6446236	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000223:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6446237	6446322	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000223:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6446323	6446468	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000223:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6446469	6447970	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000223:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6447971	6448129	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000223:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6448130	6451678	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000223:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6451679	6451738	.	+	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_221.1;transcript_id=HG04160_ch_T0000223;gene_id=HG04160_ch_G0000072;Parent=HG04160_ch_T0000223;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000223:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6461029	6463825	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;gene_id=HG04160_ch_G0000073;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG04160_ch_G0000073;Name=TSPY1
HG04160_chrY	CAT	transcript	6461029	6463825	100	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_G0000073;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG04160_ch_T0000224;Name=TSPY1
HG04160_chrY	CAT	exon	6461029	6461239	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461217	6461239	.	-	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6461217	6461219	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000224;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6461240	6461933	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000224:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6461934	6462015	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461934	6462015	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462016	6462121	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000224:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462122	6462267	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462122	6462267	.	-	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462268	6462368	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000224:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462369	6462480	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462369	6462480	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462481	6462608	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000224:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462609	6462686	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462609	6462686	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462687	6463293	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000224:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463294	6463825	.	-	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000224:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6463294	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000224:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6463777	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_220.3;transcript_id=HG04160_ch_T0000224;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000224;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000224;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6461029	6463825	100	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_G0000073;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG04160_ch_T0000225;Name=TSPY1
HG04160_chrY	CAT	exon	6461029	6461239	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6461240	6461933	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6461934	6462026	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461964	6462026	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000225:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6461964	6461966	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000225;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462027	6462121	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462122	6462267	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462122	6462267	.	-	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000225:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462268	6462368	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462369	6462480	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462369	6462480	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000225:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462481	6462608	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462609	6462686	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462609	6462686	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000225:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462687	6463293	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463294	6463825	.	-	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000225:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6463294	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000225:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6463777	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_220.1;transcript_id=HG04160_ch_T0000225;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000225;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000225;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6461029	6463825	100	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_G0000073;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG04160_ch_T0000226;Name=TSPY1
HG04160_chrY	CAT	exon	6461029	6461239	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6461240	6461933	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6461934	6462015	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461964	6462015	.	-	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000226:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6461964	6461966	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000226;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462016	6462121	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462122	6462260	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462122	6462260	.	-	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000226:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462261	6462368	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462369	6462480	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462369	6462480	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000226:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462481	6462608	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462609	6462686	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462609	6462686	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000226:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462687	6463293	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463294	6463825	.	-	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000226:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6463294	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000226:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6463777	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_220.4;transcript_id=HG04160_ch_T0000226;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000226;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000226;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6461029	6463825	1000	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_G0000073;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG04160_ch_T0000227;Name=TSPY1
HG04160_chrY	CAT	exon	6461029	6461239	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6461240	6461933	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000227:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6461934	6462026	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462027	6462121	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000227:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462122	6462260	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462261	6462368	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000227:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462369	6462480	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462481	6462608	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000227:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462609	6462686	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462687	6463293	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000227:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463294	6463825	.	-	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_220.5;transcript_id=HG04160_ch_T0000227;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000227;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000227:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6461029	6463825	100	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_G0000073;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG04160_ch_T0000228;Name=TSPY1
HG04160_chrY	CAT	exon	6461029	6461239	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461217	6461239	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6461217	6461219	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000228;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6461240	6461933	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6461934	6462015	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6461934	6462015	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462016	6462121	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462122	6462267	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462122	6462267	.	-	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462268	6462368	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462369	6462480	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462369	6462480	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462481	6462608	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6462609	6462686	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6462609	6462686	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6462687	6463293	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463294	6463431	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6463294	6463431	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6463432	6463692	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000228:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6463693	6463825	.	-	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000228:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6463693	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000228:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6463777	6463779	.	-	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2;transcript_id=HG04160_ch_T0000228;gene_id=HG04160_ch_G0000073;Parent=HG04160_ch_T0000228;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000228;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6466350	6472034	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_219.1;gene_id=HG04160_ch_G0000074;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000074;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6466350	6472034	1000	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_G0000074;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000229;Name=FAM197Y2
HG04160_chrY	CAT	exon	6466350	6466540	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000229:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6466541	6466626	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000229:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6466627	6466772	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000229:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6466773	6468268	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000229:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6468269	6468427	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000229:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6468428	6471974	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000229:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6471975	6472034	.	+	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1;transcript_id=HG04160_ch_T0000229;gene_id=HG04160_ch_G0000074;Parent=HG04160_ch_T0000229;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000229:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6481338	6484135	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;gene_id=HG04160_ch_G0000075;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG04160_ch_G0000075;Name=TSPY10
HG04160_chrY	CAT	transcript	6481338	6484135	100	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_G0000075;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG04160_ch_T0000230;Name=TSPY10
HG04160_chrY	CAT	exon	6481338	6481549	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6481527	6481549	.	-	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6481527	6481529	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6481550	6482243	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000230:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482244	6482325	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482244	6482325	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482326	6482431	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000230:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482432	6482577	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482432	6482577	.	-	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482578	6482678	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000230:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482679	6482790	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482679	6482790	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482791	6482918	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000230:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482919	6482996	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482919	6482996	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482997	6483603	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000230:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6483604	6484135	.	-	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6483604	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000230:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6484087	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_218.1;transcript_id=HG04160_ch_T0000230;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000230;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000230;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6481338	6484135	100	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_G0000075;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG04160_ch_T0000231;Name=TSPY10
HG04160_chrY	CAT	exon	6481338	6481549	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6481550	6482243	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482244	6482336	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482274	6482336	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000231:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6482274	6482276	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482337	6482431	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482432	6482577	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482432	6482577	.	-	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000231:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482578	6482678	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482679	6482790	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482679	6482790	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000231:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482791	6482918	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482919	6482996	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482919	6482996	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000231:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482997	6483603	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6483604	6484135	.	-	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000231:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6483604	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000231:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6484087	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_218.2;transcript_id=HG04160_ch_T0000231;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000231;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000231;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6481338	6484135	100	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_G0000075;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG04160_ch_T0000232;Name=TSPY10
HG04160_chrY	CAT	exon	6481338	6481549	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6481550	6482243	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482244	6482325	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482274	6482325	.	-	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000232:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6482274	6482276	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482326	6482431	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482432	6482570	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482432	6482570	.	-	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000232:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482571	6482678	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482679	6482790	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482679	6482790	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000232:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482791	6482918	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482919	6482996	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6482919	6482996	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000232:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482997	6483603	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6483604	6484135	.	-	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000232:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6483604	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000232:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6484087	6484089	.	-	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_218.3;transcript_id=HG04160_ch_T0000232;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000232;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000232;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6481338	6484135	1000	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_G0000075;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG04160_ch_T0000233;Name=TSPY10
HG04160_chrY	CAT	exon	6481338	6481549	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6481550	6482243	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000233:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482244	6482336	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482337	6482431	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000233:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482432	6482570	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482571	6482678	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000233:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482679	6482790	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482791	6482918	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000233:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6482919	6482996	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6482997	6483603	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000233:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6483604	6484135	.	-	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_218.4;transcript_id=HG04160_ch_T0000233;gene_id=HG04160_ch_G0000075;Parent=HG04160_ch_T0000233;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000233:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6501626	6504440	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;gene_id=HG04160_ch_G0000076;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=augTM,transMap;ID=HG04160_ch_G0000076;Name=TSPY4
HG04160_chrY	CAT	transcript	6501626	6504440	9970	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_G0000076;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG04160_ch_T0000234;Name=TSPY4
HG04160_chrY	CAT	exon	6501626	6501836	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6501837	6502530	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502531	6502612	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6502561	6502612	.	-	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000234:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6502561	6502563	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6502613	6502718	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502719	6502857	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6502719	6502857	.	-	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000234:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6502858	6502965	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502966	6503077	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6502966	6503077	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000234:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6503078	6503205	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6503206	6503283	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6503206	6503283	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000234:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6503284	6503890	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6503891	6504440	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000234:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6503891	6504394	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000234:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6504392	6504394	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=299.661;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000234;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000234;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000234;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6501626	6504440	1000	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_G0000076;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG04160_ch_T0000235;Name=TSPY4
HG04160_chrY	CAT	exon	6501626	6501836	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6501837	6502530	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000235:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502531	6502623	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6502624	6502718	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000235:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502719	6502857	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6502858	6502965	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000235:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6502966	6503077	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6503078	6503205	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000235:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6503206	6503283	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6503284	6503890	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000235:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6503891	6504440	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=299.746;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000235;gene_id=HG04160_ch_G0000076;Parent=HG04160_ch_T0000235;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000235:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6506964	6512661	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;gene_id=HG04160_ch_G0000077;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000077;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6506964	6512661	1000	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_G0000077;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000236;Name=FAM197Y2
HG04160_chrY	CAT	exon	6506964	6507154	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000236:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6507155	6507240	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000236:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6507241	6507386	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000236:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6507387	6508888	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000236:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6508889	6509047	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000236:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6509048	6512601	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000236:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6512602	6512661	.	+	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1,hg002_chrY_paternal_209.1;transcript_id=HG04160_ch_T0000236;gene_id=HG04160_ch_G0000077;Parent=HG04160_ch_T0000236;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000236:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6521948	6524762	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;gene_id=HG04160_ch_G0000078;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG04160_ch_G0000078;Name=TSPY4
HG04160_chrY	CAT	transcript	6521948	6524762	100	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_G0000078;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG04160_ch_T0000237;Name=TSPY4
HG04160_chrY	CAT	exon	6521948	6522158	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6522136	6522158	.	-	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6522136	6522138	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000237;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522159	6522852	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000237:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6522853	6522934	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6522853	6522934	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522935	6523040	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000237:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523041	6523186	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523041	6523186	.	-	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523187	6523287	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000237:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523288	6523399	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523288	6523399	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523400	6523527	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000237:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523528	6523605	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523528	6523605	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523606	6524212	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000237:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6524213	6524762	.	-	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000237:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6524213	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000237:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6524714	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_208.1;transcript_id=HG04160_ch_T0000237;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000237;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000237;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6521948	6524762	100	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_G0000078;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG04160_ch_T0000238;Name=TSPY4
HG04160_chrY	CAT	exon	6521948	6522158	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522159	6522852	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000238:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6522853	6522945	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6522883	6522945	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000238:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6522883	6522885	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000238;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522946	6523040	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000238:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523041	6523186	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523041	6523186	.	-	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000238:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523187	6523287	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000238:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523288	6523399	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523288	6523399	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000238:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523400	6523527	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000238:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523528	6523605	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523528	6523605	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000238:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523606	6524212	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000238:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6524213	6524762	.	-	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000238:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6524213	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000238:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6524714	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_208.2;transcript_id=HG04160_ch_T0000238;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000238;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000238;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6521948	6524762	100	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_G0000078;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG04160_ch_T0000239;Name=TSPY4
HG04160_chrY	CAT	exon	6521948	6522158	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522159	6522852	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000239:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6522853	6522934	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6522883	6522934	.	-	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000239:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6522883	6522885	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000239;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522935	6523040	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000239:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523041	6523179	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523041	6523179	.	-	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000239:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523180	6523287	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000239:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523288	6523399	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523288	6523399	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000239:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523400	6523527	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000239:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523528	6523605	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6523528	6523605	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000239:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523606	6524212	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000239:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6524213	6524762	.	-	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000239:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6524213	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000239:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6524714	6524716	.	-	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_208.3;transcript_id=HG04160_ch_T0000239;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000239;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000239;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6521948	6524762	1000	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_G0000078;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG04160_ch_T0000240;Name=TSPY4
HG04160_chrY	CAT	exon	6521948	6522158	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522159	6522852	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000240:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6522853	6522945	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6522946	6523040	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000240:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523041	6523179	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523180	6523287	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000240:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523288	6523399	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523400	6523527	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000240:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6523528	6523605	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6523606	6524212	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000240:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6524213	6524762	.	-	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000240;gene_id=HG04160_ch_G0000078;Parent=HG04160_ch_T0000240;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000240:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6547576	6553256	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_215;gene_id=HG04160_ch_G0000079;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000079;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6547576	6553256	1000	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_G0000079;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000241;Name=FAM197Y2
HG04160_chrY	CAT	exon	6547576	6547766	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000241:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6547767	6547852	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000241:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6547853	6547998	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000241:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6547999	6549498	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000241:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6549499	6549657	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000241:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6549658	6553196	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000241:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6553197	6553256	.	+	.	source_transcript=hg002_chrY_paternal_215.1;source_transcript_name=hg002_chrY_paternal_215.1;source_gene=hg002_chrY_paternal_215;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_215;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_215.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG04160_ch_T0000241;gene_id=HG04160_ch_G0000079;Parent=HG04160_ch_T0000241;transcript_name=hg002_chrY_paternal_215.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000241:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6562520	6565316	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;gene_id=HG04160_ch_G0000080;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG04160_ch_G0000080;Name=TSPY1
HG04160_chrY	CAT	transcript	6562520	6565316	100	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_G0000080;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG04160_ch_T0000242;Name=TSPY1
HG04160_chrY	CAT	exon	6562520	6562730	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6562708	6562730	.	-	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6562708	6562710	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6562731	6563424	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000242:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563425	6563506	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563425	6563506	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563507	6563612	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000242:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563613	6563758	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563613	6563758	.	-	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563759	6563859	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000242:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563860	6563971	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563860	6563971	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563972	6564099	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000242:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564100	6564177	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564100	6564177	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564178	6564784	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000242:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564785	6565316	.	-	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000242:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564785	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000242:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6565268	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG04160_ch_T0000242;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000242;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000242;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6562520	6565316	100	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_G0000080;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG04160_ch_T0000243;Name=TSPY1
HG04160_chrY	CAT	exon	6562520	6562730	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6562731	6563424	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563425	6563517	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563455	6563517	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000243:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6563455	6563457	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000243;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563518	6563612	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563613	6563758	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563613	6563758	.	-	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000243:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563759	6563859	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563860	6563971	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563860	6563971	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000243:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563972	6564099	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564100	6564177	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564100	6564177	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000243:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564178	6564784	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564785	6565316	.	-	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000243:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564785	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000243:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6565268	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG04160_ch_T0000243;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000243;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000243;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6562520	6565316	100	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_G0000080;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG04160_ch_T0000244;Name=TSPY1
HG04160_chrY	CAT	exon	6562520	6562730	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6562731	6563424	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563425	6563506	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563455	6563506	.	-	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000244:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6563455	6563457	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000244;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563507	6563612	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563613	6563751	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563613	6563751	.	-	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000244:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563752	6563859	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563860	6563971	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563860	6563971	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000244:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563972	6564099	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564100	6564177	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564100	6564177	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000244:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564178	6564784	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564785	6565316	.	-	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000244:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564785	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000244:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6565268	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG04160_ch_T0000244;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000244;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000244;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6562520	6565316	1000	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_G0000080;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG04160_ch_T0000245;Name=TSPY1
HG04160_chrY	CAT	exon	6562520	6562730	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6562731	6563424	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000245:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563425	6563517	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563518	6563612	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000245:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563613	6563751	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563752	6563859	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000245:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563860	6563971	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563972	6564099	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000245:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564100	6564177	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564178	6564784	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000245:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564785	6565316	.	-	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG04160_ch_T0000245;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000245;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000245:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6562520	6565316	100	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_G0000080;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG04160_ch_T0000246;Name=TSPY1
HG04160_chrY	CAT	exon	6562520	6562730	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6562708	6562730	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6562708	6562710	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000246;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6562731	6563424	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563425	6563506	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563425	6563506	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563507	6563612	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563613	6563758	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563613	6563758	.	-	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563759	6563859	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6563860	6563971	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6563860	6563971	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6563972	6564099	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564100	6564177	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564100	6564177	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564178	6564784	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6564785	6564922	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6564785	6564922	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6564923	6565183	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000246:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6565184	6565316	.	-	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000246:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6565184	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000246:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6565268	6565270	.	-	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG04160_ch_T0000246;gene_id=HG04160_ch_G0000080;Parent=HG04160_ch_T0000246;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000246;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6567929	6573520	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;gene_id=HG04160_ch_G0000081;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff,transMap;ID=HG04160_ch_G0000081;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6567929	6573520	1000	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_G0000081;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000247;Name=FAM197Y3
HG04160_chrY	CAT	exon	6567929	6568030	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000247:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6568031	6568116	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000247:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6568117	6568262	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000247:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6568263	6569762	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000247:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6569763	6569921	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000247:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6569922	6573460	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000247:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6573461	6573520	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000247;gene_id=HG04160_ch_G0000081;Parent=HG04160_ch_T0000247;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000247:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6582817	6585631	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_174;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;gene_id=HG04160_ch_G0000082;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000082;Name=TSPY4
HG04160_chrY	CAT	transcript	6582817	6585631	100	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_G0000082;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG04160_ch_T0000248;Name=TSPY4
HG04160_chrY	CAT	exon	6582817	6583027	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583005	6583027	.	-	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6583005	6583007	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000248;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583028	6583721	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000248:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583722	6583803	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583722	6583803	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583804	6583909	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000248:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583910	6584055	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583910	6584055	.	-	2	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584056	6584156	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000248:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584157	6584268	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584157	6584268	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584269	6584396	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000248:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584397	6584474	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584397	6584474	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584475	6585081	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000248:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6585082	6585631	.	-	.	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000248:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6585082	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000248:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6585583	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.1;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.1,hg002_chrY_paternal_194.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000248;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000248;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000248;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6582817	6585631	100	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_G0000082;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG04160_ch_T0000249;Name=TSPY4
HG04160_chrY	CAT	exon	6582817	6583027	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583028	6583721	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000249:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583722	6583814	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583752	6583814	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000249:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6583752	6583754	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000249;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583815	6583909	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000249:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583910	6584055	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583910	6584055	.	-	2	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000249:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584056	6584156	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000249:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584157	6584268	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584157	6584268	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000249:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584269	6584396	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000249:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584397	6584474	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584397	6584474	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000249:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584475	6585081	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000249:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6585082	6585631	.	-	.	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000249:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6585082	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000249:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6585583	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.2;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.2,hg002_chrY_paternal_194.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000249;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000249;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000249;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6582817	6585631	100	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_G0000082;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=HG04160_ch_T0000250;Name=TSPY4
HG04160_chrY	CAT	exon	6582817	6583027	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583028	6583721	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000250:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583722	6583803	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583752	6583803	.	-	1	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000250:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6583752	6583754	.	-	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000250;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583804	6583909	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000250:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583910	6584048	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6583910	6584048	.	-	2	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000250:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584049	6584156	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000250:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584157	6584268	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584157	6584268	.	-	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000250:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584269	6584396	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000250:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584397	6584474	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6584397	6584474	.	-	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000250:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584475	6585081	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000250:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6585082	6585631	.	-	.	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000250:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6585082	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000250:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6585583	6585585	.	-	0	source_transcript=hg002_chrY_paternal_174.3;source_transcript_name=hg002_chrY_paternal_174.4;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_174.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.3,hg002_chrY_paternal_194.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000250;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000250;transcript_name=hg002_chrY_paternal_174.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000250;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6582817	6585631	1000	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_G0000082;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=HG04160_ch_T0000251;Name=TSPY4
HG04160_chrY	CAT	exon	6582817	6583027	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583028	6583721	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000251:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583722	6583814	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6583815	6583909	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000251:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6583910	6584048	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584049	6584156	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000251:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584157	6584268	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584269	6584396	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000251:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6584397	6584474	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6584475	6585081	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000251:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6585082	6585631	.	-	.	source_transcript=hg002_chrY_paternal_174.4;source_transcript_name=hg002_chrY_paternal_174.1;source_gene=hg002_chrY_paternal_174;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_174;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_174.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_174.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000251;gene_id=HG04160_ch_G0000082;Parent=HG04160_ch_T0000251;transcript_name=hg002_chrY_paternal_174.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000251:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6590080	6593847	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_185;gene_id=HG04160_ch_G0000083;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff,transMap_pairwise;ID=HG04160_ch_G0000083;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6590080	6593847	1000	+	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000252;gene_id=HG04160_ch_G0000083;Parent=HG04160_ch_G0000083;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000252;Name=FAM197Y2
HG04160_chrY	CAT	exon	6590080	6590238	.	+	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000252;gene_id=HG04160_ch_G0000083;Parent=HG04160_ch_T0000252;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000252:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6590239	6593787	.	+	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000252;gene_id=HG04160_ch_G0000083;Parent=HG04160_ch_T0000252;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000252:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6593788	6593847	.	+	.	source_transcript=hg002_chrY_paternal_185.1;source_transcript_name=hg002_chrY_paternal_185.1;source_gene=hg002_chrY_paternal_185;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_185;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_185.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000252;gene_id=HG04160_ch_G0000083;Parent=HG04160_ch_T0000252;transcript_name=hg002_chrY_paternal_185.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000252:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6603123	6605937	.	-	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;gene_id=HG04160_ch_G0000084;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG04160_ch_G0000084;Name=TSPY4
HG04160_chrY	CAT	transcript	6603123	6605937	100	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_G0000084;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG04160_ch_T0000253;Name=TSPY4
HG04160_chrY	CAT	exon	6603123	6603333	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6603311	6603333	.	-	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6603311	6603313	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000253;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6603334	6604027	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000253:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604028	6604109	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604028	6604109	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604110	6604215	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000253:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604216	6604361	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604216	6604361	.	-	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604362	6604462	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000253:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604463	6604574	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604463	6604574	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604575	6604702	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000253:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604703	6604780	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604703	6604780	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604781	6605387	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000253:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6605388	6605937	.	-	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000253:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6605388	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000253:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6605889	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG04160_ch_T0000253;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000253;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000253;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6603123	6605937	100	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_G0000084;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG04160_ch_T0000254;Name=TSPY4
HG04160_chrY	CAT	exon	6603123	6603333	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6603334	6604027	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000254:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604028	6604120	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604058	6604120	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000254:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6604058	6604060	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000254;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604121	6604215	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000254:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604216	6604361	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604216	6604361	.	-	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000254:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604362	6604462	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000254:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604463	6604574	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604463	6604574	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000254:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604575	6604702	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000254:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604703	6604780	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604703	6604780	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000254:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604781	6605387	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000254:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6605388	6605937	.	-	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000254:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6605388	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000254:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6605889	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG04160_ch_T0000254;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000254;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000254;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6603123	6605937	100	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_G0000084;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG04160_ch_T0000255;Name=TSPY4
HG04160_chrY	CAT	exon	6603123	6603333	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6603334	6604027	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000255:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604028	6604109	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604058	6604109	.	-	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000255:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6604058	6604060	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG04160_ch_T0000255;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604110	6604215	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000255:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604216	6604354	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604216	6604354	.	-	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000255:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604355	6604462	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000255:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604463	6604574	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604463	6604574	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000255:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604575	6604702	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000255:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604703	6604780	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6604703	6604780	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000255:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604781	6605387	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG04160_ch_T0000255:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6605388	6605937	.	-	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG04160_ch_T0000255:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6605388	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG04160_ch_T0000255:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6605889	6605891	.	-	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG04160_ch_T0000255;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000255;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG04160_ch_T0000255;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6603123	6605937	1000	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_G0000084;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG04160_ch_T0000256;Name=TSPY4
HG04160_chrY	CAT	exon	6603123	6603333	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6603334	6604027	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000256:0;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604028	6604120	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604121	6604215	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000256:1;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604216	6604354	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604355	6604462	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000256:2;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604463	6604574	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604575	6604702	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000256:3;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6604703	6604780	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6604781	6605387	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG04160_ch_T0000256:4;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6605388	6605937	.	-	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG04160_ch_T0000256;gene_id=HG04160_ch_G0000084;Parent=HG04160_ch_T0000256;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG04160_ch_T0000256:5;Name=TSPY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6608461	6614143	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;gene_id=HG04160_ch_G0000085;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000085;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6608461	6614143	1000	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_G0000085;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000257;Name=FAM197Y2
HG04160_chrY	CAT	exon	6608461	6608651	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000257:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6608652	6608737	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000257:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6608738	6608883	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000257:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6608884	6610375	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000257:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6610376	6610534	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000257:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6610535	6614083	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000257:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6614084	6614143	.	+	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG04160_ch_T0000257;gene_id=HG04160_ch_G0000085;Parent=HG04160_ch_T0000257;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000257:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6623404	6626200	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;gene_id=HG04160_ch_G0000086;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG04160_ch_G0000086;Name=TSPY10
HG04160_chrY	CAT	transcript	6623404	6626200	10000	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_G0000086;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG04160_ch_T0000258;Name=TSPY10
HG04160_chrY	CAT	exon	6623404	6623614	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6623592	6623614	.	-	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6623592	6623594	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6623615	6624308	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624309	6624390	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624309	6624390	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624391	6624496	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624497	6624642	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624497	6624642	.	-	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624643	6624743	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624744	6624855	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624744	6624855	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624856	6624983	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624984	6625061	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624984	6625061	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6625062	6625668	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6625669	6626200	.	-	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6625669	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6626152	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG04160_ch_T0000258;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000258;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6623404	6626200	10000	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_G0000086;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG04160_ch_T0000259;Name=TSPY10
HG04160_chrY	CAT	exon	6623404	6623614	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6623615	6624308	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624309	6624401	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624339	6624401	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6624339	6624341	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624402	6624496	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624497	6624642	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624497	6624642	.	-	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624643	6624743	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624744	6624855	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624744	6624855	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624856	6624983	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624984	6625061	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624984	6625061	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6625062	6625668	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6625669	6626200	.	-	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6625669	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6626152	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG04160_ch_T0000259;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000259;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6623404	6626200	10000	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_G0000086;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG04160_ch_T0000260;Name=TSPY10
HG04160_chrY	CAT	exon	6623404	6623614	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6623615	6624308	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624309	6624390	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624339	6624390	.	-	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6624339	6624341	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624391	6624496	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624497	6624635	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624497	6624635	.	-	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624636	6624743	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624744	6624855	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624744	6624855	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624856	6624983	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624984	6625061	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6624984	6625061	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6625062	6625668	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6625669	6626200	.	-	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6625669	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6626152	6626154	.	-	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG04160_ch_T0000260;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000260;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6623404	6626200	1000	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_G0000086;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG04160_ch_T0000261;Name=TSPY10
HG04160_chrY	CAT	exon	6623404	6623614	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6623615	6624308	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624309	6624401	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624402	6624496	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624497	6624635	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624636	6624743	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624744	6624855	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6624856	6624983	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6624984	6625061	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6625062	6625668	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6625669	6626200	.	-	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG04160_ch_T0000261;gene_id=HG04160_ch_G0000086;Parent=HG04160_ch_T0000261;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6628724	6634417	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_191;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;gene_id=HG04160_ch_G0000087;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000087;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6628724	6634417	1000	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_G0000087;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000262;Name=FAM197Y2
HG04160_chrY	CAT	exon	6628724	6628914	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6628915	6629000	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6629001	6629146	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6629147	6630648	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6630649	6630807	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6630808	6634357	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6634358	6634417	.	+	.	source_transcript=hg002_chrY_paternal_191.1;source_transcript_name=hg002_chrY_paternal_191.1;source_gene=hg002_chrY_paternal_191;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_191;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_191.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG04160_ch_T0000262;gene_id=HG04160_ch_G0000087;Parent=HG04160_ch_T0000262;transcript_name=hg002_chrY_paternal_191.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000262:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6643693	6646489	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;gene_id=HG04160_ch_G0000088;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG04160_ch_G0000088;Name=TSPY10
HG04160_chrY	CAT	transcript	6643693	6646489	10000	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_G0000088;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG04160_ch_T0000263;Name=TSPY10
HG04160_chrY	CAT	exon	6643693	6643903	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6643881	6643903	.	-	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6643881	6643883	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6643904	6644597	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644598	6644679	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644598	6644679	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644680	6644785	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644786	6644931	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644786	6644931	.	-	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644932	6645032	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645033	6645144	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645033	6645144	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645145	6645272	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645273	6645350	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645273	6645350	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645351	6645957	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645958	6646489	.	-	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645958	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6646441	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG04160_ch_T0000263;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000263;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6643693	6646489	10000	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_G0000088;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG04160_ch_T0000264;Name=TSPY10
HG04160_chrY	CAT	exon	6643693	6643903	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6643904	6644597	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644598	6644690	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644628	6644690	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6644628	6644630	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644691	6644785	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644786	6644931	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644786	6644931	.	-	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644932	6645032	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645033	6645144	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645033	6645144	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645145	6645272	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645273	6645350	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645273	6645350	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645351	6645957	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645958	6646489	.	-	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645958	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6646441	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG04160_ch_T0000264;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000264;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6643693	6646489	10000	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_G0000088;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG04160_ch_T0000265;Name=TSPY10
HG04160_chrY	CAT	exon	6643693	6643903	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6643904	6644597	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644598	6644679	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644628	6644679	.	-	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6644628	6644630	.	-	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644680	6644785	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644786	6644924	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6644786	6644924	.	-	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644925	6645032	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645033	6645144	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645033	6645144	.	-	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645145	6645272	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645273	6645350	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645273	6645350	.	-	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645351	6645957	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645958	6646489	.	-	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6645958	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6646441	6646443	.	-	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG04160_ch_T0000265;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000265;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6643693	6646489	1000	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_G0000088;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=HG04160_ch_T0000266;Name=TSPY10
HG04160_chrY	CAT	exon	6643693	6643903	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6643904	6644597	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644598	6644690	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644691	6644785	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6644786	6644924	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6644925	6645032	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645033	6645144	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645145	6645272	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645273	6645350	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6645351	6645957	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6645958	6646489	.	-	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG04160_ch_T0000266;gene_id=HG04160_ch_G0000088;Parent=HG04160_ch_T0000266;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6649097	6654699	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;gene_id=HG04160_ch_G0000089;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000089;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6649097	6654699	1000	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_G0000089;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000267;Name=FAM197Y3
HG04160_chrY	CAT	exon	6649097	6649198	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000267:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6649199	6649284	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000267:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6649285	6649430	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000267:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6649431	6650932	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000267:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6650933	6651091	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000267:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6651092	6654639	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000267:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6654640	6654699	.	+	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG04160_ch_T0000267;gene_id=HG04160_ch_G0000089;Parent=HG04160_ch_T0000267;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000267:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6663971	6666767	.	-	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;gene_id=HG04160_ch_G0000090;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG04160_ch_G0000090;Name=TSPY10
HG04160_chrY	CAT	transcript	6663971	6666767	100	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_G0000090;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG04160_ch_T0000268;Name=TSPY10
HG04160_chrY	CAT	exon	6663971	6664181	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6664159	6664181	.	-	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6664159	6664161	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664182	6664875	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000268:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6664876	6664957	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6664876	6664957	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664958	6665063	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000268:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665064	6665209	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665064	6665209	.	-	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665210	6665310	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000268:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665311	6665422	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665311	6665422	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665423	6665550	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000268:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665551	6665628	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665551	6665628	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665629	6666235	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000268:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6666236	6666767	.	-	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000268:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6666236	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000268:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6666719	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG04160_ch_T0000268;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000268;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000268;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6663971	6666767	100	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_G0000090;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG04160_ch_T0000269;Name=TSPY10
HG04160_chrY	CAT	exon	6663971	6664181	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664182	6664875	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6664876	6664968	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6664906	6664968	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000269:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6664906	6664908	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664969	6665063	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665064	6665209	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665064	6665209	.	-	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000269:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665210	6665310	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665311	6665422	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665311	6665422	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000269:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665423	6665550	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665551	6665628	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665551	6665628	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000269:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665629	6666235	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6666236	6666767	.	-	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000269:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6666236	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000269:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6666719	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG04160_ch_T0000269;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000269;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000269;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6663971	6666767	100	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_G0000090;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG04160_ch_T0000270;Name=TSPY10
HG04160_chrY	CAT	exon	6663971	6664181	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664182	6664875	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6664876	6664957	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6664906	6664957	.	-	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000270:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6664906	6664908	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG04160_ch_T0000270;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664958	6665063	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665064	6665202	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665064	6665202	.	-	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000270:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665203	6665310	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665311	6665422	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665311	6665422	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000270:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665423	6665550	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665551	6665628	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6665551	6665628	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000270:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665629	6666235	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG04160_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6666236	6666767	.	-	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG04160_ch_T0000270:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6666236	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG04160_ch_T0000270:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6666719	6666721	.	-	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG04160_ch_T0000270;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000270;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG04160_ch_T0000270;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6663971	6666767	1000	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_G0000090;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=HG04160_ch_T0000271;Name=TSPY10
HG04160_chrY	CAT	exon	6663971	6664181	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664182	6664875	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000271:0;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6664876	6664968	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6664969	6665063	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000271:1;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665064	6665202	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665203	6665310	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000271:2;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665311	6665422	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665423	6665550	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000271:3;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6665551	6665628	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6665629	6666235	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG04160_ch_T0000271:4;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6666236	6666767	.	-	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG04160_ch_T0000271;gene_id=HG04160_ch_G0000090;Parent=HG04160_ch_T0000271;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG04160_ch_T0000271:5;Name=TSPY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6669380	6674985	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;gene_id=HG04160_ch_G0000091;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000091;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6669380	6674985	1000	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_G0000091;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000272;Name=FAM197Y3
HG04160_chrY	CAT	exon	6669380	6669481	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000272:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6669482	6669567	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000272:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6669568	6669713	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000272:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6669714	6671215	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000272:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6671216	6671374	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000272:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6671375	6674925	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000272:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6674926	6674985	.	+	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG04160_ch_T0000272;gene_id=HG04160_ch_G0000091;Parent=HG04160_ch_T0000272;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000272:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6684286	6687082	.	-	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_188;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;gene_id=HG04160_ch_G0000092;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG04160_ch_G0000092;Name=TSPY3
HG04160_chrY	CAT	transcript	6684286	6687082	9990	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_G0000092;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG04160_ch_T0000273;Name=TSPY3
HG04160_chrY	CAT	exon	6684286	6684496	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6684474	6684496	.	-	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6684474	6684476	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000273;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6684497	6685190	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000273:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685191	6685272	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685191	6685272	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685273	6685378	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000273:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685379	6685524	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685379	6685524	.	-	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685525	6685625	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000273:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685626	6685737	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685626	6685737	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685738	6685865	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000273:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685866	6685943	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685866	6685943	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685944	6686550	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000273:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6686551	6687082	.	-	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000273:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6686551	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000273:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6687034	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_176.1;transcript_id=HG04160_ch_T0000273;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000273;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000273;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6684286	6687082	9990	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_G0000092;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG04160_ch_T0000274;Name=TSPY3
HG04160_chrY	CAT	exon	6684286	6684496	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6684497	6685190	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000274:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685191	6685283	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685221	6685283	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000274:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6685221	6685223	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000274;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685284	6685378	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000274:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685379	6685524	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685379	6685524	.	-	2	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000274:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685525	6685625	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000274:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685626	6685737	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685626	6685737	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000274:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685738	6685865	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000274:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685866	6685943	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685866	6685943	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000274:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685944	6686550	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000274:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6686551	6687082	.	-	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000274:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6686551	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000274:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6687034	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_176.2;transcript_id=HG04160_ch_T0000274;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000274;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000274;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6684286	6687082	9990	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_G0000092;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG04160_ch_T0000275;Name=TSPY3
HG04160_chrY	CAT	exon	6684286	6684496	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6684497	6685190	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000275:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685191	6685272	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685221	6685272	.	-	1	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000275:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6685221	6685223	.	-	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000275;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685273	6685378	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000275:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685379	6685517	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685379	6685517	.	-	2	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000275:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685518	6685625	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000275:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685626	6685737	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685626	6685737	.	-	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000275:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685738	6685865	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000275:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685866	6685943	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6685866	6685943	.	-	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000275:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685944	6686550	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000275:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6686551	6687082	.	-	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000275:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6686551	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000275:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6687034	6687036	.	-	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_176.3;transcript_id=HG04160_ch_T0000275;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000275;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000275;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6684286	6687082	1000	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_G0000092;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=HG04160_ch_T0000276;Name=TSPY3
HG04160_chrY	CAT	exon	6684286	6684496	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6684497	6685190	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000276:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685191	6685283	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685284	6685378	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000276:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685379	6685517	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685518	6685625	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000276:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685626	6685737	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685738	6685865	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000276:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6685866	6685943	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6685944	6686550	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000276:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6686551	6687082	.	-	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_176.4,hg002_chrY_paternal_164.4;transcript_id=HG04160_ch_T0000276;gene_id=HG04160_ch_G0000092;Parent=HG04160_ch_T0000276;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000276:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6689607	6695292	.	+	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_181;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;gene_id=HG04160_ch_G0000093;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG04160_ch_G0000093;Name=FAM197Y2
HG04160_chrY	CAT	transcript	6689607	6695292	1000	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_G0000093;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=HG04160_ch_T0000277;Name=FAM197Y2
HG04160_chrY	CAT	exon	6689607	6689797	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000277:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6689798	6689883	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000277:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6689884	6690029	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000277:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6690030	6691523	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000277:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6691524	6691682	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000277:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6691683	6695232	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG04160_ch_T0000277:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6695233	6695292	.	+	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_175.1;transcript_id=HG04160_ch_T0000277;gene_id=HG04160_ch_G0000093;Parent=HG04160_ch_T0000277;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG04160_ch_T0000277:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6704597	6707411	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;gene_id=HG04160_ch_G0000094;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG04160_ch_G0000094;Name=TSPY1
HG04160_chrY	CAT	transcript	6704597	6707411	10000	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_G0000094;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG04160_ch_T0000278;Name=TSPY1
HG04160_chrY	CAT	exon	6704597	6704807	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6704785	6704807	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6704785	6704787	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6704808	6705501	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6705502	6705583	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6705502	6705583	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6705584	6705689	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6705690	6705835	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6705690	6705835	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6705836	6705936	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6705937	6706048	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6705937	6706048	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6706049	6706176	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6706177	6706254	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6706177	6706254	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6706255	6706861	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6706862	6706999	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6706862	6706999	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6707000	6707278	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6707279	6707411	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6707279	6707365	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6707363	6707365	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000278;gene_id=HG04160_ch_G0000094;Parent=HG04160_ch_T0000278;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6710024	6715631	.	+	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;gene_id=HG04160_ch_G0000095;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG04160_ch_G0000095;Name=FAM197Y6
HG04160_chrY	CAT	transcript	6710024	6715631	1000	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_G0000095;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG04160_ch_T0000279;Name=FAM197Y6
HG04160_chrY	CAT	exon	6710024	6710125	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG04160_ch_T0000279:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6710126	6710211	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG04160_ch_T0000279:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6710212	6710357	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG04160_ch_T0000279:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6710358	6711863	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG04160_ch_T0000279:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6711864	6712022	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG04160_ch_T0000279:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6712023	6715571	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG04160_ch_T0000279:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6715572	6715631	.	+	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG04160_ch_T0000279;gene_id=HG04160_ch_G0000095;Parent=HG04160_ch_T0000279;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG04160_ch_T0000279:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6724924	6727720	.	-	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;gene_id=HG04160_ch_G0000096;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000096;Name=TSPY1
HG04160_chrY	CAT	transcript	6724924	6727720	100	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_G0000096;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG04160_ch_T0000280;Name=TSPY1
HG04160_chrY	CAT	exon	6724924	6725134	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725112	6725134	.	-	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6725112	6725114	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725135	6725828	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000280:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6725829	6725910	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725829	6725910	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725911	6726016	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000280:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726017	6726162	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726017	6726162	.	-	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726163	6726263	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000280:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726264	6726375	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726264	6726375	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726376	6726503	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000280:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726504	6726581	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726504	6726581	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726582	6727188	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000280:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727189	6727720	.	-	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6727189	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000280:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6727672	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_172.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000280;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000280;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000280;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6724924	6727720	100	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_G0000096;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG04160_ch_T0000281;Name=TSPY1
HG04160_chrY	CAT	exon	6724924	6725134	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725135	6725828	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6725829	6725921	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725859	6725921	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6725859	6725861	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725922	6726016	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726017	6726162	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726017	6726162	.	-	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726163	6726263	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726264	6726375	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726264	6726375	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726376	6726503	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726504	6726581	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726504	6726581	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726582	6727188	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727189	6727720	.	-	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6727189	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6727672	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_172.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000281;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000281;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6724924	6727720	100	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_G0000096;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG04160_ch_T0000282;Name=TSPY1
HG04160_chrY	CAT	exon	6724924	6725134	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725135	6725828	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6725829	6725910	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725859	6725910	.	-	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6725859	6725861	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725911	6726016	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726017	6726155	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726017	6726155	.	-	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726156	6726263	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726264	6726375	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726264	6726375	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726376	6726503	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726504	6726581	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726504	6726581	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726582	6727188	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727189	6727720	.	-	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6727189	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6727672	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_172.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000282;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000282;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6724924	6727720	1000	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_G0000096;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG04160_ch_T0000283;Name=TSPY1
HG04160_chrY	CAT	exon	6724924	6725134	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725135	6725828	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6725829	6725921	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725922	6726016	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726017	6726155	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726156	6726263	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726264	6726375	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726376	6726503	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726504	6726581	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726582	6727188	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG04160_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727189	6727720	.	-	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_172.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000283;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000283;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG04160_ch_T0000283:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6724924	6727720	100	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_G0000096;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG04160_ch_T0000284;Name=TSPY1
HG04160_chrY	CAT	exon	6724924	6725134	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725112	6725134	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6725112	6725114	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG04160_ch_T0000284;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725135	6725828	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6725829	6725910	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6725829	6725910	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6725911	6726016	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726017	6726162	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726017	6726162	.	-	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726163	6726263	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726264	6726375	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726264	6726375	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726376	6726503	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6726504	6726581	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6726504	6726581	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6726582	6727188	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727189	6727326	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6727189	6727326	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6727327	6727587	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG04160_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6727588	6727720	.	-	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG04160_ch_T0000284:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6727588	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG04160_ch_T0000284:6;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6727672	6727674	.	-	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000284;gene_id=HG04160_ch_G0000096;Parent=HG04160_ch_T0000284;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG04160_ch_T0000284;Name=TSPY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6730334	6735923	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;gene_id=HG04160_ch_G0000097;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=transMap,transMap_pairwise;ID=HG04160_ch_G0000097;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6730334	6735923	1000	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_G0000097;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000285;Name=FAM197Y3
HG04160_chrY	CAT	exon	6730334	6730435	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000285:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6730436	6730521	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000285:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6730522	6730667	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000285:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6730668	6732154	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000285:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6732155	6732313	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000285:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6732314	6735863	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000285:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6735864	6735923	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=299.786;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000285;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000285;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000285:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6735864	6735923	1000	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000286;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_G0000097;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000286;Name=FAM197Y3
HG04160_chrY	CAT	exon	6735864	6735923	.	+	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG04160_ch_T0000286;gene_id=HG04160_ch_G0000097;Parent=HG04160_ch_T0000286;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000286:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6745191	6748005	.	-	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_164;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG04160_ch_G0000098;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG04160_ch_G0000098;Name=TSPY3
HG04160_chrY	CAT	transcript	6745191	6748005	100	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_G0000098;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG04160_ch_T0000287;Name=TSPY3
HG04160_chrY	CAT	exon	6745191	6745401	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6745379	6745401	.	-	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6745379	6745381	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000287;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6745402	6746095	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000287:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746096	6746177	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746096	6746177	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746178	6746283	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000287:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746284	6746429	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746284	6746429	.	-	2	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746430	6746530	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000287:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746531	6746642	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746531	6746642	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746643	6746770	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000287:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746771	6746848	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746771	6746848	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746849	6747455	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000287:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6747456	6748005	.	-	.	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000287:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6747456	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000287:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6747957	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.1;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;transcript_id=HG04160_ch_T0000287;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000287;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000287;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6745191	6748005	100	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_G0000098;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG04160_ch_T0000288;Name=TSPY3
HG04160_chrY	CAT	exon	6745191	6745401	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6745402	6746095	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000288:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746096	6746188	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746126	6746188	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000288:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6746126	6746128	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000288;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746189	6746283	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000288:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746284	6746429	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746284	6746429	.	-	2	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000288:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746430	6746530	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000288:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746531	6746642	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746531	6746642	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000288:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746643	6746770	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000288:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746771	6746848	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746771	6746848	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000288:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746849	6747455	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000288:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6747456	6748005	.	-	.	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000288:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6747456	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000288:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6747957	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.2;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;transcript_id=HG04160_ch_T0000288;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000288;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000288;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6745191	6748005	100	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_G0000098;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=HG04160_ch_T0000289;Name=TSPY3
HG04160_chrY	CAT	exon	6745191	6745401	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6745402	6746095	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000289:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746096	6746177	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746126	6746177	.	-	1	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000289:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6746126	6746128	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=stop_codon:HG04160_ch_T0000289;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746178	6746283	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000289:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746284	6746422	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746284	6746422	.	-	2	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000289:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746423	6746530	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000289:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746531	6746642	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746531	6746642	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000289:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746643	6746770	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000289:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746771	6746848	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6746771	6746848	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000289:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746849	6747455	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=intron:HG04160_ch_T0000289:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6747456	6748005	.	-	.	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=exon:HG04160_ch_T0000289:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6747456	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=CDS:HG04160_ch_T0000289:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6747957	6747959	.	-	0	source_transcript=hg002_chrY_paternal_164.3;source_transcript_name=hg002_chrY_paternal_164.4;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_164.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;transcript_id=HG04160_ch_T0000289;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000289;transcript_name=hg002_chrY_paternal_164.4;gene_name=TSPY3;ID=start_codon:HG04160_ch_T0000289;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6745191	6748005	1000	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_G0000098;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=HG04160_ch_T0000290;Name=TSPY3
HG04160_chrY	CAT	exon	6745191	6745401	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6745402	6746095	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000290:0;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746096	6746188	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746189	6746283	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000290:1;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746284	6746422	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746423	6746530	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000290:2;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746531	6746642	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746643	6746770	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000290:3;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6746771	6746848	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6746849	6747455	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=intron:HG04160_ch_T0000290:4;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6747456	6748005	.	-	.	source_transcript=hg002_chrY_paternal_164.4;source_transcript_name=hg002_chrY_paternal_164.1;source_gene=hg002_chrY_paternal_164;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_164;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_164.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_164.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;transcript_id=HG04160_ch_T0000290;gene_id=HG04160_ch_G0000098;Parent=HG04160_ch_T0000290;transcript_name=hg002_chrY_paternal_164.1;gene_name=TSPY3;ID=exon:HG04160_ch_T0000290:5;Name=TSPY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6750620	6756232	.	+	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_153;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG04160_ch_G0000099;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG04160_ch_G0000099;Name=FAM197Y3
HG04160_chrY	CAT	transcript	6750620	6756232	1000	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_G0000099;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=HG04160_ch_T0000291;Name=FAM197Y3
HG04160_chrY	CAT	exon	6750620	6750721	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000291:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6750722	6750807	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000291:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6750808	6750953	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000291:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6750954	6752463	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000291:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6752464	6752622	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000291:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6752623	6756172	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=intron:HG04160_ch_T0000291:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6756173	6756232	.	+	.	source_transcript=hg002_chrY_paternal_153.1;source_transcript_name=hg002_chrY_paternal_153.1;source_gene=hg002_chrY_paternal_153;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_153;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_153.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_153.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG04160_ch_T0000291;gene_id=HG04160_ch_G0000099;Parent=HG04160_ch_T0000291;transcript_name=hg002_chrY_paternal_153.1;gene_name=FAM197Y3;ID=exon:HG04160_ch_T0000291:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6765535	6768331	.	-	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG04160_ch_G0000100;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000100;Name=TSPY8
HG04160_chrY	CAT	transcript	6765535	6768331	100	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_G0000100;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG04160_ch_T0000292;Name=TSPY8
HG04160_chrY	CAT	exon	6765535	6765745	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6765723	6765745	.	-	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6765723	6765725	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG04160_ch_T0000292;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6765746	6766439	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000292:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766440	6766521	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766440	6766521	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766522	6766627	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000292:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766628	6766773	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766628	6766773	.	-	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766774	6766874	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000292:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766875	6766986	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766875	6766986	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766987	6767114	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000292:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767115	6767192	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767115	6767192	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6767193	6767799	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000292:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767800	6768331	.	-	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000292:5;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767800	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000292:5;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6768283	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000292;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000292;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG04160_ch_T0000292;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6765535	6768331	100	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_G0000100;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG04160_ch_T0000293;Name=TSPY8
HG04160_chrY	CAT	exon	6765535	6765745	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6765746	6766439	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000293:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766440	6766532	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766470	6766532	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000293:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6766470	6766472	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG04160_ch_T0000293;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766533	6766627	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000293:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766628	6766773	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766628	6766773	.	-	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000293:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766774	6766874	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000293:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766875	6766986	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766875	6766986	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000293:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766987	6767114	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000293:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767115	6767192	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767115	6767192	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000293:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6767193	6767799	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000293:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767800	6768331	.	-	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000293:5;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767800	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000293:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6768283	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000293;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000293;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG04160_ch_T0000293;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6765535	6768331	100	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_G0000100;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG04160_ch_T0000294;Name=TSPY8
HG04160_chrY	CAT	exon	6765535	6765745	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6765746	6766439	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000294:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766440	6766521	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766470	6766521	.	-	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000294:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	6766470	6766472	.	-	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG04160_ch_T0000294;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766522	6766627	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000294:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766628	6766766	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766628	6766766	.	-	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000294:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766767	6766874	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000294:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766875	6766986	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6766875	6766986	.	-	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000294:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766987	6767114	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000294:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767115	6767192	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767115	6767192	.	-	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000294:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6767193	6767799	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG04160_ch_T0000294:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767800	6768331	.	-	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG04160_ch_T0000294:5;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	6767800	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG04160_ch_T0000294:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	6768283	6768285	.	-	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000294;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000294;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG04160_ch_T0000294;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	6765535	6768331	1000	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_G0000100;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG04160_ch_T0000295;Name=TSPY8
HG04160_chrY	CAT	exon	6765535	6765745	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6765746	6766439	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG04160_ch_T0000295:0;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766440	6766532	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766533	6766627	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG04160_ch_T0000295:1;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766628	6766766	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766767	6766874	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG04160_ch_T0000295:2;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6766875	6766986	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6766987	6767114	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG04160_ch_T0000295:3;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767115	6767192	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6767193	6767799	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG04160_ch_T0000295:4;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6767800	6768331	.	-	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000295;gene_id=HG04160_ch_G0000100;Parent=HG04160_ch_T0000295;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG04160_ch_T0000295:5;Name=TSPY8;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6770963	6775915	.	+	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=HG04160_ch_G0000101;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG04160_ch_G0000101;Name=TTTY20
HG04160_chrY	CAT	transcript	6770963	6775915	1000	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG04160_ch_T0000296;gene_id=HG04160_ch_G0000101;Parent=HG04160_ch_G0000101;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG04160_ch_T0000296;Name=TTTY20
HG04160_chrY	CAT	exon	6770963	6771044	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG04160_ch_T0000296;gene_id=HG04160_ch_G0000101;Parent=HG04160_ch_T0000296;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG04160_ch_T0000296:0;Name=TTTY20;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6771045	6775738	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG04160_ch_T0000296;gene_id=HG04160_ch_G0000101;Parent=HG04160_ch_T0000296;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG04160_ch_T0000296:0;Name=TTTY20;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6775739	6775915	.	+	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG04160_ch_T0000296;gene_id=HG04160_ch_G0000101;Parent=HG04160_ch_T0000296;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG04160_ch_T0000296:1;Name=TTTY20;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6782921	6788734	.	+	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG04160_ch_G0000102;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG04160_ch_G0000102;Name=RBMY1A3P
HG04160_chrY	CAT	transcript	6782921	6788734	1000	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_G0000102;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG04160_ch_T0000297;Name=RBMY1A3P
HG04160_chrY	CAT	exon	6782921	6783034	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG04160_ch_T0000297:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6783035	6783506	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG04160_ch_T0000297:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6783507	6783610	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG04160_ch_T0000297:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6783611	6786625	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG04160_ch_T0000297:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6786626	6786803	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG04160_ch_T0000297:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6786804	6788703	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG04160_ch_T0000297:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6788704	6788734	.	+	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG04160_ch_T0000297;gene_id=HG04160_ch_G0000102;Parent=HG04160_ch_T0000297;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG04160_ch_T0000297:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6801182	6813410	.	-	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG04160_ch_G0000103;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG04160_ch_G0000103;Name=LOC105379267
HG04160_chrY	CAT	transcript	6801182	6813410	1000	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_G0000103;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG04160_ch_T0000298;Name=LOC105379267
HG04160_chrY	CAT	exon	6801182	6801252	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_T0000298;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG04160_ch_T0000298:0;Name=LOC105379267;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6801253	6811918	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_T0000298;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG04160_ch_T0000298:0;Name=LOC105379267;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6811919	6811993	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_T0000298;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG04160_ch_T0000298:1;Name=LOC105379267;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6811994	6813238	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_T0000298;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG04160_ch_T0000298:1;Name=LOC105379267;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6813239	6813410	.	-	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG04160_ch_T0000298;gene_id=HG04160_ch_G0000103;Parent=HG04160_ch_T0000298;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG04160_ch_T0000298:2;Name=LOC105379267;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6814566	6816817	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG04160_ch_G0000104;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG04160_ch_G0000104;Name=LOC105379266
HG04160_chrY	CAT	transcript	6814566	6816817	1000	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000299;gene_id=HG04160_ch_G0000104;Parent=HG04160_ch_G0000104;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG04160_ch_T0000299;Name=LOC105379266
HG04160_chrY	CAT	exon	6814566	6815847	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000299;gene_id=HG04160_ch_G0000104;Parent=HG04160_ch_T0000299;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG04160_ch_T0000299:0;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6815848	6816532	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000299;gene_id=HG04160_ch_G0000104;Parent=HG04160_ch_T0000299;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG04160_ch_T0000299:0;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6816533	6816817	.	-	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000299;gene_id=HG04160_ch_G0000104;Parent=HG04160_ch_T0000299;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG04160_ch_T0000299:1;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6822851	6831397	.	-	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG04160_ch_G0000105;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG04160_ch_G0000105;Name=LOC105379265
HG04160_chrY	CAT	transcript	6822851	6831397	1000	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_G0000105;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG04160_ch_T0000300;Name=LOC105379265
HG04160_chrY	CAT	exon	6822851	6822979	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG04160_ch_T0000300:0;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6822980	6827360	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG04160_ch_T0000300:0;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6827361	6827447	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG04160_ch_T0000300:1;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6827448	6829591	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG04160_ch_T0000300:1;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6829592	6829733	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG04160_ch_T0000300:2;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6829734	6830841	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG04160_ch_T0000300:2;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6830842	6831397	.	-	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG04160_ch_T0000300;gene_id=HG04160_ch_G0000105;Parent=HG04160_ch_T0000300;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG04160_ch_T0000300:3;Name=LOC105379265;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	6836086	6840950	.	-	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG04160_ch_G0000106;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG04160_ch_G0000106;Name=LOC105379264
HG04160_chrY	CAT	transcript	6836086	6840950	1000	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_G0000106;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG04160_ch_T0000301;Name=LOC105379264
HG04160_chrY	CAT	exon	6836086	6836169	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG04160_ch_T0000301:0;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6836170	6838478	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG04160_ch_T0000301:0;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6838479	6838554	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG04160_ch_T0000301:1;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6838555	6840616	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG04160_ch_T0000301:1;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6840617	6840721	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG04160_ch_T0000301:2;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	6840722	6840875	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG04160_ch_T0000301:2;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	6840876	6840950	.	-	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG04160_ch_T0000301;gene_id=HG04160_ch_G0000106;Parent=HG04160_ch_T0000301;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG04160_ch_T0000301:3;Name=LOC105379264;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7238578	7272644	.	+	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG04160_ch_G0000107;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG04160_ch_G0000107;Name=TTTY11
HG04160_chrY	CAT	transcript	7238578	7272644	1000	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_G0000107;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG04160_ch_T0000302;Name=TTTY11
HG04160_chrY	CAT	exon	7238578	7238614	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG04160_ch_T0000302:0;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7238615	7261014	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG04160_ch_T0000302:0;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7261015	7261098	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG04160_ch_T0000302:1;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7261099	7266654	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG04160_ch_T0000302:1;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7266655	7266957	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG04160_ch_T0000302:2;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7266958	7271753	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG04160_ch_T0000302:2;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7271754	7272069	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG04160_ch_T0000302:3;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7272070	7272550	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG04160_ch_T0000302:3;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7272551	7272644	.	+	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG04160_ch_T0000302;gene_id=HG04160_ch_G0000107;Parent=HG04160_ch_T0000302;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG04160_ch_T0000302:4;Name=TTTY11;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7331653	7334138	.	+	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG04160_ch_G0000108;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG04160_ch_G0000108;Name=LOC105377235
HG04160_chrY	CAT	transcript	7331653	7334138	1000	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_G0000108;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG04160_ch_T0000303;Name=LOC105377235
HG04160_chrY	CAT	exon	7331653	7331840	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG04160_ch_T0000303:0;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7331841	7333308	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG04160_ch_T0000303:0;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7333309	7333571	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG04160_ch_T0000303:1;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7333572	7333661	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG04160_ch_T0000303:1;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7333662	7333757	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG04160_ch_T0000303:2;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7333758	7333854	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG04160_ch_T0000303:2;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7333855	7334138	.	+	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG04160_ch_T0000303;gene_id=HG04160_ch_G0000108;Parent=HG04160_ch_T0000303;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG04160_ch_T0000303:3;Name=LOC105377235;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7350663	7351474	.	-	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG04160_ch_G0000109;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG04160_ch_G0000109;Name=TTTY19
HG04160_chrY	CAT	transcript	7350663	7351474	1000	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG04160_ch_T0000304;gene_id=HG04160_ch_G0000109;Parent=HG04160_ch_G0000109;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG04160_ch_T0000304;Name=TTTY19
HG04160_chrY	CAT	exon	7350663	7350843	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG04160_ch_T0000304;gene_id=HG04160_ch_G0000109;Parent=HG04160_ch_T0000304;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG04160_ch_T0000304:0;Name=TTTY19;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7350844	7351386	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG04160_ch_T0000304;gene_id=HG04160_ch_G0000109;Parent=HG04160_ch_T0000304;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG04160_ch_T0000304:0;Name=TTTY19;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7351387	7351474	.	-	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG04160_ch_T0000304;gene_id=HG04160_ch_G0000109;Parent=HG04160_ch_T0000304;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG04160_ch_T0000304:1;Name=TTTY19;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7360649	7362070	.	+	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG04160_ch_G0000110;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG04160_ch_G0000110;Name=LOC105377234
HG04160_chrY	CAT	transcript	7360649	7362070	1000	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_G0000110;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG04160_ch_T0000305;Name=LOC105377234
HG04160_chrY	CAT	exon	7360649	7360840	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_T0000305;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG04160_ch_T0000305:0;Name=LOC105377234;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7360841	7361421	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_T0000305;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG04160_ch_T0000305:0;Name=LOC105377234;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7361422	7361499	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_T0000305;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG04160_ch_T0000305:1;Name=LOC105377234;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7361500	7361983	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_T0000305;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG04160_ch_T0000305:1;Name=LOC105377234;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7361984	7362070	.	+	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG04160_ch_T0000305;gene_id=HG04160_ch_G0000110;Parent=HG04160_ch_T0000305;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG04160_ch_T0000305:2;Name=LOC105377234;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7372080	7372588	.	+	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG04160_ch_G0000111;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG04160_ch_G0000111;Name=TTTY18
HG04160_chrY	CAT	transcript	7372080	7372588	1000	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG04160_ch_T0000306;gene_id=HG04160_ch_G0000111;Parent=HG04160_ch_G0000111;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG04160_ch_T0000306;Name=TTTY18
HG04160_chrY	CAT	exon	7372080	7372237	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG04160_ch_T0000306;gene_id=HG04160_ch_G0000111;Parent=HG04160_ch_T0000306;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG04160_ch_T0000306:0;Name=TTTY18;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7372238	7372525	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG04160_ch_T0000306;gene_id=HG04160_ch_G0000111;Parent=HG04160_ch_T0000306;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG04160_ch_T0000306:0;Name=TTTY18;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7372526	7372588	.	+	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG04160_ch_T0000306;gene_id=HG04160_ch_G0000111;Parent=HG04160_ch_T0000306;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG04160_ch_T0000306:1;Name=TTTY18;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7395075	7395916	.	-	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG04160_ch_G0000112;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG04160_ch_G0000112;Name=LOC107987340
HG04160_chrY	CAT	transcript	7395075	7395916	1000	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG04160_ch_T0000307;gene_id=HG04160_ch_G0000112;Parent=HG04160_ch_G0000112;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG04160_ch_T0000307;Name=LOC107987340
HG04160_chrY	CAT	exon	7395075	7395459	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG04160_ch_T0000307;gene_id=HG04160_ch_G0000112;Parent=HG04160_ch_T0000307;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG04160_ch_T0000307:0;Name=LOC107987340;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7395460	7395794	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG04160_ch_T0000307;gene_id=HG04160_ch_G0000112;Parent=HG04160_ch_T0000307;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG04160_ch_T0000307:0;Name=LOC107987340;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7395795	7395916	.	-	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG04160_ch_T0000307;gene_id=HG04160_ch_G0000112;Parent=HG04160_ch_T0000307;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG04160_ch_T0000307:1;Name=LOC107987340;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7410829	7417664	.	-	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG04160_ch_G0000113;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG04160_ch_G0000113;Name=LINC00279
HG04160_chrY	CAT	transcript	7410829	7417664	1000	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_G0000113;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG04160_ch_T0000308;Name=LINC00279
HG04160_chrY	CAT	exon	7410829	7410904	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG04160_ch_T0000308:0;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7410905	7411036	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG04160_ch_T0000308:0;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7411037	7411279	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG04160_ch_T0000308:1;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7411280	7411630	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG04160_ch_T0000308:1;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7411631	7411826	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG04160_ch_T0000308:2;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7411827	7417551	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG04160_ch_T0000308:2;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7417552	7417664	.	-	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG04160_ch_T0000308;gene_id=HG04160_ch_G0000113;Parent=HG04160_ch_T0000308;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG04160_ch_T0000308:3;Name=LINC00279;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7493780	7495268	.	+	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG04160_ch_G0000114;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG04160_ch_G0000114;Name=LOC107987354
HG04160_chrY	CAT	transcript	7493780	7495268	1000	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_G0000114;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG04160_ch_T0000309;Name=LOC107987354
HG04160_chrY	CAT	exon	7493780	7493917	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_T0000309;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG04160_ch_T0000309:0;Name=LOC107987354;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7493918	7494881	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_T0000309;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG04160_ch_T0000309:0;Name=LOC107987354;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7494882	7494956	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_T0000309;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG04160_ch_T0000309:1;Name=LOC107987354;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7494957	7495109	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_T0000309;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG04160_ch_T0000309:1;Name=LOC107987354;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7495110	7495268	.	+	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG04160_ch_T0000309;gene_id=HG04160_ch_G0000114;Parent=HG04160_ch_T0000309;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG04160_ch_T0000309:2;Name=LOC107987354;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7504740	7506951	.	+	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG04160_ch_G0000115;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG04160_ch_G0000115;Name=LOC105377232
HG04160_chrY	CAT	transcript	7504740	7506951	1000	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_G0000115;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG04160_ch_T0000310;Name=LOC105377232
HG04160_chrY	CAT	exon	7504740	7504753	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_T0000310;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG04160_ch_T0000310:0;Name=LOC105377232;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7504754	7506175	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_T0000310;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG04160_ch_T0000310:0;Name=LOC105377232;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7506176	7506250	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_T0000310;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG04160_ch_T0000310:1;Name=LOC105377232;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7506251	7506936	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_T0000310;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG04160_ch_T0000310:1;Name=LOC105377232;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7506937	7506951	.	+	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG04160_ch_T0000310;gene_id=HG04160_ch_G0000115;Parent=HG04160_ch_T0000310;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG04160_ch_T0000310:2;Name=LOC105377232;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	7648673	7660940	.	-	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG04160_ch_G0000116;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG04160_ch_G0000116;Name=LOC105377231
HG04160_chrY	CAT	transcript	7648673	7660940	1000	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_G0000116;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG04160_ch_T0000311;Name=LOC105377231
HG04160_chrY	CAT	exon	7648673	7648860	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000311:0;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7648861	7652152	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000311:0;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7652153	7652305	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000311:1;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7652306	7653006	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000311:1;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7653007	7653260	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000311:2;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7653261	7660854	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000311:2;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7660855	7660940	.	-	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG04160_ch_T0000311;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000311;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000311:3;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	7648673	7660940	1000	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_G0000116;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG04160_ch_T0000312;Name=LOC105377231
HG04160_chrY	CAT	exon	7648673	7648860	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000312:0;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7648861	7652152	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000312:0;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7652153	7652305	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000312:1;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7652306	7653016	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000312:1;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7653017	7653260	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000312:2;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	7653261	7660854	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG04160_ch_T0000312:2;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	7660855	7660940	.	-	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG04160_ch_T0000312;gene_id=HG04160_ch_G0000116;Parent=HG04160_ch_T0000312;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG04160_ch_T0000312:3;Name=LOC105377231;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8197215	8225163	.	+	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG04160_ch_G0000117;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG04160_ch_G0000117;Name=LOC105377229
HG04160_chrY	CAT	transcript	8197215	8225163	1000	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_G0000117;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG04160_ch_T0000313;Name=LOC105377229
HG04160_chrY	CAT	exon	8197215	8197283	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG04160_ch_T0000313:0;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8197284	8222875	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG04160_ch_T0000313:0;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8222876	8223000	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG04160_ch_T0000313:1;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8223001	8223568	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG04160_ch_T0000313:1;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8223569	8223740	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG04160_ch_T0000313:2;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8223741	8223887	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG04160_ch_T0000313:2;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8223888	8225163	.	+	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG04160_ch_T0000313;gene_id=HG04160_ch_G0000117;Parent=HG04160_ch_T0000313;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG04160_ch_T0000313:3;Name=LOC105377229;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8245295	8251963	.	-	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG04160_ch_G0000118;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG04160_ch_G0000118;Name=TTTY12
HG04160_chrY	CAT	transcript	8245295	8251963	1000	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_G0000118;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG04160_ch_T0000314;Name=TTTY12
HG04160_chrY	CAT	exon	8245295	8246117	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000314;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000314:0;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8246118	8250898	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000314;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG04160_ch_T0000314:0;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8250899	8251054	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000314;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000314:1;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8251055	8251915	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000314;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG04160_ch_T0000314:1;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8251916	8251963	.	-	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG04160_ch_T0000314;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000314;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000314:2;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8245295	8251963	1000	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_G0000118;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG04160_ch_T0000315;Name=TTTY12
HG04160_chrY	CAT	exon	8245295	8246117	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000315:0;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8246118	8250352	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG04160_ch_T0000315:0;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8250353	8250434	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000315:1;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8250435	8250898	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG04160_ch_T0000315:1;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8250899	8251054	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000315:2;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8251055	8251915	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG04160_ch_T0000315:2;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8251916	8251963	.	-	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG04160_ch_T0000315;gene_id=HG04160_ch_G0000118;Parent=HG04160_ch_T0000315;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG04160_ch_T0000315:3;Name=TTTY12;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8246108	8276521	.	+	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG04160_ch_G0000119;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG04160_ch_G0000119;Name=LOC107987339
HG04160_chrY	CAT	transcript	8246108	8276521	1000	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_G0000119;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG04160_ch_T0000316;Name=LOC107987339
HG04160_chrY	CAT	exon	8246108	8246824	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_T0000316;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG04160_ch_T0000316:0;Name=LOC107987339;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8246825	8250373	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_T0000316;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG04160_ch_T0000316:0;Name=LOC107987339;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8250374	8250483	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_T0000316;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG04160_ch_T0000316:1;Name=LOC107987339;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8250484	8276473	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_T0000316;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG04160_ch_T0000316:1;Name=LOC107987339;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8276474	8276521	.	+	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG04160_ch_T0000316;gene_id=HG04160_ch_G0000119;Parent=HG04160_ch_T0000316;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG04160_ch_T0000316:2;Name=LOC107987339;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8358068	8359958	.	+	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG04160_ch_G0000120;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG04160_ch_G0000120;Name=TTTY16
HG04160_chrY	CAT	transcript	8358068	8359958	1000	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG04160_ch_T0000317;gene_id=HG04160_ch_G0000120;Parent=HG04160_ch_G0000120;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG04160_ch_T0000317;Name=TTTY16
HG04160_chrY	CAT	exon	8358068	8358128	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG04160_ch_T0000317;gene_id=HG04160_ch_G0000120;Parent=HG04160_ch_T0000317;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG04160_ch_T0000317:0;Name=TTTY16;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8358129	8359827	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG04160_ch_T0000317;gene_id=HG04160_ch_G0000120;Parent=HG04160_ch_T0000317;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG04160_ch_T0000317:0;Name=TTTY16;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8359828	8359958	.	+	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG04160_ch_T0000317;gene_id=HG04160_ch_G0000120;Parent=HG04160_ch_T0000317;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG04160_ch_T0000317:1;Name=TTTY16;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8539245	8601246	.	-	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG04160_ch_G0000121;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG04160_ch_G0000121;Name=LOC107987338
HG04160_chrY	CAT	transcript	8539245	8601246	1000	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_G0000121;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG04160_ch_T0000318;Name=LOC107987338
HG04160_chrY	CAT	exon	8539245	8539756	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG04160_ch_T0000318:0;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8539757	8540788	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG04160_ch_T0000318:0;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8540789	8540897	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG04160_ch_T0000318:1;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8540898	8558688	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG04160_ch_T0000318:1;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8558689	8558847	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG04160_ch_T0000318:2;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8558848	8601132	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG04160_ch_T0000318:2;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8601133	8601246	.	-	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG04160_ch_T0000318;gene_id=HG04160_ch_G0000121;Parent=HG04160_ch_T0000318;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG04160_ch_T0000318:3;Name=LOC107987338;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8678296	8785865	.	-	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG04160_ch_G0000122;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG04160_ch_G0000122;Name=PRKY
HG04160_chrY	CAT	transcript	8678296	8785865	1000	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_G0000122;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG04160_ch_T0000319;Name=PRKY
HG04160_chrY	CAT	exon	8678296	8684131	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:0;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8684132	8687953	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:0;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8687954	8688100	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:1;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8688101	8692409	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:1;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8692410	8692487	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:2;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8692488	8703612	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:2;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8703613	8703708	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:3;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8703709	8718607	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:3;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8718608	8718727	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:4;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8718728	8733672	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:4;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8733673	8733936	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:5;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8733937	8755736	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:5;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8755737	8755905	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:6;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8755906	8785358	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG04160_ch_T0000319:6;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8785359	8785865	.	-	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG04160_ch_T0000319;gene_id=HG04160_ch_G0000122;Parent=HG04160_ch_T0000319;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG04160_ch_T0000319:7;Name=PRKY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	8954154	9149976	.	-	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG04160_ch_G0000123;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000123;Name=TBL1Y
HG04160_chrY	CAT	transcript	8954154	9149976	100	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000320;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8959057	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8958872	8959057	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8958872	8958874	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000320;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8959058	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000320:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000320;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9063943	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9063944	9064038	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9064039	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9149737	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000320:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9149738	9149976	.	-	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000320;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000320;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000320:18;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000321;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8959057	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8958872	8959057	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8958872	8958874	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000321;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8959058	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000321;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9063943	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9063944	9064038	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9064039	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000321:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000321;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000321;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000321:18;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000322;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8959057	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8958872	8959057	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8958872	8958874	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000322;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8959058	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000322;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000322:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000322;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000322;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000322:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000323;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8959057	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8958872	8959057	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8958872	8958874	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000323;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8959058	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000323;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000323:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000323;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000323;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000323:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000324;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8954444	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8954436	8954444	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8954436	8954438	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000324;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8954445	8958991	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8958992	8959057	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8958992	8959057	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8959058	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000324:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000324;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000324:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000324;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000324;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000324:18;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000325;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8972555	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972450	8972555	.	-	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8972450	8972452	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000325;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972556	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000325;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000325:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000325;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000325;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000325:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8954154	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000326;Name=TBL1Y
HG04160_chrY	CAT	exon	8954154	8972555	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972450	8972555	.	-	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8972450	8972452	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000326;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972556	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000326;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000326:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000326;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000326;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000326:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8968159	9017232	100	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000327;Name=TBL1Y
HG04160_chrY	CAT	exon	8968159	8968370	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8968350	8968370	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8968350	8968352	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000327;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8968371	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000327:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9017232	.	-	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000327:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016963	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000327:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9016961	9016963	.	-	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000327;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000327;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000327;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8968159	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000328;Name=TBL1Y
HG04160_chrY	CAT	exon	8968159	8968370	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8968350	8968370	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8968350	8968352	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000328;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8968371	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000328:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000328;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9063943	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9063944	9064038	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9064039	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000328:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000328;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000328;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000328:18;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8968159	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000329;Name=TBL1Y
HG04160_chrY	CAT	exon	8968159	8968370	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8968350	8968370	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8968350	8968352	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000329;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8968371	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000329;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9063943	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9063944	9064038	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9064039	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000329:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000329;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000329;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000329:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8968159	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000330;Name=TBL1Y
HG04160_chrY	CAT	exon	8968159	8968370	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8968350	8968370	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8968350	8968352	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000330;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8968371	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000330;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9081598	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9081599	9081629	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9081630	9147668	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9147669	9147753	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9147754	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000330:16;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000330;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000330;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000330:17;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	8968159	9149144	100	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_G0000123;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG04160_ch_T0000331;Name=TBL1Y
HG04160_chrY	CAT	exon	8968159	8968370	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8968350	8968370	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	8968350	8968352	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG04160_ch_T0000331;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8968371	8969651	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:0;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8969652	8969753	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8969652	8969753	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8969754	8972409	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:1;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8972410	8972575	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8972410	8972575	.	-	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8972576	8973424	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:2;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973425	8973552	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973425	8973552	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973553	8973869	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:3;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8973870	8973944	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8973870	8973944	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8973945	8978988	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:4;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8978989	8979110	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8978989	8979110	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8979111	8985221	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:5;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8985222	8985282	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8985222	8985282	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8985283	8988011	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:6;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988012	8988109	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988012	8988109	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988110	8988218	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:7;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988219	8988282	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988219	8988282	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8988283	8988980	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:8;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8988981	8989122	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8988981	8989122	.	-	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989123	8989513	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:9;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8989514	8989646	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8989514	8989646	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8989647	8995692	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:10;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	8995693	8995945	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	8995693	8995945	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	8995946	9016717	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:11;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9016718	9016863	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9016718	9016863	.	-	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9016864	9034699	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:12;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9034700	9034807	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9034700	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG04160_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9034755	9034757	.	-	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG04160_ch_T0000331;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9034808	9038304	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:13;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9038305	9038393	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9038394	9148858	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG04160_ch_T0000331:14;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9148859	9149144	.	-	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000331;gene_id=HG04160_ch_G0000123;Parent=HG04160_ch_T0000331;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG04160_ch_T0000331:15;Name=TBL1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9148089	9193924	.	+	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;gene_id=HG04160_ch_G0000124;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000124;Name=AMELY
HG04160_chrY	CAT	transcript	9148089	9193924	100	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_G0000124;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG04160_ch_T0000332;Name=AMELY
HG04160_chrY	CAT	exon	9148089	9148168	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9148169	9185770	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9185771	9185870	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9185871	9187221	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9187222	9187287	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9187234	9187287	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000332:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9187234	9187236	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG04160_ch_T0000332;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9187288	9189788	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9189789	9189836	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9189789	9189836	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000332:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9189837	9191065	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9191066	9191110	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9191066	9191110	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000332:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9191111	9191379	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9191380	9191805	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:5;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9191380	9191805	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000332:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9191806	9193763	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000332:5;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9193764	9193924	.	+	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000332:6;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9193764	9193769	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000332:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	9193767	9193769	.	+	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000332;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000332;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG04160_ch_T0000332;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	9185815	9193924	100	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_G0000124;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG04160_ch_T0000333;Name=AMELY
HG04160_chrY	CAT	exon	9185815	9185870	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9185871	9187221	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9187222	9187287	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9187234	9187287	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:0;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9187234	9187236	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG04160_ch_T0000333;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9187288	9189788	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9189789	9189836	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9189789	9189836	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:1;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9189837	9190932	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9190933	9190974	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9190933	9190974	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:2;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9190975	9191065	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9191066	9191110	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9191066	9191110	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:3;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9191111	9191379	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9191380	9191805	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:5;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9191380	9191805	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:4;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9191806	9193763	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG04160_ch_T0000333:5;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9193764	9193924	.	+	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG04160_ch_T0000333:6;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9193764	9193769	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG04160_ch_T0000333:5;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	9193767	9193769	.	+	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000333;gene_id=HG04160_ch_G0000124;Parent=HG04160_ch_T0000333;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG04160_ch_T0000333;Name=AMELY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9586235	9588834	.	+	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG04160_ch_G0000125;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG04160_ch_G0000125;Name=TTTY8B
HG04160_chrY	CAT	transcript	9586235	9588834	1000	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_G0000125;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG04160_ch_T0000334;Name=TTTY8B
HG04160_chrY	CAT	exon	9586235	9586370	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_T0000334;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG04160_ch_T0000334:0;Name=TTTY8B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9586371	9586847	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_T0000334;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG04160_ch_T0000334:0;Name=TTTY8B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9586848	9587052	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_T0000334;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG04160_ch_T0000334:1;Name=TTTY8B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9587053	9588644	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_T0000334;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG04160_ch_T0000334:1;Name=TTTY8B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9588645	9588834	.	+	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG04160_ch_T0000334;gene_id=HG04160_ch_G0000125;Parent=HG04160_ch_T0000334;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG04160_ch_T0000334:2;Name=TTTY8B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9601955	9610393	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;gene_id=HG04160_ch_G0000126;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG04160_ch_G0000126;Name=TTTY7B
HG04160_chrY	CAT	transcript	9601955	9610393	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_G0000126;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG04160_ch_T0000335;Name=TTTY7B
HG04160_chrY	CAT	exon	9601955	9602200	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:0;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9602201	9603675	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG04160_ch_T0000335:0;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9603676	9603789	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:1;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9603790	9605706	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG04160_ch_T0000335:1;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9605707	9606183	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:2;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9606184	9606871	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG04160_ch_T0000335:2;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9606872	9606946	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:3;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9606947	9609253	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG04160_ch_T0000335:3;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9609254	9609415	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:4;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9609416	9610356	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG04160_ch_T0000335:4;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9610357	9610393	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG04160_ch_T0000335;gene_id=HG04160_ch_G0000126;Parent=HG04160_ch_T0000335;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG04160_ch_T0000335:5;Name=TTTY7B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9612784	9616427	.	-	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_82.1;gene_id=HG04160_ch_G0000127;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG04160_ch_G0000127;Name=TTTY21
HG04160_chrY	CAT	transcript	9612784	9616427	1000	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=HG04160_ch_T0000336;gene_id=HG04160_ch_G0000127;Parent=HG04160_ch_G0000127;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG04160_ch_T0000336;Name=TTTY21
HG04160_chrY	CAT	exon	9612784	9612888	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=HG04160_ch_T0000336;gene_id=HG04160_ch_G0000127;Parent=HG04160_ch_T0000336;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG04160_ch_T0000336:0;Name=TTTY21;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9612889	9616225	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=HG04160_ch_T0000336;gene_id=HG04160_ch_G0000127;Parent=HG04160_ch_T0000336;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG04160_ch_T0000336:0;Name=TTTY21;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9616226	9616427	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_82.1;transcript_id=HG04160_ch_T0000336;gene_id=HG04160_ch_G0000127;Parent=HG04160_ch_T0000336;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG04160_ch_T0000336:1;Name=TTTY21;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9631417	9653619	.	+	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1;gene_id=HG04160_ch_G0000128;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG04160_ch_G0000128;Name=TTTY2B
HG04160_chrY	CAT	transcript	9631417	9653619	1000	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_G0000128;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG04160_ch_T0000337;Name=TTTY2B
HG04160_chrY	CAT	exon	9631417	9631621	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:0;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9631622	9637455	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:0;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9637456	9637533	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:1;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9637534	9640009	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:1;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9640010	9640096	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:2;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9640097	9647491	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:2;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9647492	9647640	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:3;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9647641	9648332	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:3;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9648333	9648489	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:4;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9648490	9651319	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:4;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9651320	9651398	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:5;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9651399	9651518	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:5;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9651519	9651716	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:6;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9651717	9652939	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG04160_ch_T0000337:6;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9652940	9653619	.	+	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1;transcript_id=HG04160_ch_T0000337;gene_id=HG04160_ch_G0000128;Parent=HG04160_ch_T0000337;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG04160_ch_T0000337:7;Name=TTTY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9648299	9669462	.	-	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1;gene_id=HG04160_ch_G0000129;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG04160_ch_G0000129;Name=TTTY1
HG04160_chrY	CAT	transcript	9648299	9669462	1000	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_G0000129;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG04160_ch_T0000338;Name=TTTY1
HG04160_chrY	CAT	exon	9648299	9648556	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG04160_ch_T0000338:0;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9648557	9656137	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG04160_ch_T0000338:0;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9656138	9656275	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG04160_ch_T0000338:1;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9656276	9658631	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG04160_ch_T0000338:1;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9658632	9658740	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG04160_ch_T0000338:2;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9658741	9665603	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG04160_ch_T0000338:2;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9665604	9665763	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG04160_ch_T0000338:3;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9665764	9669187	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG04160_ch_T0000338:3;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9669188	9669462	.	-	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1;transcript_id=HG04160_ch_T0000338;gene_id=HG04160_ch_G0000129;Parent=HG04160_ch_T0000338;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG04160_ch_T0000338:4;Name=TTTY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9689933	9693240	.	+	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1;gene_id=HG04160_ch_G0000130;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG04160_ch_G0000130;Name=LOC107987342
HG04160_chrY	CAT	transcript	9689933	9693240	1000	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_G0000130;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG04160_ch_T0000339;Name=LOC107987342
HG04160_chrY	CAT	exon	9689933	9690111	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_T0000339;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG04160_ch_T0000339:0;Name=LOC107987342;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9690112	9690487	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_T0000339;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG04160_ch_T0000339:0;Name=LOC107987342;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9690488	9690560	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_T0000339;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG04160_ch_T0000339:1;Name=LOC107987342;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9690561	9693091	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_T0000339;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG04160_ch_T0000339:1;Name=LOC107987342;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9693092	9693240	.	+	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1;transcript_id=HG04160_ch_T0000339;gene_id=HG04160_ch_G0000130;Parent=HG04160_ch_T0000339;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG04160_ch_T0000339:2;Name=LOC107987342;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9696296	9708384	.	+	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=HG04160_ch_G0000131;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG04160_ch_G0000131;Name=TTTY22
HG04160_chrY	CAT	transcript	9696296	9708384	1000	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_G0000131;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG04160_ch_T0000340;Name=TTTY22
HG04160_chrY	CAT	exon	9696296	9696450	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG04160_ch_T0000340:0;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9696451	9699912	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG04160_ch_T0000340:0;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9699913	9700024	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG04160_ch_T0000340:1;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9700025	9704449	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG04160_ch_T0000340:1;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9704450	9704524	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG04160_ch_T0000340:2;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9704525	9705209	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG04160_ch_T0000340:2;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9705210	9705248	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG04160_ch_T0000340:3;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9705249	9708338	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG04160_ch_T0000340:3;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9708339	9708384	.	+	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG04160_ch_T0000340;gene_id=HG04160_ch_G0000131;Parent=HG04160_ch_T0000340;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG04160_ch_T0000340:4;Name=TTTY22;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9708454	9712680	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG04160_ch_G0000132;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG04160_ch_G0000132;Name=LINC00280
HG04160_chrY	CAT	transcript	9708454	9712680	1000	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_G0000132;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG04160_ch_T0000341;Name=LINC00280
HG04160_chrY	CAT	exon	9708454	9708539	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_T0000341;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000341:0;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9708540	9711040	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_T0000341;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG04160_ch_T0000341:0;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9711041	9711183	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_T0000341;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000341:1;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9711184	9712461	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_T0000341;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG04160_ch_T0000341:1;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9712462	9712680	.	+	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG04160_ch_T0000341;gene_id=HG04160_ch_G0000132;Parent=HG04160_ch_T0000341;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG04160_ch_T0000341:2;Name=LINC00280;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9803204	9803351	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;gene_id=HG04160_ch_G0000133;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=transMap_pairwise;ID=HG04160_ch_G0000133;Name=TSPY2
HG04160_chrY	CAT	transcript	9803204	9803351	10000	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG04160_ch_T0000342;gene_id=HG04160_ch_G0000133;Parent=HG04160_ch_G0000133;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG04160_ch_T0000342;Name=TSPY2
HG04160_chrY	CAT	exon	9803204	9803351	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG04160_ch_T0000342;gene_id=HG04160_ch_G0000133;Parent=HG04160_ch_T0000342;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG04160_ch_T0000342:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	9803204	9803305	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG04160_ch_T0000342;gene_id=HG04160_ch_G0000133;Parent=HG04160_ch_T0000342;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG04160_ch_T0000342:0;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	9803204	9803206	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG04160_ch_T0000342;gene_id=HG04160_ch_G0000133;Parent=HG04160_ch_T0000342;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG04160_ch_T0000342;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	9803303	9803305	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.3;transcript_id=HG04160_ch_T0000342;gene_id=HG04160_ch_G0000133;Parent=HG04160_ch_T0000342;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG04160_ch_T0000342;Name=TSPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	9805964	9807128	.	+	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1;gene_id=HG04160_ch_G0000134;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG04160_ch_G0000134;Name=TTTY23
HG04160_chrY	CAT	transcript	9805964	9807128	1000	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_G0000134;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG04160_ch_T0000343;Name=TTTY23
HG04160_chrY	CAT	exon	9805964	9806020	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_T0000343;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG04160_ch_T0000343:0;Name=TTTY23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9806021	9806133	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_T0000343;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG04160_ch_T0000343:0;Name=TTTY23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9806134	9806279	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_T0000343;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG04160_ch_T0000343:1;Name=TTTY23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	9806280	9806819	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_T0000343;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG04160_ch_T0000343:1;Name=TTTY23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	9806820	9807128	.	+	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1;transcript_id=HG04160_ch_T0000343;gene_id=HG04160_ch_G0000134;Parent=HG04160_ch_T0000343;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG04160_ch_T0000343:2;Name=TTTY23;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	11172732	11175746	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG04160_ch_G0000135;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG04160_ch_G0000135;Name=LOC124904996
HG04160_chrY	CAT	transcript	11172732	11175746	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG04160_ch_T0000344;gene_id=HG04160_ch_G0000135;Parent=HG04160_ch_G0000135;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG04160_ch_T0000344;Name=LOC124904996
HG04160_chrY	CAT	exon	11172732	11173997	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG04160_ch_T0000344;gene_id=HG04160_ch_G0000135;Parent=HG04160_ch_T0000344;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG04160_ch_T0000344:0;Name=LOC124904996;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	11173998	11175324	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG04160_ch_T0000344;gene_id=HG04160_ch_G0000135;Parent=HG04160_ch_T0000344;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG04160_ch_T0000344:0;Name=LOC124904996;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	11175325	11175746	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG04160_ch_T0000344;gene_id=HG04160_ch_G0000135;Parent=HG04160_ch_T0000344;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG04160_ch_T0000344:1;Name=LOC124904996;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	11258266	11266623	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG04160_ch_G0000136;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG04160_ch_G0000136;Name=LOC105379273
HG04160_chrY	CAT	transcript	11258266	11266623	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_G0000136;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG04160_ch_T0000345;Name=LOC105379273
HG04160_chrY	CAT	exon	11258266	11258307	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_T0000345;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG04160_ch_T0000345:0;Name=LOC105379273;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	11258308	11264369	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_T0000345;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG04160_ch_T0000345:0;Name=LOC105379273;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	11264370	11264428	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_T0000345;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG04160_ch_T0000345:1;Name=LOC105379273;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	11264429	11266563	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_T0000345;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG04160_ch_T0000345:1;Name=LOC105379273;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	11266564	11266623	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG04160_ch_T0000345;gene_id=HG04160_ch_G0000136;Parent=HG04160_ch_T0000345;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG04160_ch_T0000345:2;Name=LOC105379273;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13157818	13165432	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=HG04160_ch_G0000137;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG04160_ch_G0000137;Name=LOC112268312
HG04160_chrY	CAT	transcript	13157818	13165432	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_G0000137;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000346;Name=LOC112268312
HG04160_chrY	CAT	exon	13157818	13157907	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000346;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000346:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13157908	13158093	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000346;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000346:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13158094	13158255	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000346;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000346:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13158256	13164233	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000346;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000346:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13164234	13165432	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000346;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000346;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000346:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13157818	13164369	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_G0000137;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000347;Name=LOC112268312
HG04160_chrY	CAT	exon	13157818	13157907	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000347;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000347:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13157908	13158093	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000347;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000347:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13158094	13158255	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000347;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000347:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13158256	13164233	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000347;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000347:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13164234	13164369	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000347;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000347;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000347:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13157941	13165432	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_G0000137;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000348;Name=LOC112268312
HG04160_chrY	CAT	exon	13157941	13157959	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000348;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000348:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13157960	13158093	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000348;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000348:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13158094	13158255	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000348;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000348:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13158256	13164233	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000348;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000348:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13164234	13165432	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG04160_ch_T0000348;gene_id=HG04160_ch_G0000137;Parent=HG04160_ch_T0000348;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000348:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13200623	13209557	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG04160_ch_G0000138;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG04160_ch_G0000138;Name=LOC107987343
HG04160_chrY	CAT	transcript	13200623	13209557	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_G0000138;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG04160_ch_T0000349;Name=LOC107987343
HG04160_chrY	CAT	exon	13200623	13202015	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_T0000349;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG04160_ch_T0000349:0;Name=LOC107987343;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13202016	13204577	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_T0000349;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG04160_ch_T0000349:0;Name=LOC107987343;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13204578	13204704	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_T0000349;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG04160_ch_T0000349:1;Name=LOC107987343;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13204705	13207661	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_T0000349;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG04160_ch_T0000349:1;Name=LOC107987343;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13207662	13209557	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG04160_ch_T0000349;gene_id=HG04160_ch_G0000138;Parent=HG04160_ch_T0000349;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG04160_ch_T0000349:2;Name=LOC107987343;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13252152	13267626	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG04160_ch_G0000139;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG04160_ch_G0000139;Name=GYG2P1
HG04160_chrY	CAT	transcript	13252152	13267626	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_G0000139;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG04160_ch_T0000350;Name=GYG2P1
HG04160_chrY	CAT	exon	13252152	13252536	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG04160_ch_T0000350:0;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13252537	13252831	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG04160_ch_T0000350:0;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13252832	13252973	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG04160_ch_T0000350:1;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13252974	13253228	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG04160_ch_T0000350:1;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13253229	13253345	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG04160_ch_T0000350:2;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13253346	13266351	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG04160_ch_T0000350:2;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13266352	13266490	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG04160_ch_T0000350:3;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13266491	13267585	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG04160_ch_T0000350:3;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13267586	13267626	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG04160_ch_T0000350;gene_id=HG04160_ch_G0000139;Parent=HG04160_ch_T0000350;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG04160_ch_T0000350:4;Name=GYG2P1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13507555	13509722	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG04160_ch_G0000140;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG04160_ch_G0000140;Name=LOC112268311
HG04160_chrY	CAT	transcript	13507555	13509722	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG04160_ch_T0000351;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_G0000140;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG04160_ch_T0000351;Name=LOC112268311
HG04160_chrY	CAT	exon	13507555	13508990	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG04160_ch_T0000351;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000351;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG04160_ch_T0000351:0;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508991	13509599	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG04160_ch_T0000351;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000351;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG04160_ch_T0000351:0;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13509600	13509722	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG04160_ch_T0000351;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000351;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG04160_ch_T0000351:1;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13507555	13509731	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG04160_ch_T0000352;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_G0000140;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG04160_ch_T0000352;Name=LOC112268311
HG04160_chrY	CAT	exon	13507555	13508990	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG04160_ch_T0000352;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000352;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG04160_ch_T0000352:0;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508991	13509542	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG04160_ch_T0000352;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000352;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG04160_ch_T0000352:0;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13509543	13509731	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG04160_ch_T0000352;gene_id=HG04160_ch_G0000140;Parent=HG04160_ch_T0000352;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG04160_ch_T0000352:1;Name=LOC112268311;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13508591	13538471	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG04160_ch_G0000141;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG04160_ch_G0000141;Name=TTTY15
HG04160_chrY	CAT	transcript	13508591	13538471	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_G0000141;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG04160_ch_T0000353;Name=TTTY15
HG04160_chrY	CAT	exon	13508591	13508945	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000353:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508946	13510878	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000353:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13510879	13510925	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000353:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13510926	13532750	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000353:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13532751	13532844	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000353:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13532845	13533701	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000353:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13533702	13538471	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG04160_ch_T0000353;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000353;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000353:3;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13508591	13538471	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_G0000141;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG04160_ch_T0000354;Name=TTTY15
HG04160_chrY	CAT	exon	13508591	13508945	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000354;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000354:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508946	13532750	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000354;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000354:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13532751	13532844	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000354;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000354:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13532845	13533701	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000354;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000354:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13533702	13538471	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG04160_ch_T0000354;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000354;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000354:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13508591	13538471	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_G0000141;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG04160_ch_T0000355;Name=TTTY15
HG04160_chrY	CAT	exon	13508591	13508945	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000355;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000355:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508946	13532750	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000355;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000355:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13532751	13532844	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000355;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000355:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13532845	13533922	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000355;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000355:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13533923	13538471	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG04160_ch_T0000355;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000355;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000355:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13508591	13538471	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_G0000141;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG04160_ch_T0000356;Name=TTTY15
HG04160_chrY	CAT	exon	13508591	13508945	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000356:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508946	13510878	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000356:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13510879	13510925	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000356:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13510926	13532750	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000356:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13532751	13532844	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000356:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13532845	13533922	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000356:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13533923	13538471	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG04160_ch_T0000356;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000356;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000356:3;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13508591	13538471	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_G0000141;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG04160_ch_T0000357;Name=TTTY15
HG04160_chrY	CAT	exon	13508591	13508945	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000357:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13508946	13510878	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000357:0;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13510879	13510925	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000357:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13510926	13532750	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000357:1;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13532751	13532844	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000357:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13532845	13536563	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG04160_ch_T0000357:2;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13536564	13538471	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG04160_ch_T0000357;gene_id=HG04160_ch_G0000141;Parent=HG04160_ch_T0000357;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG04160_ch_T0000357:3;Name=TTTY15;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13547469	13707076	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG04160_ch_G0000142;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000142;Name=USP9Y
HG04160_chrY	CAT	transcript	13547469	13707076	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_G0000142;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG04160_ch_T0000358;Name=USP9Y
HG04160_chrY	CAT	exon	13547469	13548293	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13548294	13554871	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13554872	13554931	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13554932	13555625	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13555626	13555781	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13555686	13555781	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	13555686	13555688	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG04160_ch_T0000358;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13555782	13566826	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13566827	13566975	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13566827	13566975	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13566976	13568344	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13568345	13568424	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13568345	13568424	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13568425	13571349	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13571350	13571462	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13571350	13571462	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13571463	13572811	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13572812	13573030	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13572812	13573030	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13573031	13581848	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13581849	13581964	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13581849	13581964	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13581965	13582234	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582235	13582486	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582235	13582486	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582487	13582647	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582648	13582786	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582648	13582786	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582787	13584393	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13584394	13584546	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13584394	13584546	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13584547	13585761	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13585762	13585866	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13585762	13585866	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13585867	13603428	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13603429	13603635	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13603429	13603635	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13603636	13604742	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13604743	13604879	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13604743	13604879	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13604880	13606720	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13606721	13606854	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13606721	13606854	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13606855	13617302	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13617303	13617390	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13617303	13617390	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13617391	13619817	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13619818	13620160	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13619818	13620160	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13620161	13621705	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13621706	13621801	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13621706	13621801	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13621802	13622883	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13622884	13623095	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13622884	13623095	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13623096	13624253	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624254	13624494	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624254	13624494	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624495	13624840	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624841	13624990	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624841	13624990	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624991	13625760	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13625761	13625881	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13625761	13625881	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13625882	13632437	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632438	13632568	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632438	13632568	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13632569	13632756	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632757	13633035	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632757	13633035	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13633036	13636641	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13636642	13636767	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13636642	13636767	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13636768	13637733	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13637734	13637859	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13637734	13637859	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13637860	13639266	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13639267	13639436	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13639267	13639436	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13639437	13656414	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656415	13656523	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656415	13656523	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13656524	13656907	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656908	13657054	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656908	13657054	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13657055	13657870	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13657871	13658017	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13657871	13658017	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13658018	13659065	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13659066	13659288	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13659066	13659288	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13659289	13662359	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13662360	13662580	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13662360	13662580	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13662581	13664655	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13664656	13664846	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13664656	13664846	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13664847	13679924	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13679925	13680098	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13679925	13680098	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13680099	13684147	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13684148	13684289	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13684148	13684289	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13684290	13686100	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13686101	13686851	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13686101	13686851	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13686852	13687246	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13687247	13687370	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13687247	13687370	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13687371	13688476	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13688477	13688702	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13688477	13688702	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13688703	13689300	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13689301	13689430	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13689301	13689430	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13689431	13692569	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13692570	13692755	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13692570	13692755	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13692756	13693169	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693170	13693390	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693170	13693390	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693391	13693475	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693476	13693564	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693476	13693564	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693565	13702576	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702577	13702733	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702577	13702733	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13702734	13702869	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702870	13703082	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702870	13703082	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703083	13703802	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13703803	13703898	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:44;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13703803	13703898	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703899	13705515	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000358:44;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13705516	13707076	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000358:45;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13705516	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000358:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	13705651	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000358;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000358;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG04160_ch_T0000358;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13554091	13707076	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_G0000142;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG04160_ch_T0000359;Name=USP9Y
HG04160_chrY	CAT	exon	13554091	13554119	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13554120	13554871	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13554872	13554931	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13554932	13555625	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13555626	13555781	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13555686	13555781	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	13555686	13555688	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG04160_ch_T0000359;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13555782	13566826	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13566827	13566975	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13566827	13566975	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13566976	13568344	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13568345	13568424	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13568345	13568424	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13568425	13571349	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13571350	13571462	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13571350	13571462	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13571463	13572811	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13572812	13573030	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13572812	13573030	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13573031	13581848	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13581849	13581964	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13581849	13581964	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13581965	13582234	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582235	13582486	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582235	13582486	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582487	13582647	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582648	13582786	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582648	13582786	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582787	13584393	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13584394	13584546	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13584394	13584546	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13584547	13585761	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13585762	13585866	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13585762	13585866	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13585867	13603428	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13603429	13603635	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13603429	13603635	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13603636	13604742	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13604743	13604879	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13604743	13604879	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13604880	13606720	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13606721	13606854	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13606721	13606854	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13606855	13617302	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13617303	13617390	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13617303	13617390	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13617391	13619817	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13619818	13620160	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13619818	13620160	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13620161	13621705	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13621706	13621801	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13621706	13621801	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13621802	13622883	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13622884	13623095	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13622884	13623095	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13623096	13624253	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624254	13624494	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624254	13624494	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624495	13624840	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624841	13624990	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624841	13624990	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624991	13625760	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13625761	13625881	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13625761	13625881	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13625882	13632437	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632438	13632568	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632438	13632568	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13632569	13632756	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632757	13633035	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632757	13633035	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13633036	13636641	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13636642	13636767	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13636642	13636767	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13636768	13637733	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13637734	13637859	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13637734	13637859	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13637860	13639266	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13639267	13639436	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13639267	13639436	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13639437	13656414	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656415	13656523	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656415	13656523	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13656524	13656907	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656908	13657054	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656908	13657054	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13657055	13657870	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13657871	13658017	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13657871	13658017	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13658018	13659065	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13659066	13659288	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13659066	13659288	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13659289	13662359	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13662360	13662580	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13662360	13662580	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13662581	13664655	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13664656	13664846	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13664656	13664846	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13664847	13679924	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13679925	13680098	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13679925	13680098	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13680099	13684147	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13684148	13684289	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13684148	13684289	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13684290	13686100	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13686101	13686851	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13686101	13686851	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13686852	13687246	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13687247	13687370	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13687247	13687370	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13687371	13688476	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13688477	13688702	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13688477	13688702	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13688703	13689300	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13689301	13689430	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13689301	13689430	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13689431	13692569	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13692570	13692755	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13692570	13692755	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13692756	13693169	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693170	13693390	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693170	13693390	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693391	13693475	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693476	13693564	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693476	13693564	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693565	13702576	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702577	13702733	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702577	13702733	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13702734	13702869	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702870	13703082	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702870	13703082	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703083	13703802	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13703803	13703898	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:44;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13703803	13703898	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703899	13705515	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000359:44;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13705516	13707076	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000359:45;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13705516	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000359:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	13705651	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000359;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000359;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG04160_ch_T0000359;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13555694	13707076	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_G0000142;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG04160_ch_T0000360;Name=USP9Y
HG04160_chrY	CAT	exon	13555694	13555781	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13555782	13560876	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13560877	13561027	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13561028	13566826	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13566827	13566975	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13566965	13566975	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:0;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	13566965	13566967	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG04160_ch_T0000360;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13566976	13568344	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13568345	13568424	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13568345	13568424	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:1;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13568425	13571349	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13571350	13571462	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13571350	13571462	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:2;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13571463	13572811	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13572812	13573030	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13572812	13573030	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:3;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13573031	13581848	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13581849	13581964	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13581849	13581964	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:4;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13581965	13582234	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582235	13582486	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582235	13582486	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:5;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582487	13582647	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13582648	13582786	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13582648	13582786	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:6;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13582787	13584393	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13584394	13584546	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13584394	13584546	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:7;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13584547	13585761	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13585762	13585866	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13585762	13585866	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:8;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13585867	13603428	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13603429	13603635	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13603429	13603635	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:9;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13603636	13604742	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13604743	13604879	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13604743	13604879	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:10;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13604880	13606720	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13606721	13606854	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13606721	13606854	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:11;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13606855	13617302	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13617303	13617390	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13617303	13617390	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:12;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13617391	13619817	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13619818	13620160	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13619818	13620160	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:13;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13620161	13621705	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13621706	13621801	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13621706	13621801	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:14;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13621802	13622883	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13622884	13623095	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13622884	13623095	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:15;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13623096	13624253	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624254	13624494	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624254	13624494	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:16;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624495	13624840	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13624841	13624990	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13624841	13624990	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:17;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13624991	13625760	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13625761	13625881	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13625761	13625881	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:18;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13625882	13632437	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632438	13632568	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632438	13632568	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:19;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13632569	13632756	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13632757	13633035	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13632757	13633035	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:20;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13633036	13636641	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13636642	13636767	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13636642	13636767	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:21;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13636768	13637733	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13637734	13637859	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13637734	13637859	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:22;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13637860	13639266	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13639267	13639436	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13639267	13639436	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:23;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13639437	13656414	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656415	13656523	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656415	13656523	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:24;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13656524	13656907	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13656908	13657054	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13656908	13657054	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:25;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13657055	13657870	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13657871	13658017	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13657871	13658017	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:26;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13658018	13659065	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13659066	13659288	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13659066	13659288	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:27;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13659289	13662359	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13662360	13662580	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13662360	13662580	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:28;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13662581	13664655	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13664656	13664846	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13664656	13664846	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:29;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13664847	13679924	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13679925	13680098	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13679925	13680098	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:30;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13680099	13684147	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13684148	13684289	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13684148	13684289	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:31;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13684290	13686100	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13686101	13686851	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13686101	13686851	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:32;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13686852	13687246	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13687247	13687370	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13687247	13687370	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:33;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13687371	13688476	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13688477	13688702	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13688477	13688702	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:34;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13688703	13689300	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13689301	13689430	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13689301	13689430	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:35;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13689431	13692569	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13692570	13692755	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13692570	13692755	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:36;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13692756	13693169	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693170	13693390	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693170	13693390	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:37;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693391	13693475	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13693476	13693564	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13693476	13693564	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:38;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13693565	13702576	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702577	13702733	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702577	13702733	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:39;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13702734	13702869	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13702870	13703082	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13702870	13703082	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:40;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703083	13703802	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13703803	13703898	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13703803	13703898	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:41;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13703899	13705515	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG04160_ch_T0000360:43;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13705516	13707076	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG04160_ch_T0000360:44;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13705516	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG04160_ch_T0000360:42;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	13705651	13705653	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000360;gene_id=HG04160_ch_G0000142;Parent=HG04160_ch_T0000360;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG04160_ch_T0000360;Name=USP9Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13751117	13766728	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;gene_id=HG04160_ch_G0000143;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG04160_ch_G0000143;Name=DDX3Y
HG04160_chrY	CAT	transcript	13751117	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000361;Name=DDX3Y
HG04160_chrY	CAT	exon	13751117	13751230	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13751231	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000361:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000361;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000361;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000361:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751117	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000362;Name=DDX3Y
HG04160_chrY	CAT	exon	13751117	13751230	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13751231	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13760898	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760899	13761132	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761133	13761231	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761232	13761315	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761316	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000362:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000362;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000362;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000362:14;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751117	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000363;Name=DDX3Y
HG04160_chrY	CAT	exon	13751117	13751230	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13751231	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000363:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000363;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000363;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000363:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751117	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000364;Name=DDX3Y
HG04160_chrY	CAT	exon	13751117	13751230	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13751231	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763225	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763226	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000364:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000364;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000364;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000364:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751117	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000365;Name=DDX3Y
HG04160_chrY	CAT	exon	13751117	13751230	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13751231	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13760898	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760899	13761132	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761133	13761231	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761232	13761332	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761333	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000365:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000365;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000365;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000365:14;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751954	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000366;Name=DDX3Y
HG04160_chrY	CAT	exon	13751954	13752064	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13752065	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13760898	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760899	13761132	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761133	13761231	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761232	13761315	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761316	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000366:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000366;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000366;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000366:14;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13751954	13766728	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG04160_ch_T0000367;Name=DDX3Y
HG04160_chrY	CAT	exon	13751954	13752064	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13752065	13753785	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13753786	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758087	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758088	13758217	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13758218	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000367:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000367;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000367;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000367:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13753818	13766728	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_G0000143;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG04160_ch_T0000368;Name=DDX3Y
HG04160_chrY	CAT	exon	13753818	13753843	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13753844	13755608	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13755609	13755656	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13755657	13758975	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13758976	13759311	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13759312	13759966	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13759967	13760102	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13759982	13760102	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:0;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	13759982	13759984	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG04160_ch_T0000368;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760103	13760812	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13760813	13760898	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13760813	13760898	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:1;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13760899	13761132	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761133	13761231	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13761133	13761231	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:2;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761232	13761315	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761316	13761476	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13761316	13761476	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:3;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13761477	13761878	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13761879	13762023	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13761879	13762023	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:4;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762024	13762131	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762132	13762276	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13762132	13762276	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:5;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762277	13762509	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762510	13762691	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13762510	13762691	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:6;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762692	13762766	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13762767	13762884	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13762767	13762884	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:7;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13762885	13763156	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763157	13763310	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13763157	13763310	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:8;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763311	13763652	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:11;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13763653	13763792	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13763653	13763792	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:9;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13763793	13764292	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG04160_ch_T0000368:12;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13764293	13766728	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG04160_ch_T0000368:13;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	13764293	13764372	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG04160_ch_T0000368:10;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	13764370	13764372	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000368;gene_id=HG04160_ch_G0000143;Parent=HG04160_ch_T0000368;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG04160_ch_T0000368;Name=DDX3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	13957574	13971890	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=HG04160_ch_G0000144;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=HG04160_ch_G0000144;Name=LOC112268312
HG04160_chrY	CAT	transcript	13957574	13965157	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_G0000144;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000369;Name=LOC112268312
HG04160_chrY	CAT	exon	13957574	13957662	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000369:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13957663	13957848	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000369:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13957849	13958011	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000369:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13958012	13963958	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000369:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13963959	13965157	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG04160_ch_T0000369;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000369;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000369:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13957574	13971890	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_G0000144;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000370;Name=LOC112268312
HG04160_chrY	CAT	exon	13957574	13957662	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000370:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13957663	13957848	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000370:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13957849	13958011	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000370:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13958012	13963958	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000370:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13963959	13964095	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000370:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13964096	13971523	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000370:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13971524	13971890	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG04160_ch_T0000370;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000370;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000370:3;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	13957696	13965157	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_G0000144;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG04160_ch_T0000371;Name=LOC112268312
HG04160_chrY	CAT	exon	13957696	13957714	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000371;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000371:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13957715	13957848	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000371;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000371:0;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13957849	13958011	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000371;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000371:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	13958012	13963958	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000371;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG04160_ch_T0000371:1;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	13963959	13965157	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG04160_ch_T0000371;gene_id=HG04160_ch_G0000144;Parent=HG04160_ch_T0000371;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG04160_ch_T0000371:2;Name=LOC112268312;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	14080128	14326892	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG04160_ch_G0000145;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG04160_ch_G0000145;Name=UTY
HG04160_chrY	CAT	transcript	14080128	14326255	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000372;Name=UTY
HG04160_chrY	CAT	exon	14080128	14081059	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14081060	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000372:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326255	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000372;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000372;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000372:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000373;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000373:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000373;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000373;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000373:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000374;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000374:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000374;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000374;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000374:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000375;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14151880	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151881	14151948	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151949	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215488	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215489	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000375:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000375;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000375;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000375:29;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000376;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14180445	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14180446	14180568	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14180569	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000376:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000376;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000376;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000376:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000377;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201756	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201757	14201865	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201866	14201931	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201932	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000377:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000377;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000377;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000377:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000378;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182028	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182029	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000378:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000378;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000378;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000378:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000379;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000379:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000379;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000379;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000379:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000380;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14322124	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14322125	14322247	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14322248	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000380:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000380;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000380;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000380:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000381;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182028	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182029	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000381:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000381;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000381;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000381:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000382;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14124468	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14124469	14124573	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14124574	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206708	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206709	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000382:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000382;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000382;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000382:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000383;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204538	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204539	14204674	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204675	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000383:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000383;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000383;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000383:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000384;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204538	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204539	14204749	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204750	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000384:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000384;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000384;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000384:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000385;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14151880	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151881	14151948	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151949	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206708	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206709	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000385:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000385;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000385;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000385:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000386;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201756	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201757	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000386:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000386;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000386;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000386:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000387;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14151880	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151881	14151948	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151949	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000387:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000387;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000387;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000387:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000388;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000388:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000388;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000388;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000388:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000389;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000389:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000389;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000389;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000389:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000390;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000390:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000390;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000390;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000390:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000391;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146228	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146229	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204781	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204782	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14246169	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14246170	14246283	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14246284	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000391:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000391;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000391;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000391:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000392;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146228	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146229	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204749	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204750	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000392:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000392;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000392;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000392:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000393;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151713	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151714	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14246169	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14246170	14246283	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14246284	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000393:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000393;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000393;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000393:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000394;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14150409	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14150410	14150438	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14150439	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172570	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172571	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000394:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000394;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000394;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000394:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000395;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146204	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146205	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201320	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201321	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:29;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000395:29;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000395;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000395;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000395:30;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000396;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204749	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204750	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000396:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000396;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000396;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000396:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000397;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000397:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000397;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000397;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000397:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000398;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172570	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172571	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000398:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000398;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000398;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000398:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000399;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000399:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000399;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000399;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000399:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000400;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146228	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146229	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000400:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000400;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000400;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000400:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000401;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14246169	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14246170	14246283	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14246284	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000401:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000401;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000401;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000401:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000402;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000402:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000402;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000402;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000402:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000403;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000403:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000403;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000403;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000403:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000404;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182028	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182029	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000404:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000404;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000404;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000404:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000405;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201013	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201014	14201061	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201062	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000405:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000405;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000405;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000405:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000406;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169329	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169330	14169596	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169597	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000406:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000406;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000406;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000406:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000407;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146204	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146205	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000407:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000407;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000407;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000407:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000408;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146228	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146229	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14285918	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14285919	14285998	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14285999	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000408:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000408;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000408;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000408:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000409;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201602	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201603	14201756	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201757	14201865	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201866	14201931	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201932	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204781	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204782	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000409:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000409;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000409;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000409:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000410;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172570	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172571	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000410:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000410;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000410;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000410:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000411;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215488	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215489	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000411:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000411;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000411;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000411:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000412;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201013	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201014	14201061	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201062	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204781	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204782	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000412:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000412;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000412;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000412:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000413;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097234	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097235	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204749	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204750	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000413:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000413;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000413;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000413:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000414;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215488	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215489	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000414:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000414;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000414;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000414:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000415;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000415:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000415;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000415;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000415:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000416;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172570	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172571	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000416:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000416;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000416;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000416:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000417;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14151880	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151881	14151948	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151949	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000417:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000417;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000417;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000417:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000418;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14124468	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14124469	14124573	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14124574	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000418:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000418;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000418;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000418:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000419;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182028	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182029	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000419:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000419;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000419;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000419:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000420;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204749	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204750	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000420:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000420;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000420;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000420:28;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000421;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14250014	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14250015	14250120	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14250121	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000421:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000421;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000421;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000421:27;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000422;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000422:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000422;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000422;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000422:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14094612	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000423;Name=UTY
HG04160_chrY	CAT	exon	14094612	14096115	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14096116	14097249	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14097250	14097420	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14097421	14106510	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14106511	14106637	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14106638	14143934	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14143935	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206171	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206172	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000423:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000423;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000423;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000423:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14143737	14326255	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000424;Name=UTY
HG04160_chrY	CAT	exon	14143737	14144076	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14144077	14145184	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14145185	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146204	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146205	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000424:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326255	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000424;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000424;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000424:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14145318	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000425;Name=UTY
HG04160_chrY	CAT	exon	14145318	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146204	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146205	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201013	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201014	14201061	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201062	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000425;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000425:26;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14145354	14326892	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_G0000145;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG04160_ch_T0000426;Name=UTY
HG04160_chrY	CAT	exon	14145354	14145372	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14145373	14146204	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14146205	14146296	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14146297	14149104	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14149105	14149219	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14149220	14151626	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14151627	14151775	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14151776	14152265	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14152266	14152478	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14152479	14169782	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14169783	14169988	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14169989	14170828	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14170829	14170934	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14170935	14172448	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14172449	14172578	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14172579	14181790	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14181791	14182563	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14182564	14201230	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14201231	14201626	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14201627	14202150	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14202151	14202246	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14202247	14204104	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204105	14204197	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204198	14204691	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14204692	14204847	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14204848	14205315	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205316	14205450	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14205451	14205994	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14205995	14206214	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206215	14206657	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14206658	14206756	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14206757	14212494	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14212495	14212621	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14212622	14215483	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14215484	14215577	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14215578	14240090	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14240091	14240125	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14240126	14243149	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14243150	14243204	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14243205	14257224	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14257225	14257345	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14257346	14260966	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14260967	14261025	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14261026	14295238	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14295239	14295288	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14295289	14316342	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14316343	14316451	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14316452	14325475	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325476	14325539	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14325540	14325735	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG04160_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14325736	14326892	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG04160_ch_T0000426;gene_id=HG04160_ch_G0000145;Parent=HG04160_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG04160_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	14325399	14325436	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG04160_ch_G0000146;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG04160_ch_G0000146;Name=MIR12120
HG04160_chrY	CAT	transcript	14325399	14325488	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG04160_ch_T0000427;gene_id=HG04160_ch_G0000146;Parent=HG04160_ch_G0000146;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG04160_ch_T0000427;Name=MIR12120
HG04160_chrY	CAT	exon	14325399	14325488	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG04160_ch_T0000427;gene_id=HG04160_ch_G0000146;Parent=HG04160_ch_T0000427;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG04160_ch_T0000427:0;Name=MIR12120;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	14325411	14325436	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG04160_ch_T0000428;gene_id=HG04160_ch_G0000146;Parent=HG04160_ch_G0000146;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG04160_ch_T0000428;Name=MIR12120
HG04160_chrY	CAT	exon	14325411	14325436	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG04160_ch_T0000428;gene_id=HG04160_ch_G0000146;Parent=HG04160_ch_T0000428;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG04160_ch_T0000428:0;Name=MIR12120;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	14550102	14552227	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG04160_ch_G0000147;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG04160_ch_G0000147;Name=TMSB4Y
HG04160_chrY	CAT	transcript	14550102	14552227	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_G0000147;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG04160_ch_T0000429;Name=TMSB4Y
HG04160_chrY	CAT	exon	14550102	14550638	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG04160_ch_T0000429:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14550539	14550638	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG04160_ch_T0000429:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	14550539	14550541	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG04160_ch_T0000429;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14550639	14551427	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG04160_ch_T0000429:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14551428	14552227	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG04160_ch_T0000429:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14551428	14551462	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG04160_ch_T0000429:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	14551460	14551462	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG04160_ch_T0000429;gene_id=HG04160_ch_G0000147;Parent=HG04160_ch_T0000429;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG04160_ch_T0000429;Name=TMSB4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	14831988	14832689	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1;gene_id=HG04160_ch_G0000148;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000148;Name=VCY
HG04160_chrY	CAT	transcript	14831988	14832689	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_G0000148;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG04160_ch_T0000430;Name=VCY
HG04160_chrY	CAT	exon	14831988	14832362	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG04160_ch_T0000430:0;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14832087	14832362	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG04160_ch_T0000430:0;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	14832087	14832089	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG04160_ch_T0000430;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14832363	14832554	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG04160_ch_T0000430:0;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14832555	14832689	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG04160_ch_T0000430:1;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14832555	14832656	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG04160_ch_T0000430:1;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	14832654	14832656	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000430;gene_id=HG04160_ch_G0000148;Parent=HG04160_ch_T0000430;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG04160_ch_T0000430;Name=VCY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	14902452	14903183	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1;gene_id=HG04160_ch_G0000149;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000149;Name=VCY1B
HG04160_chrY	CAT	transcript	14902452	14903183	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_G0000149;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG04160_ch_T0000431;Name=VCY1B
HG04160_chrY	CAT	exon	14902452	14902616	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG04160_ch_T0000431:0;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14902515	14902616	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG04160_ch_T0000431:0;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	14902515	14902517	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG04160_ch_T0000431;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	14902617	14902808	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG04160_ch_T0000431:0;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	14902809	14903183	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG04160_ch_T0000431:1;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	14902809	14903084	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG04160_ch_T0000431:1;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	14903082	14903084	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000431;gene_id=HG04160_ch_G0000149;Parent=HG04160_ch_T0000431;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG04160_ch_T0000431;Name=VCY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	15368910	15691951	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG04160_ch_G0000150;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000150;Name=NLGN4Y
HG04160_chrY	CAT	transcript	15368910	15579863	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000432;Name=NLGN4Y
HG04160_chrY	CAT	exon	15368910	15369235	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000432:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15369236	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000432:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000432:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000432:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000432;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000432:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000432:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000432:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000432:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000432:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000432:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15579765	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000432:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15579766	15579863	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000432:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15579766	15579851	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000432:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15579849	15579851	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000432;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000432;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000432;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15368910	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000433;Name=NLGN4Y
HG04160_chrY	CAT	exon	15368910	15369235	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15369236	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000433:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000433:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569463	15569583	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000433:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15569463	15569465	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000433;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000433:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000433:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000433:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000433:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000433:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000433:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000433:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000433;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000433;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000433;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15368910	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000434;Name=NLGN4Y
HG04160_chrY	CAT	exon	15368910	15369235	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15369236	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000434;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000434:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000434:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000434:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000434;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000434;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000434;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15368910	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000435;Name=NLGN4Y
HG04160_chrY	CAT	exon	15368910	15369235	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15369236	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000435:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000435:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000435;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000435:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000435:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000435:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000435:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000435:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000435:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000435:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000435:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000435:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000435;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000435;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000435;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15368910	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000436;Name=NLGN4Y
HG04160_chrY	CAT	exon	15368910	15369866	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15369867	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000436;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000436:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000436:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000436:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000436;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000436;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000436;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370040	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000437;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370040	15370192	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15370193	15468325	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468326	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000437:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000437;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000437:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000437:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000437:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000437:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000437:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000437;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000437;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000437;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370266	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000438;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370266	15370578	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15370579	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000438;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000438:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000438:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000438:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000438;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000438;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000438;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370266	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000439;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370266	15370578	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15370579	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000439:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000439;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000439:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000439:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000439:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000439:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000439:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000439;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000439;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000439;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15579863	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000440;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000440:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000440;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000440:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000440:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15579765	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15579766	15579863	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000440:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15579766	15579851	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000440:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15579849	15579851	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000440;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000440;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000440;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000441;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000441;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000441:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000441:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000441:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000441;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000441;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000441;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000442;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371002	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371003	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000442;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000442:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000442:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000442:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000442;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000442;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000442;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000443;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15430478	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15430479	15430580	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15430581	15433914	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15433915	15434019	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15434020	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000443:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000443;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000443:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000443:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000443:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000443:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000443:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000443:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000443;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000443;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000443;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000444;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371002	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371003	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000444:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000444:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000444;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000444:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000444:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000444:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000444:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000444:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000444:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000444:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000444:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000444:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000444;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000444;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000444;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000445;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15370851	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15370852	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000445:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000445:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000445;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000445:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000445:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000445:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000445:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000445:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000445:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000445:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000445:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000445:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000445;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000445;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000445;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000446;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000446:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000446:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000446;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000446:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000446:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000446:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000446:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000446:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000446:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000446:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000446:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000446:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000446;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000446;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000446;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000447;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15406885	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15406886	15406965	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15406966	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000447;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000447:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000447:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000447:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000447;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000447;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000447;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000448;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15370851	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15370852	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000448;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000448:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000448:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000448:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000448;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000448;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000448;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000449;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371230	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371231	15406885	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15406886	15406965	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15406966	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000449:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000449;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000449:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000449:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000449:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000449:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000449:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000449:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000449;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000449;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000449;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15370823	15579863	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000450;Name=NLGN4Y
HG04160_chrY	CAT	exon	15370823	15371002	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000450:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15371003	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000450:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000450:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000450:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000450;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000450:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000450:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000450:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000450:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000450:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000450:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15579765	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000450:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15579766	15579863	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000450:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15579766	15579851	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000450:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15579849	15579851	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000450;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000450;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000450;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15400028	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000451;Name=NLGN4Y
HG04160_chrY	CAT	exon	15400028	15406965	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15406966	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000451;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000451:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000451:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000451:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000451;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000451;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000451;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15428894	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000452;Name=NLGN4Y
HG04160_chrY	CAT	exon	15428894	15430596	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15430597	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000452;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000452:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000452:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000452:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000452;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000452;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000452;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15428894	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000453;Name=NLGN4Y
HG04160_chrY	CAT	exon	15428894	15430596	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15430597	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000453:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000453;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000453:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000453:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000453:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000453:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000453:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000453:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000453;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000453;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000453;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15433915	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000454;Name=NLGN4Y
HG04160_chrY	CAT	exon	15433915	15434019	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15434020	15468313	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000454;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000454:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000454:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000454:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000454;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000454;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000454;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15468314	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000455;Name=NLGN4Y
HG04160_chrY	CAT	exon	15468314	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15547345	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15547346	15547439	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15547403	15547439	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15547403	15547405	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000455;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15547440	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000455:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000455:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000455;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000455;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000455;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15468326	15579863	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000456;Name=NLGN4Y
HG04160_chrY	CAT	exon	15468326	15468896	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15468425	15468896	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15468425	15468427	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000456;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15468897	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000456:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15565774	15565833	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000456:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569431	15569583	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15579765	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000456:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15579766	15579863	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000456:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15579766	15579851	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000456:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15579849	15579851	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000456;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000456;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000456;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	15551094	15691951	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_G0000150;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG04160_ch_T0000457;Name=NLGN4Y
HG04160_chrY	CAT	exon	15551094	15551114	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15551115	15565773	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15565774	15565833	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15565834	15569430	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15569431	15569583	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15569463	15569583	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000457:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	15569463	15569465	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG04160_ch_T0000457;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15569584	15670484	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15670485	15670670	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15670485	15670670	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000457:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15670671	15676026	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15676027	15676816	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15676027	15676816	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000457:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15676817	15686709	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG04160_ch_T0000457:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15686710	15691951	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG04160_ch_T0000457:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	15686710	15687559	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG04160_ch_T0000457:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	15687557	15687559	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000457;gene_id=HG04160_ch_G0000150;Parent=HG04160_ch_T0000457;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG04160_ch_T0000457;Name=NLGN4Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	15639942	15650330	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG04160_ch_G0000151;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG04160_ch_G0000151;Name=NLGN4Y-AS1
HG04160_chrY	CAT	transcript	15639942	15650330	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_G0000151;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG04160_ch_T0000458;Name=NLGN4Y-AS1
HG04160_chrY	CAT	exon	15639942	15640287	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG04160_ch_T0000458:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15640288	15644922	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG04160_ch_T0000458:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15644923	15645010	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG04160_ch_T0000458:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15645011	15647576	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG04160_ch_T0000458:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15647577	15647645	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG04160_ch_T0000458:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	15647646	15650301	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG04160_ch_T0000458:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	15650302	15650330	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG04160_ch_T0000458;gene_id=HG04160_ch_G0000151;Parent=HG04160_ch_T0000458;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG04160_ch_T0000458:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	16093401	16211422	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG04160_ch_G0000152;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG04160_ch_G0000152;Name=LOC107987355
HG04160_chrY	CAT	transcript	16093401	16211422	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_G0000152;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG04160_ch_T0000459;Name=LOC107987355
HG04160_chrY	CAT	exon	16093401	16093473	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_T0000459;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG04160_ch_T0000459:0;Name=LOC107987355;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	16093474	16194957	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_T0000459;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG04160_ch_T0000459:0;Name=LOC107987355;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	16194958	16195180	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_T0000459;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG04160_ch_T0000459:1;Name=LOC107987355;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	16195181	16211336	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_T0000459;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG04160_ch_T0000459:1;Name=LOC107987355;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	16211337	16211422	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG04160_ch_T0000459;gene_id=HG04160_ch_G0000152;Parent=HG04160_ch_T0000459;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG04160_ch_T0000459:2;Name=LOC107987355;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	16984560	16984691	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG04160_ch_G0000153;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG04160_ch_G0000153;Name=LOC124900508
HG04160_chrY	CAT	transcript	16984560	16984691	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG04160_ch_T0000460;gene_id=HG04160_ch_G0000153;Parent=HG04160_ch_G0000153;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG04160_ch_T0000460;Name=LOC124900508
HG04160_chrY	CAT	exon	16984560	16984691	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG04160_ch_T0000460;gene_id=HG04160_ch_G0000153;Parent=HG04160_ch_T0000460;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG04160_ch_T0000460:0;Name=LOC124900508;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18347152	18362930	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1;gene_id=HG04160_ch_G0000154;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG04160_ch_G0000154;Name=FAM41AY2
HG04160_chrY	CAT	transcript	18347152	18362930	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_G0000154;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG04160_ch_T0000461;Name=FAM41AY2
HG04160_chrY	CAT	exon	18347152	18347309	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18347310	18347904	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18347905	18347954	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18347955	18359285	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18359286	18359414	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18359415	18359661	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18359662	18359755	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18359756	18360348	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18360349	18360519	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18360520	18360628	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18360629	18360722	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18360723	18360996	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18360997	18361206	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18361207	18361499	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18361500	18361687	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18361688	18361899	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18361900	18362121	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18362122	18362203	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG04160_ch_T0000461:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18362204	18362930	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1;transcript_id=HG04160_ch_T0000461;gene_id=HG04160_ch_G0000154;Parent=HG04160_ch_T0000461;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG04160_ch_T0000461:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18400334	18409596	.	-	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;alternative_source_transcripts=hg002_chrY_paternal_346.1;gene_id=HG04160_ch_G0000155;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG04160_ch_G0000155;Name=LOC105377217
HG04160_chrY	CAT	transcript	18400334	18409596	1000	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_G0000155;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG04160_ch_T0000462;Name=LOC105377217
HG04160_chrY	CAT	exon	18400334	18402200	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_T0000462;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG04160_ch_T0000462:0;Name=LOC105377217;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18402201	18402910	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_T0000462;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG04160_ch_T0000462:0;Name=LOC105377217;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18402911	18403039	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_T0000462;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG04160_ch_T0000462:1;Name=LOC105377217;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18403040	18404254	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_T0000462;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG04160_ch_T0000462:1;Name=LOC105377217;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18404255	18409596	.	-	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;alternative_source_transcripts=hg002_chrY_paternal_346.1;transcript_id=HG04160_ch_T0000462;gene_id=HG04160_ch_G0000155;Parent=HG04160_ch_T0000462;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG04160_ch_T0000462:2;Name=LOC105377217;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18421381	18425670	.	-	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;alternative_source_transcripts=hg002_chrY_paternal_349.1;gene_id=HG04160_ch_G0000156;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG04160_ch_G0000156;Name=FAM224A
HG04160_chrY	CAT	transcript	18421381	18425670	1000	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_G0000156;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG04160_ch_T0000463;Name=FAM224A
HG04160_chrY	CAT	exon	18421381	18421564	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_T0000463;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG04160_ch_T0000463:0;Name=FAM224A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18421565	18422899	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_T0000463;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG04160_ch_T0000463:0;Name=FAM224A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18422900	18423017	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_T0000463;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG04160_ch_T0000463:1;Name=FAM224A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18423018	18425512	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_T0000463;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG04160_ch_T0000463:1;Name=FAM224A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18425513	18425670	.	-	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=hg002_chrY_paternal_349.1;transcript_id=HG04160_ch_T0000463;gene_id=HG04160_ch_G0000156;Parent=HG04160_ch_T0000463;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG04160_ch_T0000463:2;Name=FAM224A;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18534682	18535482	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1;gene_id=HG04160_ch_G0000157;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG04160_ch_G0000157;Name=LOC105377219
HG04160_chrY	CAT	transcript	18534682	18535482	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_G0000157;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG04160_ch_T0000464;Name=LOC105377219
HG04160_chrY	CAT	exon	18534682	18535138	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_T0000464;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG04160_ch_T0000464:0;Name=LOC105377219;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18535139	18535226	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_T0000464;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG04160_ch_T0000464:0;Name=LOC105377219;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18535227	18535312	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_T0000464;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG04160_ch_T0000464:1;Name=LOC105377219;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18535313	18535399	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_T0000464;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG04160_ch_T0000464:1;Name=LOC105377219;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18535400	18535482	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1;transcript_id=HG04160_ch_T0000464;gene_id=HG04160_ch_G0000157;Parent=HG04160_ch_T0000464;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG04160_ch_T0000464:2;Name=LOC105377219;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18539101	18545961	.	-	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;gene_id=HG04160_ch_G0000158;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff;ID=HG04160_ch_G0000158;Name=LOC124905302
HG04160_chrY	CAT	transcript	18539101	18545961	1000	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_G0000158;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG04160_ch_T0000465;Name=LOC124905302
HG04160_chrY	CAT	exon	18539101	18543045	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_T0000465;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG04160_ch_T0000465:0;Name=LOC124905302;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18543046	18543133	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_T0000465;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG04160_ch_T0000465:0;Name=LOC124905302;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18543134	18543882	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_T0000465;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG04160_ch_T0000465:1;Name=LOC124905302;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	18543883	18543969	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_T0000465;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG04160_ch_T0000465:1;Name=LOC124905302;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	18543970	18545961	.	-	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;transcript_id=HG04160_ch_T0000465;gene_id=HG04160_ch_G0000158;Parent=HG04160_ch_T0000465;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG04160_ch_T0000465:2;Name=LOC124905302;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18615149	18616729	.	-	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_358.1;gene_id=HG04160_ch_G0000159;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG04160_ch_G0000159;Name=XKRY
HG04160_chrY	CAT	transcript	18615149	18616729	1000	-	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG04160_ch_T0000466;gene_id=HG04160_ch_G0000159;Parent=HG04160_ch_G0000159;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=HG04160_ch_T0000466;Name=XKRY
HG04160_chrY	CAT	exon	18615149	18616729	.	-	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_358.1;transcript_id=HG04160_ch_T0000466;gene_id=HG04160_ch_G0000159;Parent=HG04160_ch_T0000466;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:HG04160_ch_T0000466:0;Name=XKRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18724435	18726394	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;gene_id=HG04160_ch_G0000160;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000160;Name=CDY2A
HG04160_chrY	CAT	transcript	18724435	18726394	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000467;gene_id=HG04160_ch_G0000160;Parent=HG04160_ch_G0000160;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG04160_ch_T0000467;Name=CDY2A
HG04160_chrY	CAT	exon	18724435	18726394	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000467;gene_id=HG04160_ch_G0000160;Parent=HG04160_ch_T0000467;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG04160_ch_T0000467:0;Name=CDY2A;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	18724441	18726066	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000467;gene_id=HG04160_ch_G0000160;Parent=HG04160_ch_T0000467;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG04160_ch_T0000467:0;Name=CDY2A;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	18724441	18724443	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000467;gene_id=HG04160_ch_G0000160;Parent=HG04160_ch_T0000467;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG04160_ch_T0000467;Name=CDY2A;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	18726064	18726066	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000467;gene_id=HG04160_ch_G0000160;Parent=HG04160_ch_T0000467;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG04160_ch_T0000467;Name=CDY2A;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18871957	18873917	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;gene_id=HG04160_ch_G0000161;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000161;Name=CDY2B
HG04160_chrY	CAT	transcript	18871957	18873917	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000468;gene_id=HG04160_ch_G0000161;Parent=HG04160_ch_G0000161;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG04160_ch_T0000468;Name=CDY2B
HG04160_chrY	CAT	exon	18871957	18873917	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000468;gene_id=HG04160_ch_G0000161;Parent=HG04160_ch_T0000468;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG04160_ch_T0000468:0;Name=CDY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	18872285	18873910	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000468;gene_id=HG04160_ch_G0000161;Parent=HG04160_ch_T0000468;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG04160_ch_T0000468:0;Name=CDY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	18872285	18872287	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000468;gene_id=HG04160_ch_G0000161;Parent=HG04160_ch_T0000468;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG04160_ch_T0000468;Name=CDY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	18873908	18873910	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000468;gene_id=HG04160_ch_G0000161;Parent=HG04160_ch_T0000468;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG04160_ch_T0000468;Name=CDY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	18981613	18983193	.	+	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_380.1;gene_id=HG04160_ch_G0000162;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG04160_ch_G0000162;Name=XKRY2
HG04160_chrY	CAT	transcript	18981613	18983193	1000	+	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_380.1;transcript_id=HG04160_ch_T0000469;gene_id=HG04160_ch_G0000162;Parent=HG04160_ch_G0000162;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG04160_ch_T0000469;Name=XKRY2
HG04160_chrY	CAT	exon	18981613	18983193	.	+	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_380.1;transcript_id=HG04160_ch_T0000469;gene_id=HG04160_ch_G0000162;Parent=HG04160_ch_T0000469;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG04160_ch_T0000469:0;Name=XKRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19052373	19059233	.	+	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_385.1;gene_id=HG04160_ch_G0000163;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff;ID=HG04160_ch_G0000163;Name=LOC124905303
HG04160_chrY	CAT	transcript	19052373	19059233	1000	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_G0000163;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG04160_ch_T0000470;Name=LOC124905303
HG04160_chrY	CAT	exon	19052373	19054364	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_T0000470;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG04160_ch_T0000470:0;Name=LOC124905303;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19054365	19054451	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_T0000470;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG04160_ch_T0000470:0;Name=LOC124905303;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19054452	19055200	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_T0000470;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG04160_ch_T0000470:1;Name=LOC124905303;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19055201	19055288	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_T0000470;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG04160_ch_T0000470:1;Name=LOC124905303;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19055289	19059233	.	+	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_385.1;transcript_id=HG04160_ch_T0000470;gene_id=HG04160_ch_G0000163;Parent=HG04160_ch_T0000470;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG04160_ch_T0000470:2;Name=LOC124905303;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19062851	19063651	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1;gene_id=HG04160_ch_G0000164;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG04160_ch_G0000164;Name=LOC105377218
HG04160_chrY	CAT	transcript	19062851	19063651	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_G0000164;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG04160_ch_T0000471;Name=LOC105377218
HG04160_chrY	CAT	exon	19062851	19062933	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_T0000471;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG04160_ch_T0000471:0;Name=LOC105377218;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19062934	19063020	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_T0000471;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG04160_ch_T0000471:0;Name=LOC105377218;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19063021	19063106	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_T0000471;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG04160_ch_T0000471:1;Name=LOC105377218;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19063107	19063194	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_T0000471;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG04160_ch_T0000471:1;Name=LOC105377218;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19063195	19063651	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1;transcript_id=HG04160_ch_T0000471;gene_id=HG04160_ch_G0000164;Parent=HG04160_ch_T0000471;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG04160_ch_T0000471:2;Name=LOC105377218;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19172712	19177003	.	+	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;alternative_source_transcripts=hg002_chrY_paternal_389.1;gene_id=HG04160_ch_G0000165;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG04160_ch_G0000165;Name=FAM224B
HG04160_chrY	CAT	transcript	19172712	19177003	1000	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_G0000165;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG04160_ch_T0000472;Name=FAM224B
HG04160_chrY	CAT	exon	19172712	19172848	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_T0000472;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG04160_ch_T0000472:0;Name=FAM224B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19172849	19175343	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_T0000472;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG04160_ch_T0000472:0;Name=FAM224B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19175344	19175461	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_T0000472;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG04160_ch_T0000472:1;Name=FAM224B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19175462	19176796	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_T0000472;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG04160_ch_T0000472:1;Name=FAM224B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19176797	19177003	.	+	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=hg002_chrY_paternal_389.1;transcript_id=HG04160_ch_T0000472;gene_id=HG04160_ch_G0000165;Parent=HG04160_ch_T0000472;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG04160_ch_T0000472:2;Name=FAM224B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19193332	19198027	.	+	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;alternative_source_transcripts=hg002_chrY_paternal_391.1;gene_id=HG04160_ch_G0000166;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG04160_ch_G0000166;Name=LOC105377220
HG04160_chrY	CAT	transcript	19193332	19198027	1000	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_G0000166;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG04160_ch_T0000473;Name=LOC105377220
HG04160_chrY	CAT	exon	19193332	19194106	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_T0000473;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG04160_ch_T0000473:0;Name=LOC105377220;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19194107	19195321	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_T0000473;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG04160_ch_T0000473:0;Name=LOC105377220;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19195322	19195450	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_T0000473;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG04160_ch_T0000473:1;Name=LOC105377220;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19195451	19196160	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_T0000473;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG04160_ch_T0000473:1;Name=LOC105377220;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19196161	19198027	.	+	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;alternative_source_transcripts=hg002_chrY_paternal_391.1;transcript_id=HG04160_ch_T0000473;gene_id=HG04160_ch_G0000166;Parent=HG04160_ch_T0000473;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG04160_ch_T0000473:2;Name=LOC105377220;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19235431	19251207	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1;gene_id=HG04160_ch_G0000167;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG04160_ch_G0000167;Name=FAM41AY1
HG04160_chrY	CAT	transcript	19235431	19251207	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_G0000167;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG04160_ch_T0000474;Name=FAM41AY1
HG04160_chrY	CAT	exon	19235431	19236157	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19236158	19236239	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19236240	19236461	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19236462	19236673	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19236674	19236861	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19236862	19237154	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19237155	19237364	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19237365	19237638	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19237639	19237732	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19237733	19237841	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19237842	19238012	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19238013	19238605	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19238606	19238699	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19238700	19238946	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19238947	19239075	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19239076	19250404	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19250405	19250454	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19250455	19251049	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG04160_ch_T0000474:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19251050	19251207	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1;transcript_id=HG04160_ch_T0000474;gene_id=HG04160_ch_G0000167;Parent=HG04160_ch_T0000474;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG04160_ch_T0000474:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19330163	19337981	.	+	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG04160_ch_G0000168;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=transMap_pairwise;ID=HG04160_ch_G0000168;Name=LOC124905305
HG04160_chrY	CAT	transcript	19330163	19337981	1000	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_G0000168;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG04160_ch_T0000475;Name=LOC124905305
HG04160_chrY	CAT	exon	19330163	19330241	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000475:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19330242	19332642	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000475:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19332643	19332805	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000475:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19332806	19333458	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000475:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19333459	19333560	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000475:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19333561	19335928	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000475:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19335929	19336133	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000475:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19336134	19337845	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000475:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19337846	19337981	.	+	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000475;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000475;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000475:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19330165	19337981	1000	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_G0000168;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG04160_ch_T0000476;Name=LOC124905305
HG04160_chrY	CAT	exon	19330165	19330241	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000476:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19330242	19332642	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000476:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19332643	19332805	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000476:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19332806	19333458	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000476:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19333459	19333560	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000476:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19333561	19335928	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000476:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19335929	19336133	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000476:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19336134	19337845	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000476:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19337846	19337981	.	+	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000476;gene_id=HG04160_ch_G0000168;Parent=HG04160_ch_T0000476;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000476:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19332671	19332832	.	+	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG04160_ch_G0000169;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG04160_ch_G0000169;Name=LOC124905307
HG04160_chrY	CAT	transcript	19332671	19332832	1000	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG04160_ch_T0000477;gene_id=HG04160_ch_G0000169;Parent=HG04160_ch_G0000169;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG04160_ch_T0000477;Name=LOC124905307
HG04160_chrY	CAT	exon	19332671	19332832	.	+	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG04160_ch_T0000477;gene_id=HG04160_ch_G0000169;Parent=HG04160_ch_T0000477;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG04160_ch_T0000477:0;Name=LOC124905307;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19362486	19567527	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG04160_ch_G0000170;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG04160_ch_G0000170;Name=TTTY14
HG04160_chrY	CAT	transcript	19362486	19565983	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000478;Name=TTTY14
HG04160_chrY	CAT	exon	19362486	19362819	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000478:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19362820	19367052	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000478:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19367053	19367190	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000478:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19367191	19402353	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000478:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19402354	19402468	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000478:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19402469	19558703	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000478:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19558704	19558778	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000478:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19558779	19565920	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000478:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19565921	19565983	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG04160_ch_T0000478;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000478;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000478:4;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19362486	19566009	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000479;Name=TTTY14
HG04160_chrY	CAT	exon	19362486	19362819	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000479:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19362820	19367052	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000479:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19367053	19367190	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000479:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19367191	19563478	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000479:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19563479	19563541	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000479:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19563542	19565920	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000479:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19565921	19566009	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG04160_ch_T0000479;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000479;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000479:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19362486	19567527	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000480;Name=TTTY14
HG04160_chrY	CAT	exon	19362486	19362819	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000480:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19362820	19422726	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000480:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19422727	19422825	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000480:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19422826	19423340	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000480:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19423341	19423459	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000480:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19423460	19558703	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000480:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19558704	19558778	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000480:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19558779	19567024	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000480:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19567025	19567527	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG04160_ch_T0000480;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000480;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000480:4;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19362486	19567527	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000481;Name=TTTY14
HG04160_chrY	CAT	exon	19362486	19362819	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000481:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19362820	19367052	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000481:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19367053	19367190	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000481:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19367191	19558703	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000481:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19558704	19558778	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000481:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19558779	19567024	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000481:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19567025	19567527	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG04160_ch_T0000481;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000481;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000481:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19362486	19567527	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000482;Name=TTTY14
HG04160_chrY	CAT	exon	19362486	19362819	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000482:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19362820	19367052	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000482:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19367053	19367190	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000482:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19367191	19567024	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000482:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19567025	19567527	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG04160_ch_T0000482;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000482;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000482:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19421991	19566009	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000483;Name=TTTY14
HG04160_chrY	CAT	exon	19421991	19422825	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000483:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19422826	19534526	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000483:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19534527	19534680	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000483:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19534681	19535226	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000483:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19535227	19535276	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000483:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19535277	19558703	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000483:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19558704	19558778	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000483:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19558779	19565920	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000483:3;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19565921	19566009	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG04160_ch_T0000483;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000483;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000483:4;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19422435	19565983	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000484;Name=TTTY14
HG04160_chrY	CAT	exon	19422435	19422825	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000484;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000484:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19422826	19558703	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000484;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000484:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19558704	19558778	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000484;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000484:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19558779	19565920	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000484;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000484:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19565921	19565983	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG04160_ch_T0000484;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000484;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000484:2;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19422435	19567527	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG04160_ch_T0000485;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_G0000170;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG04160_ch_T0000485;Name=TTTY14
HG04160_chrY	CAT	exon	19422435	19422825	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG04160_ch_T0000485;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000485;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000485:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19422826	19567024	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG04160_ch_T0000485;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000485;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG04160_ch_T0000485:0;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19567025	19567527	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG04160_ch_T0000485;gene_id=HG04160_ch_G0000170;Parent=HG04160_ch_T0000485;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG04160_ch_T0000485:1;Name=TTTY14;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19569836	19578858	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG04160_ch_G0000171;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG04160_ch_G0000171;Name=LOC124905306
HG04160_chrY	CAT	transcript	19569836	19578858	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG04160_ch_T0000486;gene_id=HG04160_ch_G0000171;Parent=HG04160_ch_G0000171;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG04160_ch_T0000486;Name=LOC124905306
HG04160_chrY	CAT	exon	19569836	19570705	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG04160_ch_T0000486;gene_id=HG04160_ch_G0000171;Parent=HG04160_ch_T0000486;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG04160_ch_T0000486:0;Name=LOC124905306;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19570706	19576479	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG04160_ch_T0000486;gene_id=HG04160_ch_G0000171;Parent=HG04160_ch_T0000486;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG04160_ch_T0000486:0;Name=LOC124905306;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19576480	19578858	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG04160_ch_T0000486;gene_id=HG04160_ch_G0000171;Parent=HG04160_ch_T0000486;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG04160_ch_T0000486:1;Name=LOC124905306;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19945455	19993175	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG04160_ch_G0000172;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG04160_ch_G0000172;Name=BCORP1
HG04160_chrY	CAT	transcript	19945455	19993175	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_G0000172;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG04160_ch_T0000487;Name=BCORP1
HG04160_chrY	CAT	exon	19945455	19946888	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:0;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19946889	19948942	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:0;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19948943	19949098	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:1;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19949099	19949307	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:1;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19949308	19949385	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:2;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19949386	19955123	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:2;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19955124	19955245	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:3;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19955246	19956473	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:3;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19956474	19957392	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:4;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19957393	19963922	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:4;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19963923	19964162	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:5;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19964163	19964657	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:5;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19964658	19964921	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:6;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19964922	19970186	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:6;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19970187	19970312	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:7;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19970313	19993053	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000487:7;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19993054	19993175	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG04160_ch_T0000487;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000487;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000487:8;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	19945455	19993175	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_G0000172;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG04160_ch_T0000488;Name=BCORP1
HG04160_chrY	CAT	exon	19945455	19946888	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:0;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19946889	19947080	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:0;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19947081	19947141	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:1;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19947142	19948942	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:1;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19948943	19949098	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:2;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19949099	19949307	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:2;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19949308	19949385	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:3;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19949386	19949977	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:3;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19949978	19950123	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:4;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19950124	19955123	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:4;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19955124	19955245	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:5;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19955246	19956473	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:5;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19956474	19957392	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:6;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19957393	19963922	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:6;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19963923	19964162	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:7;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19964163	19964657	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:7;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19964658	19964921	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:8;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19964922	19970186	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:8;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19970187	19970312	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:9;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19970313	19993053	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG04160_ch_T0000488:9;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19993054	19993175	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG04160_ch_T0000488;gene_id=HG04160_ch_G0000172;Parent=HG04160_ch_T0000488;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG04160_ch_T0000488:10;Name=BCORP1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	19971636	19973475	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG04160_ch_G0000173;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000173;Name=LOC102723934
HG04160_chrY	CAT	transcript	19971636	19973475	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_G0000173;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG04160_ch_T0000489;Name=LOC102723934
HG04160_chrY	CAT	exon	19971636	19972024	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG04160_ch_T0000489:0;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	19971636	19972024	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG04160_ch_T0000489:0;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	19971636	19971638	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG04160_ch_T0000489;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19972025	19972336	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG04160_ch_T0000489:0;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19972337	19972348	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG04160_ch_T0000489:1;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	19972337	19972348	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG04160_ch_T0000489:1;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	19972349	19972428	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG04160_ch_T0000489:1;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	19972429	19973475	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG04160_ch_T0000489:2;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	19972429	19973452	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG04160_ch_T0000489:2;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	19973450	19973452	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000489;gene_id=HG04160_ch_G0000173;Parent=HG04160_ch_T0000489;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG04160_ch_T0000489;Name=LOC102723934;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	20043907	20057017	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG04160_ch_G0000174;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG04160_ch_G0000174;Name=LOC105377223
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000490;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20046820	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000490:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20046821	20047237	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000490:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20047238	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000490:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048031	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000490:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048032	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000490:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20056989	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000490:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20056990	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG04160_ch_T0000490;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000490;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000490:3;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000491;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20046820	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000491:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20046821	20047237	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000491:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20047238	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000491:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048047	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000491:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048048	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000491:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20056989	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000491:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20056990	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG04160_ch_T0000491;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000491;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000491:3;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000492;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20046820	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000492:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20046821	20047237	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000492:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20047238	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000492:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048031	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000492:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048032	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000492:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20049347	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000492:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20049348	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG04160_ch_T0000492;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000492;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000492:3;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000493;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20045562	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000493:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20045563	20047237	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000493:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20047238	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000493:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048047	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000493:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048048	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000493:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20049347	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000493:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20049348	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG04160_ch_T0000493;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000493;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000493:3;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000494;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20045562	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000494:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20045563	20047237	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000494:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20047238	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000494:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048031	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000494:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048032	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000494:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20056989	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000494:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20056990	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG04160_ch_T0000494;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000494;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000494:3;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000495;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000495;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000495:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048031	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000495;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000495:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048032	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000495;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000495:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20049347	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000495;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000495:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20049348	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG04160_ch_T0000495;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000495;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000495:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20043907	20057017	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_G0000174;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG04160_ch_T0000496;Name=LOC105377223
HG04160_chrY	CAT	exon	20043907	20047297	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000496;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000496:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20047298	20048031	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000496;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000496:0;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20048032	20048148	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000496;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000496:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20048149	20056989	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000496;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG04160_ch_T0000496:1;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20056990	20057017	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG04160_ch_T0000496;gene_id=HG04160_ch_G0000174;Parent=HG04160_ch_T0000496;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG04160_ch_T0000496:2;Name=LOC105377223;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	20057366	20097186	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG04160_ch_G0000175;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG04160_ch_G0000175;Name=TXLNGY
HG04160_chrY	CAT	transcript	20057366	20080431	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_G0000175;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG04160_ch_T0000497;Name=TXLNGY
HG04160_chrY	CAT	exon	20057366	20057490	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000497:0;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20057491	20077217	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000497:0;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20077218	20077515	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000497:1;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20077516	20079528	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000497:1;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20079529	20079620	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000497:2;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20079621	20080090	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000497:2;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20080091	20080431	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG04160_ch_T0000497;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000497;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000497:3;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20057366	20097186	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_G0000175;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG04160_ch_T0000498;Name=TXLNGY
HG04160_chrY	CAT	exon	20057366	20057490	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:0;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20057491	20077217	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:0;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20077218	20077515	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:1;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20077516	20079528	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:1;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20079529	20079620	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:2;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20079621	20081787	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:2;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20081788	20081967	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:3;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20081968	20083406	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:3;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20083407	20083601	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:4;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20083602	20086022	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:4;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20086023	20086142	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:5;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20086143	20087600	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:5;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20087601	20087675	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:6;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20087676	20089748	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:6;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20089749	20089841	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:7;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20089842	20092225	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:7;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20092226	20092321	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:8;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20092322	20093806	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG04160_ch_T0000498:8;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20093807	20097186	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG04160_ch_T0000498;gene_id=HG04160_ch_G0000175;Parent=HG04160_ch_T0000498;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG04160_ch_T0000498:9;Name=TXLNGY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	20193880	20234741	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG04160_ch_G0000176;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000176;Name=KDM5D
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000499;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000499;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20213355	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20213356	20213448	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20213356	20213448	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20213449	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000499:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000499;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000499:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000499;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000499;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000499:27;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000500;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000500;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198336	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198337	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198337	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199593	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199593	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199594	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000500:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000500;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000500:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000500;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000500;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000500:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000501;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000501;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199593	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199593	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199594	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000501;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000501:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000501;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000501;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000501:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000502;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000502;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198336	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198337	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198337	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199593	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199593	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199594	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000502;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000502:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000502;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000502;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000502:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000503;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000503;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000503;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000503:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000503;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000503;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000503:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000504;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000504;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000504;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000504:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000504;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000504;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000504:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000505;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000505;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000505;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000505:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000505;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000505;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000505:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000506;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000506;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199593	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199593	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199594	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000506:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000506;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000506:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000506;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000506;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000506:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000507;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000507;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198336	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198337	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198337	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000507:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000507;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000507:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000507;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000507;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000507:26;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20193880	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000508;Name=KDM5D
HG04160_chrY	CAT	exon	20193880	20196360	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196010	20196360	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196010	20196012	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000508;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196361	20196455	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196456	20196655	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196456	20196655	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196656	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198336	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198337	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198337	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000508:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000508;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000508:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000508;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000508;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000508:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20196493	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000509;Name=KDM5D
HG04160_chrY	CAT	exon	20196493	20196623	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196595	20196623	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20196595	20196597	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000509;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196624	20196808	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20196809	20196878	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20196809	20196878	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20196879	20197161	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197162	20197761	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197162	20197761	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20197762	20197948	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20197949	20198086	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20197949	20198086	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198087	20198258	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198259	20198438	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198259	20198438	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20198439	20198889	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20198890	20199028	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20198890	20199028	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199029	20199465	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20199466	20199824	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20199466	20199824	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20199825	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:20;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:21;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:22;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:23;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000509:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000509;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000509:24;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000509;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000509;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000509:25;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20199475	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000510;Name=KDM5D
HG04160_chrY	CAT	exon	20199475	20200275	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200192	20200275	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20200192	20200194	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000510;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200276	20200390	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20200391	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20200391	20200487	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205366	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205367	20205514	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205367	20205514	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205515	20205629	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205630	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205630	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000510:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000510;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000510:18;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000510;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000510;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000510:19;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20200415	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000511;Name=KDM5D
HG04160_chrY	CAT	exon	20200415	20200487	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20200488	20205598	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205599	20205754	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205622	20205754	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20205622	20205624	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000511;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20205755	20205837	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20205838	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20205838	20206019	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000511:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000511;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000511:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000511;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000511;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000511:17;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20205886	20234741	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_G0000176;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG04160_ch_T0000512;Name=KDM5D
HG04160_chrY	CAT	exon	20205886	20206019	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206003	20206019	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	20206003	20206005	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG04160_ch_T0000512;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206020	20206113	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:0;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206114	20206126	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206114	20206126	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206127	20206293	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:1;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206294	20206488	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206294	20206488	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206489	20206610	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:2;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20206611	20206730	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20206611	20206730	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20206731	20210886	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:3;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20210887	20211049	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20210887	20211049	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211050	20211144	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:4;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20211145	20211326	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20211145	20211326	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20211327	20221786	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:5;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20221787	20221945	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20221787	20221945	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20221946	20222060	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:6;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222061	20222180	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222061	20222180	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222181	20222598	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:7;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20222599	20222757	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20222599	20222757	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20222758	20225366	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:8;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225367	20225512	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225367	20225512	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225513	20225635	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:9;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20225636	20225765	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20225636	20225765	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20225766	20229542	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:10;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20229543	20229677	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20229543	20229677	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20229678	20231332	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:11;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231333	20231503	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231333	20231503	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231504	20231749	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:12;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20231750	20231872	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20231750	20231872	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20231873	20233176	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:13;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20233177	20233254	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20233177	20233254	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20233255	20234399	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:14;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234400	20234568	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	20234400	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG04160_ch_T0000512:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	20234547	20234549	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG04160_ch_T0000512;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20234569	20234685	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG04160_ch_T0000512:15;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20234686	20234741	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000512;gene_id=HG04160_ch_G0000176;Parent=HG04160_ch_T0000512;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG04160_ch_T0000512:16;Name=KDM5D;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	20234771	20247464	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG04160_ch_G0000177;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG04160_ch_G0000177;Name=LOC105377224
HG04160_chrY	CAT	transcript	20234771	20247571	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_G0000177;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG04160_ch_T0000513;Name=LOC105377224
HG04160_chrY	CAT	exon	20234771	20235728	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000513:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20235729	20244640	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000513:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20244641	20244830	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000513:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20244831	20245219	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000513:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20245220	20247571	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG04160_ch_T0000513;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000513;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000513:2;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20234800	20249086	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_G0000177;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG04160_ch_T0000514;Name=LOC105377224
HG04160_chrY	CAT	exon	20234800	20235728	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000514;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000514:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20235729	20244741	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000514;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000514:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20244742	20244830	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000514;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000514:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20244831	20245219	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000514;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000514:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20245220	20249086	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG04160_ch_T0000514;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000514;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000514:2;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	20234853	20247464	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_G0000177;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG04160_ch_T0000515;Name=LOC105377224
HG04160_chrY	CAT	exon	20234853	20235728	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000515:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20235729	20244741	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000515:0;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20244742	20244830	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000515:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20244831	20245219	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000515:1;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20245220	20245339	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000515:2;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	20245340	20246657	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG04160_ch_T0000515:2;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	20246658	20247464	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG04160_ch_T0000515;gene_id=HG04160_ch_G0000177;Parent=HG04160_ch_T0000515;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG04160_ch_T0000515:3;Name=LOC105377224;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21071655	21125180	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG04160_ch_G0000178;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG04160_ch_G0000178;Name=TTTY10
HG04160_chrY	CAT	transcript	21071655	21125180	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_G0000178;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG04160_ch_T0000516;Name=TTTY10
HG04160_chrY	CAT	exon	21071655	21071809	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:0;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21071810	21072414	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG04160_ch_T0000516:0;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21072415	21072654	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:1;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21072655	21074175	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG04160_ch_T0000516:1;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21074176	21074235	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:2;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21074236	21075858	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG04160_ch_T0000516:2;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21075859	21075968	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:3;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21075969	21113303	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG04160_ch_T0000516:3;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21113304	21113408	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:4;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21113409	21124222	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG04160_ch_T0000516:4;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21124223	21125180	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG04160_ch_T0000516;gene_id=HG04160_ch_G0000178;Parent=HG04160_ch_T0000516;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG04160_ch_T0000516:5;Name=TTTY10;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21181696	21199075	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG04160_ch_G0000179;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000179;Name=EIF1AY
HG04160_chrY	CAT	transcript	21181696	21199075	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_G0000179;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG04160_ch_T0000517;Name=EIF1AY
HG04160_chrY	CAT	exon	21181696	21181807	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21181792	21181807	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	21181792	21181794	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG04160_ch_T0000517;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21181808	21185527	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000517:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21185528	21185611	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21185528	21185611	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21185612	21188509	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000517:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21188510	21188613	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21188510	21188613	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21188614	21193944	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000517:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21193945	21194026	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21193945	21194026	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21194027	21195404	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000517:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21195405	21195496	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21195405	21195496	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21195497	21198261	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000517:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21198262	21199075	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000517:5;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21198262	21198267	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000517:5;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	21198265	21198267	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000517;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000517;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG04160_ch_T0000517;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21181696	21199075	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_G0000179;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG04160_ch_T0000518;Name=EIF1AY
HG04160_chrY	CAT	exon	21181696	21181807	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21181792	21181807	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	21181792	21181794	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG04160_ch_T0000518;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21181808	21185527	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:0;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21185528	21185611	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21185528	21185611	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21185612	21188509	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:1;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21188510	21188613	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21188510	21188613	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21188614	21190394	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:2;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21190395	21190445	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21190395	21190445	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21190446	21193944	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:3;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21193945	21194026	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21193945	21194026	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21194027	21195404	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:4;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21195405	21195496	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:5;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21195405	21195496	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:5;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21195497	21198261	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG04160_ch_T0000518:5;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21198262	21199075	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG04160_ch_T0000518:6;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21198262	21198267	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG04160_ch_T0000518:6;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	21198265	21198267	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000518;gene_id=HG04160_ch_G0000179;Parent=HG04160_ch_T0000518;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG04160_ch_T0000518;Name=EIF1AY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21362042	21386966	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG04160_ch_G0000180;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000180;Name=RPS4Y2
HG04160_chrY	CAT	transcript	21362042	21386966	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_G0000180;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG04160_ch_T0000519;Name=RPS4Y2
HG04160_chrY	CAT	exon	21362042	21362100	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21362098	21362100	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	21362098	21362100	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG04160_ch_T0000519;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21362101	21362711	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21362712	21362789	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21362712	21362789	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21362790	21365801	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21365802	21365982	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21365802	21365982	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21365983	21367217	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21367218	21367315	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21367218	21367315	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21367316	21374738	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21374739	21374910	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21374739	21374910	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21374911	21385442	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21385443	21385600	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21385443	21385600	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21385601	21386864	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG04160_ch_T0000519:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21386865	21386966	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG04160_ch_T0000519:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	21386865	21386966	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG04160_ch_T0000519:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	21386964	21386966	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000519;gene_id=HG04160_ch_G0000180;Parent=HG04160_ch_T0000519;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG04160_ch_T0000519;Name=RPS4Y2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21744559	21778892	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG04160_ch_G0000181;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG04160_ch_G0000181;Name=LOC105377225
HG04160_chrY	CAT	transcript	21744559	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000520;Name=LOC105377225
HG04160_chrY	CAT	exon	21744559	21744794	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21744795	21754101	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000520:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754102	21754152	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754153	21754344	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000520:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754345	21754439	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754440	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000520:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000520:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000520:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG04160_ch_T0000520;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000520;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000520:5;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21744559	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000521;Name=LOC105377225
HG04160_chrY	CAT	exon	21744559	21744794	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000521:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21744795	21754344	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000521:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754345	21754439	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000521:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754440	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000521:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000521:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000521:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000521:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000521:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG04160_ch_T0000521;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000521;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000521:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21744559	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000522;Name=LOC105377225
HG04160_chrY	CAT	exon	21744559	21744794	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000522:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21744795	21754467	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000522:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754468	21754521	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000522:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754522	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000522:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000522:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000522:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000522:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000522:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG04160_ch_T0000522;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000522;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000522:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21744559	21778892	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000523;Name=LOC105377225
HG04160_chrY	CAT	exon	21744559	21744794	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21744795	21750705	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21750706	21750797	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21750798	21754101	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754102	21754152	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754153	21754344	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754345	21754439	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754440	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:5;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000523:5;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21778892	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG04160_ch_T0000523;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000523;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000523:6;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21749965	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000524;Name=LOC105377225
HG04160_chrY	CAT	exon	21749965	21754152	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000524:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754153	21754344	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000524:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754345	21754521	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000524:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754522	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000524:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000524:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000524:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000524:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000524:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG04160_ch_T0000524;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000524;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000524:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21749965	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000525;Name=LOC105377225
HG04160_chrY	CAT	exon	21749965	21754152	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000525:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754153	21754467	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000525:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754468	21754521	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000525:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754522	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000525:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000525:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758752	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000525:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758753	21758887	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000525:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758888	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000525:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG04160_ch_T0000525;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000525;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000525:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21749965	21776137	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_G0000181;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG04160_ch_T0000526;Name=LOC105377225
HG04160_chrY	CAT	exon	21749965	21754152	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000526:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754153	21754344	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000526:0;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21754345	21754521	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000526:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21754522	21757502	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000526:1;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21757503	21757556	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000526:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21757557	21758593	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000526:2;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21758594	21758685	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000526:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21758686	21775873	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG04160_ch_T0000526:3;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21775874	21776137	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG04160_ch_T0000526;gene_id=HG04160_ch_G0000181;Parent=HG04160_ch_T0000526;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG04160_ch_T0000526:4;Name=LOC105377225;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21834055	21859291	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG04160_ch_G0000182;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG04160_ch_G0000182;Name=LOC107987346
HG04160_chrY	CAT	transcript	21834055	21859291	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_G0000182;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG04160_ch_T0000527;Name=LOC107987346
HG04160_chrY	CAT	exon	21834055	21834092	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000527;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000527:0;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21834093	21834269	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000527;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG04160_ch_T0000527:0;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21834270	21834377	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000527;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000527:1;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21834378	21856466	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000527;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG04160_ch_T0000527:1;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21856467	21859291	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG04160_ch_T0000527;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000527;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000527:2;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	21834055	21859291	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_G0000182;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG04160_ch_T0000528;Name=LOC107987346
HG04160_chrY	CAT	exon	21834055	21834092	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000528:0;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21834093	21834269	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG04160_ch_T0000528:0;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21834270	21834377	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000528:1;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21834378	21856466	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG04160_ch_T0000528:1;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21856467	21856625	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000528:2;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21856626	21859039	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG04160_ch_T0000528:2;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21859040	21859291	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG04160_ch_T0000528;gene_id=HG04160_ch_G0000182;Parent=HG04160_ch_T0000528;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG04160_ch_T0000528:3;Name=LOC107987346;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21853982	21908923	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG04160_ch_G0000183;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG04160_ch_G0000183;Name=LOC107987347
HG04160_chrY	CAT	transcript	21853982	21908923	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_G0000183;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG04160_ch_T0000529;Name=LOC107987347
HG04160_chrY	CAT	exon	21853982	21855067	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_T0000529;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG04160_ch_T0000529:0;Name=LOC107987347;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21855068	21902067	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_T0000529;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG04160_ch_T0000529:0;Name=LOC107987347;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21902068	21902133	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_T0000529;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG04160_ch_T0000529:1;Name=LOC107987347;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21902134	21908473	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_T0000529;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG04160_ch_T0000529:1;Name=LOC107987347;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21908474	21908923	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG04160_ch_T0000529;gene_id=HG04160_ch_G0000183;Parent=HG04160_ch_T0000529;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG04160_ch_T0000529:2;Name=LOC107987347;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	21987821	22057762	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG04160_ch_G0000184;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG04160_ch_G0000184;Name=PRORY
HG04160_chrY	CAT	transcript	21987821	22057762	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_G0000184;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG04160_ch_T0000530;Name=PRORY
HG04160_chrY	CAT	exon	21987821	21989195	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG04160_ch_T0000530:0;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21989196	21989346	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG04160_ch_T0000530:0;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21989347	21989711	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG04160_ch_T0000530:1;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21989712	21989827	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG04160_ch_T0000530:1;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21989828	21989884	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG04160_ch_T0000530:2;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21989885	21992146	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG04160_ch_T0000530:2;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	21992147	21992271	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG04160_ch_T0000530:3;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	21992272	22057559	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG04160_ch_T0000530:3;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22057560	22057762	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG04160_ch_T0000530;gene_id=HG04160_ch_G0000184;Parent=HG04160_ch_T0000530;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG04160_ch_T0000530:4;Name=PRORY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22001063	22007477	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG04160_ch_G0000185;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG04160_ch_G0000185;Name=RBMY2EP
HG04160_chrY	CAT	transcript	22001063	22007477	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_G0000185;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG04160_ch_T0000531;Name=RBMY2EP
HG04160_chrY	CAT	exon	22001063	22001206	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG04160_ch_T0000531:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22001207	22001614	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG04160_ch_T0000531:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22001615	22001703	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG04160_ch_T0000531:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22001704	22001785	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG04160_ch_T0000531:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22001786	22001896	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG04160_ch_T0000531:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22001897	22006837	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG04160_ch_T0000531:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22006838	22006941	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG04160_ch_T0000531:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22006942	22007391	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG04160_ch_T0000531:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22007392	22007477	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG04160_ch_T0000531;gene_id=HG04160_ch_G0000185;Parent=HG04160_ch_T0000531;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG04160_ch_T0000531:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22117253	22131700	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG04160_ch_G0000186;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG04160_ch_G0000186;Name=RBMY1A1
HG04160_chrY	CAT	transcript	22117253	22131700	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_G0000186;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000532;Name=RBMY1A1
HG04160_chrY	CAT	exon	22117253	22117400	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22117401	22119261	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119262	22119374	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119266	22119374	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22119266	22119268	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000532;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119375	22119848	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119849	22119952	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119849	22119952	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119953	22122971	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22122972	22123149	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22122972	22123149	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22123150	22125064	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22125065	22125217	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22125065	22125217	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22125218	22127227	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22127228	22127342	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22127228	22127342	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22127343	22128297	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128298	22128408	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128298	22128408	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128409	22128849	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128850	22128960	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128850	22128960	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128961	22129394	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22129395	22129505	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22129395	22129505	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22129506	22130426	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130427	22130537	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130427	22130537	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130538	22130623	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130624	22130712	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130624	22130712	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130713	22131123	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000532:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22131124	22131700	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000532:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22131124	22131422	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000532:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22131420	22131422	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000532;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000532;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000532;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22117253	22130712	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_G0000186;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000533;Name=RBMY1A1
HG04160_chrY	CAT	exon	22117253	22117400	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22117401	22119261	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119262	22119374	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119266	22119374	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22119266	22119268	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000533;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119375	22119848	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119849	22119952	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119849	22119952	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119953	22122971	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22122972	22123149	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22122972	22123149	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22123150	22125064	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22125065	22125217	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22125065	22125217	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22125218	22127227	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22127228	22127342	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22127228	22127342	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22127343	22128297	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128298	22128408	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128298	22128408	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128409	22128849	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128850	22128960	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128850	22128960	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128961	22129394	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22129395	22129505	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22129395	22129505	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22129506	22130426	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130427	22130537	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130427	22130537	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130538	22130623	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130624	22130712	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000533:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130624	22130711	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000533:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22130709	22130711	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000533;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000533;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000533;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22117253	22131700	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_G0000186;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000534;Name=RBMY1A1
HG04160_chrY	CAT	exon	22117253	22117400	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22117401	22119261	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119262	22119374	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119375	22119848	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119849	22119952	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119953	22125064	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22125065	22125217	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22125094	22125217	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22125094	22125096	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000534;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22125218	22127227	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22127228	22127342	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22127228	22127342	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22127343	22128297	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128298	22128408	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128298	22128408	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128409	22128849	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128850	22128960	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128850	22128960	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128961	22129394	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22129395	22129505	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22129395	22129505	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22129506	22130426	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130427	22130537	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130427	22130537	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130538	22130623	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130624	22130712	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130624	22130712	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130713	22131123	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000534:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22131124	22131700	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000534:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22131124	22131422	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000534:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22131420	22131422	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000534;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000534;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000534;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22117253	22131700	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_G0000186;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000535;Name=RBMY1A1
HG04160_chrY	CAT	exon	22117253	22117400	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22117401	22119261	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119262	22119374	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119266	22119374	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22119266	22119268	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000535;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119375	22119848	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22119849	22119952	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22119849	22119952	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22119953	22122971	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22122972	22123149	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22122972	22123149	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22123150	22125064	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22125065	22125217	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22125065	22125217	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22125218	22127227	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22127228	22127342	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22127228	22127342	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22127343	22128297	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128298	22128408	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128298	22128408	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128409	22128849	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22128850	22128960	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22128850	22128960	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22128961	22129394	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22129395	22129505	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22129395	22129505	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22129506	22130623	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22130624	22130712	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22130624	22130712	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22130713	22131123	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000535:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22131124	22131700	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000535:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22131124	22131422	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000535:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22131420	22131422	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000535;gene_id=HG04160_ch_G0000186;Parent=HG04160_ch_T0000535;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000535;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22140792	22155242	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG04160_ch_G0000187;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG04160_ch_G0000187;Name=RBMY1A1
HG04160_chrY	CAT	transcript	22140792	22155242	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_G0000187;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000536;Name=RBMY1A1
HG04160_chrY	CAT	exon	22140792	22140939	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22140940	22142800	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22142801	22142913	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22142914	22143389	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22143390	22143493	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22143494	22148605	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22148606	22148758	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22148635	22148758	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22148635	22148637	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000536;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22148759	22150768	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22150769	22150883	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22150769	22150883	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22150884	22151838	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22151839	22151949	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22151839	22151949	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22151950	22152390	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152391	22152501	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152391	22152501	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22152502	22152935	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152936	22153046	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152936	22153046	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22153047	22153967	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22153968	22154078	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22153968	22154078	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154079	22154165	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154166	22154254	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154166	22154254	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154255	22154665	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000536:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154666	22155242	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000536:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154666	22154964	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000536:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22154962	22154964	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000536;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000536;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000536;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22140792	22155242	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_G0000187;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000537;Name=RBMY1A1
HG04160_chrY	CAT	exon	22140792	22140939	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22140940	22142800	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22142801	22142913	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22142805	22142913	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22142805	22142807	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000537;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22142914	22143389	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22143390	22143493	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22143390	22143493	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22143494	22146512	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22146513	22146690	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22146513	22146690	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22146691	22148605	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22148606	22148758	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22148606	22148758	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22148759	22150768	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22150769	22150883	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22150769	22150883	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22150884	22151838	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22151839	22151949	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22151839	22151949	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22151950	22152390	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152391	22152501	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152391	22152501	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22152502	22152935	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152936	22153046	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152936	22153046	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22153047	22154165	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154166	22154254	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154166	22154254	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154255	22154665	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000537:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154666	22155242	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000537:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154666	22154964	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000537:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22154962	22154964	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000537;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000537;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000537;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22140792	22154254	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_G0000187;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000538;Name=RBMY1A1
HG04160_chrY	CAT	exon	22140792	22140939	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22140940	22142800	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22142801	22142913	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22142805	22142913	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22142805	22142807	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000538;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22142914	22143389	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22143390	22143493	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22143390	22143493	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22143494	22146512	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22146513	22146690	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22146513	22146690	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22146691	22148605	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22148606	22148758	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22148606	22148758	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22148759	22150768	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22150769	22150883	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22150769	22150883	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22150884	22151838	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22151839	22151949	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22151839	22151949	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22151950	22152390	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152391	22152501	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152391	22152501	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22152502	22152935	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152936	22153046	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152936	22153046	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22153047	22153967	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22153968	22154078	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22153968	22154078	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154079	22154165	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000538:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154166	22154254	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000538:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154166	22154253	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000538:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22154251	22154253	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000538;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000538;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000538;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22140792	22155242	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_G0000187;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000539;Name=RBMY1A1
HG04160_chrY	CAT	exon	22140792	22140939	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22140940	22142800	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22142801	22142913	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22142805	22142913	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22142805	22142807	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000539;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22142914	22143389	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22143390	22143493	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22143390	22143493	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22143494	22146512	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22146513	22146690	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22146513	22146690	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22146691	22148605	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22148606	22148758	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22148606	22148758	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22148759	22150768	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22150769	22150883	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22150769	22150883	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22150884	22151838	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22151839	22151949	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22151839	22151949	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22151950	22152390	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152391	22152501	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152391	22152501	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22152502	22152935	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22152936	22153046	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22152936	22153046	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22153047	22153967	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22153968	22154078	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22153968	22154078	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154079	22154165	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154166	22154254	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154166	22154254	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22154255	22154665	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000539:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22154666	22155242	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000539:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22154666	22154964	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000539:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22154962	22154964	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000539;gene_id=HG04160_ch_G0000187;Parent=HG04160_ch_T0000539;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000539;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22164655	22179105	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG04160_ch_G0000188;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG04160_ch_G0000188;Name=RBMY1A1
HG04160_chrY	CAT	transcript	22164655	22179105	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_G0000188;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000540;Name=RBMY1A1
HG04160_chrY	CAT	exon	22164655	22164802	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22164803	22166663	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22166664	22166776	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22166668	22166776	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22166668	22166670	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000540;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22166777	22167252	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22167253	22167356	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22167253	22167356	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22167357	22170375	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22170376	22170553	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22170376	22170553	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22170554	22172468	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22172469	22172621	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22172469	22172621	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22172622	22174631	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22174632	22174746	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22174632	22174746	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22174747	22175701	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22175702	22175812	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22175702	22175812	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22175813	22176253	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176254	22176364	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176254	22176364	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176365	22176798	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176799	22176909	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176799	22176909	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176910	22177830	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22177831	22177941	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22177831	22177941	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22177942	22178028	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178029	22178117	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178029	22178117	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22178118	22178528	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000540:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178529	22179105	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000540:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178529	22178827	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000540:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22178825	22178827	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000540;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000540;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000540;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22164655	22179105	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_G0000188;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000541;Name=RBMY1A1
HG04160_chrY	CAT	exon	22164655	22164802	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22164803	22166663	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22166664	22166776	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22166777	22167252	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22167253	22167356	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22167357	22172468	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22172469	22172621	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22172498	22172621	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22172498	22172500	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000541;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22172622	22174631	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22174632	22174746	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22174632	22174746	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22174747	22175701	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22175702	22175812	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22175702	22175812	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22175813	22176253	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176254	22176364	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176254	22176364	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176365	22176798	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176799	22176909	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176799	22176909	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176910	22177830	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22177831	22177941	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22177831	22177941	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22177942	22178028	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178029	22178117	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178029	22178117	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22178118	22178528	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000541:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178529	22179105	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000541:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178529	22178827	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000541:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22178825	22178827	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000541;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000541;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000541;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22164655	22178117	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_G0000188;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000542;Name=RBMY1A1
HG04160_chrY	CAT	exon	22164655	22164802	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22164803	22166663	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22166664	22166776	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22166668	22166776	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22166668	22166670	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000542;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22166777	22167252	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22167253	22167356	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22167253	22167356	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22167357	22170375	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22170376	22170553	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22170376	22170553	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22170554	22172468	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22172469	22172621	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22172469	22172621	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22172622	22174631	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22174632	22174746	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22174632	22174746	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22174747	22175701	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22175702	22175812	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22175702	22175812	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22175813	22176253	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176254	22176364	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176254	22176364	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176365	22176798	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176799	22176909	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176799	22176909	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176910	22177830	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22177831	22177941	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22177831	22177941	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22177942	22178028	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000542:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178029	22178117	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000542:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178029	22178116	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000542:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22178114	22178116	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000542;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000542;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000542;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22164655	22179105	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_G0000188;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000543;Name=RBMY1A1
HG04160_chrY	CAT	exon	22164655	22164802	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22164803	22166663	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22166664	22166776	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22166668	22166776	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22166668	22166670	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000543;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22166777	22167252	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22167253	22167356	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22167253	22167356	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22167357	22170375	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22170376	22170553	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22170376	22170553	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22170554	22172468	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22172469	22172621	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22172469	22172621	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22172622	22174631	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22174632	22174746	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22174632	22174746	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22174747	22175701	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22175702	22175812	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22175702	22175812	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22175813	22176253	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176254	22176364	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176254	22176364	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176365	22176798	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22176799	22176909	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22176799	22176909	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22176910	22178028	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178029	22178117	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178029	22178117	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22178118	22178528	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000543:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22178529	22179105	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000543:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22178529	22178827	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000543:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22178825	22178827	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG04160_ch_T0000543;gene_id=HG04160_ch_G0000188;Parent=HG04160_ch_T0000543;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000543;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22188197	22202645	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_462.1;gene_id=HG04160_ch_G0000189;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG04160_ch_G0000189;Name=RBMY1A1
HG04160_chrY	CAT	transcript	22188197	22201657	1000	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_G0000189;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000544;Name=RBMY1A1
HG04160_chrY	CAT	exon	22188197	22188344	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22188345	22190205	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190206	22190318	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190210	22190318	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22190210	22190212	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000544;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190319	22190792	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190793	22190896	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190793	22190896	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190897	22193915	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22193916	22194093	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22193916	22194093	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22194094	22196008	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22196009	22196161	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22196009	22196161	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22196162	22198171	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22198172	22198286	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22198172	22198286	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22198287	22199241	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199242	22199352	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199242	22199352	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199353	22199793	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199794	22199904	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199794	22199904	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199905	22200338	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22200339	22200449	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22200339	22200449	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22200450	22201370	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201371	22201481	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201371	22201481	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201482	22201568	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000544:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201569	22201657	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000544:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201569	22201656	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000544:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22201654	22201656	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1;transcript_id=HG04160_ch_T0000544;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000544;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000544;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22188197	22202645	1000	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_G0000189;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000545;Name=RBMY1A1
HG04160_chrY	CAT	exon	22188197	22188344	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22188345	22190205	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190206	22190318	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190210	22190318	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22190210	22190212	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000545;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190319	22190792	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190793	22190896	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190793	22190896	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190897	22193915	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22193916	22194093	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22193916	22194093	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22194094	22196008	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22196009	22196161	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22196009	22196161	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22196162	22198171	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22198172	22198286	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22198172	22198286	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22198287	22199241	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199242	22199352	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199242	22199352	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199353	22199793	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199794	22199904	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199794	22199904	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199905	22200338	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22200339	22200449	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22200339	22200449	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22200450	22201568	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201569	22201657	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201569	22201657	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201658	22202068	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000545:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22202069	22202645	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000545:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22202069	22202367	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000545:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22202365	22202367	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2;transcript_id=HG04160_ch_T0000545;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000545;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000545;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22188197	22202645	1000	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_G0000189;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000546;Name=RBMY1A1
HG04160_chrY	CAT	exon	22188197	22188344	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22188345	22190205	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190206	22190318	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190319	22190792	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190793	22190896	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190897	22196008	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22196009	22196161	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22196038	22196161	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22196038	22196040	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000546;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22196162	22198171	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22198172	22198286	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22198172	22198286	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22198287	22199241	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199242	22199352	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199242	22199352	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199353	22199793	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199794	22199904	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199794	22199904	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199905	22200338	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22200339	22200449	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22200339	22200449	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22200450	22201370	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201371	22201481	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201371	22201481	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201482	22201568	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201569	22201657	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201569	22201657	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201658	22202068	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000546:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22202069	22202645	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000546:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22202069	22202367	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000546:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22202365	22202367	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3;transcript_id=HG04160_ch_T0000546;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000546;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000546;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22188197	22202645	1000	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_G0000189;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000547;Name=RBMY1A1
HG04160_chrY	CAT	exon	22188197	22188344	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22188345	22190205	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190206	22190318	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190210	22190318	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22190210	22190212	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000547;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190319	22190792	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22190793	22190896	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22190793	22190896	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22190897	22193915	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22193916	22194093	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22193916	22194093	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22194094	22196008	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22196009	22196161	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22196009	22196161	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22196162	22198171	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22198172	22198286	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22198172	22198286	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22198287	22199241	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199242	22199352	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199242	22199352	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199353	22199793	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22199794	22199904	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22199794	22199904	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22199905	22200338	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22200339	22200449	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22200339	22200449	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22200450	22201370	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201371	22201481	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201371	22201481	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201482	22201568	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22201569	22201657	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22201569	22201657	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22201658	22202068	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000547:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22202069	22202645	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000547:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22202069	22202367	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000547:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22202365	22202367	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4;transcript_id=HG04160_ch_T0000547;gene_id=HG04160_ch_G0000189;Parent=HG04160_ch_T0000547;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000547;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22205517	22237830	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG04160_ch_G0000190;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000190;Name=RBMY1D
HG04160_chrY	CAT	transcript	22205517	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000548;Name=RBMY1D
HG04160_chrY	CAT	exon	22205517	22205537	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22205538	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000548;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22224910	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22224911	22225021	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22224911	22225021	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225022	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000548:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000548:11;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000548:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000548;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000548;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000548;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000549;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000549;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22224910	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22224911	22225021	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22224911	22225021	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225022	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000549:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000549:11;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000549:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000549;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000549;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000549;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000550;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000550;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000550:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000550:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000550:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000550;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000550;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000550;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000551;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22212557	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22212558	22212622	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22212623	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213808	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213808	22213810	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000551;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214346	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214347	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214347	22214436	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000551:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000551:11;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000551:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000551;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000551;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000551;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000552;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000552;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000552:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000552:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000552:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000552;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000552;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000552;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22227603	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000553;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000553;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22224910	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22224911	22225021	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22224911	22225021	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225022	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22226444	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000553:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22226445	22227603	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000553:11;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22226445	22226452	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000553:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22226450	22226452	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000553;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000553;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000553;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22211737	22237830	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000554;Name=RBMY1D
HG04160_chrY	CAT	exon	22211737	22211884	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22211885	22213745	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22213746	22213858	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22213750	22213858	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22213750	22213752	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000554;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22213859	22214332	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22214333	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22214333	22214436	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22217455	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22217456	22217633	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22217456	22217633	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22217634	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219549	22219701	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22224910	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22224911	22225021	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22224911	22225021	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225022	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:9;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22236446	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000554:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22236447	22237830	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000554:11;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22236447	22236523	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000554:10;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22236521	22236523	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000554;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000554;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000554;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22214347	22226185	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_G0000190;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG04160_ch_T0000555;Name=RBMY1D
HG04160_chrY	CAT	exon	22214347	22214436	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22214437	22219548	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22219549	22219701	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22219578	22219701	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:0;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22219578	22219580	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG04160_ch_T0000555;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22219702	22221711	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22221712	22221826	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22221712	22221826	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:1;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22221827	22222781	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22222782	22222892	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22222782	22222892	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:2;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22222893	22223333	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223334	22223444	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223334	22223444	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:3;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223445	22223878	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22223879	22223989	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22223879	22223989	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:4;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22223990	22224910	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22224911	22225021	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22224911	22225021	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:5;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225022	22225108	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225109	22225197	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225109	22225197	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:6;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22225198	22225608	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG04160_ch_T0000555:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22225609	22226185	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG04160_ch_T0000555:8;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22225609	22225907	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG04160_ch_T0000555:7;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22225905	22225907	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000555;gene_id=HG04160_ch_G0000190;Parent=HG04160_ch_T0000555;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG04160_ch_T0000555;Name=RBMY1D;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22245894	22248147	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG04160_ch_G0000191;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG04160_ch_G0000191;Name=LOC105379266
HG04160_chrY	CAT	transcript	22245894	22248147	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000556;gene_id=HG04160_ch_G0000191;Parent=HG04160_ch_G0000191;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG04160_ch_T0000556;Name=LOC105379266
HG04160_chrY	CAT	exon	22245894	22247174	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000556;gene_id=HG04160_ch_G0000191;Parent=HG04160_ch_T0000556;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG04160_ch_T0000556:0;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22247175	22247852	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000556;gene_id=HG04160_ch_G0000191;Parent=HG04160_ch_T0000556;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG04160_ch_T0000556:0;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22247853	22248147	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG04160_ch_T0000556;gene_id=HG04160_ch_G0000191;Parent=HG04160_ch_T0000556;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG04160_ch_T0000556:1;Name=LOC105379266;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22260455	22271521	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG04160_ch_G0000192;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG04160_ch_G0000192;Name=TTTY13
HG04160_chrY	CAT	transcript	22260455	22271521	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_G0000192;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG04160_ch_T0000557;Name=TTTY13
HG04160_chrY	CAT	exon	22260455	22260517	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:0;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22260518	22261637	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG04160_ch_T0000557:0;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22261638	22261729	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:1;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22261730	22264355	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG04160_ch_T0000557:1;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22264356	22264517	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:2;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22264518	22266126	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG04160_ch_T0000557:2;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22266127	22266225	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:3;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22266226	22266820	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG04160_ch_T0000557:3;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22266821	22266982	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:4;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22266983	22271440	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG04160_ch_T0000557:4;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22271441	22271521	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG04160_ch_T0000557;gene_id=HG04160_ch_G0000192;Parent=HG04160_ch_T0000557;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG04160_ch_T0000557:5;Name=TTTY13;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22446377	22461033	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG04160_ch_G0000193;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG04160_ch_G0000193;Name=LOC105377236
HG04160_chrY	CAT	transcript	22446377	22459801	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_G0000193;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG04160_ch_T0000558;Name=LOC105377236
HG04160_chrY	CAT	exon	22446377	22447920	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000558:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22447921	22455299	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000558:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22455300	22455435	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000558:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22455436	22458430	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000558:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458431	22458592	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000558:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22458593	22458836	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000558:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458837	22459801	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG04160_ch_T0000558;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000558;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000558:3;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22446377	22459801	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_G0000193;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG04160_ch_T0000559;Name=LOC105377236
HG04160_chrY	CAT	exon	22446377	22447920	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000559:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22447921	22455299	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000559:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22455300	22455435	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000559:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22455436	22458430	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000559:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458431	22458505	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000559:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22458506	22458836	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000559:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458837	22459801	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG04160_ch_T0000559;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000559;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000559:3;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22446377	22461033	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_G0000193;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG04160_ch_T0000560;Name=LOC105377236
HG04160_chrY	CAT	exon	22446377	22447920	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000560:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22447921	22455299	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000560:0;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22455300	22455435	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000560:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22455436	22458430	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000560:1;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458431	22458592	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000560:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22458593	22458836	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000560:2;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22458837	22459622	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000560:3;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22459623	22460877	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG04160_ch_T0000560:3;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22460878	22461033	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG04160_ch_T0000560;gene_id=HG04160_ch_G0000193;Parent=HG04160_ch_T0000560;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG04160_ch_T0000560:4;Name=LOC105377236;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22473496	22476384	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG04160_ch_G0000194;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG04160_ch_G0000194;Name=LOC105377237
HG04160_chrY	CAT	transcript	22473496	22476384	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_G0000194;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG04160_ch_T0000561;Name=LOC105377237
HG04160_chrY	CAT	exon	22473496	22474733	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_T0000561;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG04160_ch_T0000561:0;Name=LOC105377237;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22474734	22475905	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_T0000561;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG04160_ch_T0000561:0;Name=LOC105377237;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22475906	22476065	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_T0000561;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG04160_ch_T0000561:1;Name=LOC105377237;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22476066	22476225	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_T0000561;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG04160_ch_T0000561:1;Name=LOC105377237;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22476226	22476384	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG04160_ch_T0000561;gene_id=HG04160_ch_G0000194;Parent=HG04160_ch_T0000561;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG04160_ch_T0000561:2;Name=LOC105377237;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22517301	22531728	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;gene_id=HG04160_ch_G0000195;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG04160_ch_G0000195;Name=RBMY1A1
HG04160_chrY	CAT	transcript	22517301	22531728	1000	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000562;Name=RBMY1A1
HG04160_chrY	CAT	exon	22517301	22517877	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22517579	22517877	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22517579	22517581	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000562;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22517878	22518288	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518289	22518377	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518289	22518377	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518378	22519495	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22519496	22519606	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22519496	22519606	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22519607	22520040	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520041	22520151	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520041	22520151	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520152	22520592	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520593	22520703	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520593	22520703	.	-	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520704	22521658	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22521659	22521773	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22521659	22521773	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22521774	22523783	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22523784	22523936	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22523784	22523936	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22523937	22525851	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22525852	22526029	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22525852	22526029	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22526030	22529048	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529049	22529152	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529049	22529152	.	-	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529153	22529606	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529607	22529719	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529607	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22529713	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000562;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529720	22531580	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000562:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22531581	22531728	.	-	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1,hg002_chrY_paternal_475.1;transcript_id=HG04160_ch_T0000562;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000562;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000562:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22517301	22531728	1000	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000563;Name=RBMY1A1
HG04160_chrY	CAT	exon	22517301	22517877	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22517579	22517877	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22517579	22517581	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000563;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22517878	22518288	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518289	22518377	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518289	22518377	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518378	22518463	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518464	22518574	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518464	22518574	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518575	22519495	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22519496	22519606	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22519496	22519606	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22519607	22520040	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520041	22520151	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520041	22520151	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520152	22520592	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520593	22520703	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520593	22520703	.	-	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520704	22521658	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22521659	22521773	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22521659	22521773	.	-	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22521774	22523783	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22523784	22523936	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22523784	22523907	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22523905	22523907	.	-	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000563;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22523937	22529048	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529049	22529152	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529153	22529606	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529607	22529719	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529720	22531580	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000563:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22531581	22531728	.	-	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2,hg002_chrY_paternal_475.2;transcript_id=HG04160_ch_T0000563;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000563;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000563:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22517301	22531728	1000	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000564;Name=RBMY1A1
HG04160_chrY	CAT	exon	22517301	22517877	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22517579	22517877	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22517579	22517581	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000564;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22517878	22518288	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518289	22518377	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518289	22518377	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518378	22518463	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518464	22518574	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518464	22518574	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518575	22519495	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22519496	22519606	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22519496	22519606	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22519607	22520040	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520041	22520151	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520041	22520151	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520152	22520592	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520593	22520703	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520593	22520703	.	-	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520704	22521658	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22521659	22521773	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22521659	22521773	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22521774	22523783	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22523784	22523936	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22523784	22523936	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22523937	22525851	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22525852	22526029	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22525852	22526029	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22526030	22529048	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529049	22529152	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529049	22529152	.	-	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529153	22529606	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529607	22529719	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529607	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000564:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22529713	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000564;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529720	22531580	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000564:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22531581	22531728	.	-	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3,hg002_chrY_paternal_475.3;transcript_id=HG04160_ch_T0000564;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000564;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000564:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22518289	22531728	1000	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_G0000195;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG04160_ch_T0000565;Name=RBMY1A1
HG04160_chrY	CAT	exon	22518289	22518377	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518290	22518377	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22518290	22518292	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG04160_ch_T0000565;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518378	22518463	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22518464	22518574	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22518464	22518574	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22518575	22519495	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22519496	22519606	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22519496	22519606	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22519607	22520040	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520041	22520151	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520041	22520151	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520152	22520592	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22520593	22520703	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22520593	22520703	.	-	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22520704	22521658	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22521659	22521773	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22521659	22521773	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22521774	22523783	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22523784	22523936	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22523784	22523936	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22523937	22525851	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22525852	22526029	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22525852	22526029	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22526030	22529048	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529049	22529152	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529049	22529152	.	-	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529153	22529606	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22529607	22529719	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22529607	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG04160_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22529713	22529715	.	-	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG04160_ch_T0000565;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22529720	22531580	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG04160_ch_T0000565:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22531581	22531728	.	-	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4,hg002_chrY_paternal_475.4;transcript_id=HG04160_ch_T0000565;gene_id=HG04160_ch_G0000195;Parent=HG04160_ch_T0000565;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG04160_ch_T0000565:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22539379	22555230	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG04160_ch_G0000196;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000196;Name=RBMY1E
HG04160_chrY	CAT	transcript	22539379	22555230	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_G0000196;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG04160_ch_T0000566;Name=RBMY1E
HG04160_chrY	CAT	exon	22539379	22540560	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22540553	22540560	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22540553	22540555	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG04160_ch_T0000566;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22540561	22541807	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541808	22541896	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541808	22541896	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541897	22541982	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541983	22542093	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541983	22542093	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22542094	22543014	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543015	22543125	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543015	22543125	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543126	22543559	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543560	22543670	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543560	22543670	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543671	22544111	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22544112	22544222	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22544112	22544222	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22544223	22545177	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22545178	22545292	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22545178	22545292	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22545293	22547302	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22547303	22547455	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22547303	22547455	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22547456	22549370	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22549371	22549548	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22549371	22549548	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22549549	22552567	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22552568	22552671	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22552568	22552671	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22552672	22553143	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22553144	22553256	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22553144	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000566:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22553250	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG04160_ch_T0000566;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22553257	22555117	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000566:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22555118	22555230	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000566;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000566;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000566:11;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22540824	22552658	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_G0000196;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG04160_ch_T0000567;Name=RBMY1E
HG04160_chrY	CAT	exon	22540824	22541396	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541098	22541396	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22541098	22541100	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG04160_ch_T0000567;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541397	22541807	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541808	22541896	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541808	22541896	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541897	22541982	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541983	22542093	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541983	22542093	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22542094	22543014	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543015	22543125	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543015	22543125	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543126	22543559	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543560	22543670	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543560	22543670	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543671	22544111	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22544112	22544222	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22544112	22544222	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22544223	22545177	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22545178	22545292	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22545178	22545292	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22545293	22547302	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22547303	22547455	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22547303	22547426	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000567:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22547424	22547426	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG04160_ch_T0000567;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22547456	22552567	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000567:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22552568	22552658	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000567;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000567;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000567:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22540824	22555230	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_G0000196;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG04160_ch_T0000568;Name=RBMY1E
HG04160_chrY	CAT	exon	22540824	22541396	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541098	22541396	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22541098	22541100	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG04160_ch_T0000568;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541397	22541807	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541808	22541896	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541808	22541896	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541897	22541982	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541983	22542093	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541983	22542093	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22542094	22543014	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543015	22543125	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543015	22543125	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543126	22543559	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543560	22543670	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543560	22543670	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543671	22544111	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22544112	22544222	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22544112	22544222	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22544223	22545177	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22545178	22545292	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22545178	22545292	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22545293	22547302	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22547303	22547455	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22547303	22547455	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22547456	22549370	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22549371	22549548	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22549371	22549548	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22549549	22552567	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22552568	22552671	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22552568	22552671	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22552672	22553143	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22553144	22553256	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22553144	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000568:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22553250	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG04160_ch_T0000568;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22553257	22555117	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000568:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22555118	22555230	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000568;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000568;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000568:11;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22540824	22555230	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_G0000196;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG04160_ch_T0000569;Name=RBMY1E
HG04160_chrY	CAT	exon	22540824	22541396	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541098	22541396	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22541098	22541100	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG04160_ch_T0000569;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541397	22541807	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541808	22541896	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541808	22541896	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541897	22543014	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543015	22543125	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543015	22543125	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543126	22543559	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22543560	22543670	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22543560	22543670	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22543671	22544111	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22544112	22544222	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22544112	22544222	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22544223	22545177	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22545178	22545292	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22545178	22545292	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22545293	22547302	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22547303	22547455	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22547303	22547455	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22547456	22549370	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22549371	22549548	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22549371	22549548	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22549549	22552567	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22552568	22552671	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22552568	22552671	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22552672	22553143	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22553144	22553256	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22553144	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000569:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22553250	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG04160_ch_T0000569;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22553257	22555117	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000569:9;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22555118	22555230	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000569;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000569;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000569:10;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22540824	22555230	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_G0000196;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG04160_ch_T0000570;Name=RBMY1E
HG04160_chrY	CAT	exon	22540824	22541396	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541098	22541396	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22541098	22541100	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG04160_ch_T0000570;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541397	22541807	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:0;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22541808	22541896	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22541808	22541896	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22541897	22544111	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:1;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22544112	22544222	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22544112	22544222	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22544223	22545177	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:2;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22545178	22545292	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22545178	22545292	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22545293	22547302	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:3;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22547303	22547455	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22547303	22547455	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22547456	22549370	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:4;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22549371	22549548	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22549371	22549548	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22549549	22552567	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:5;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22552568	22552671	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22552568	22552671	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22552672	22553143	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:6;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22553144	22553256	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22553144	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG04160_ch_T0000570:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22553250	22553252	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG04160_ch_T0000570;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22553257	22555117	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG04160_ch_T0000570:7;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22555118	22555230	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000570;gene_id=HG04160_ch_G0000196;Parent=HG04160_ch_T0000570;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG04160_ch_T0000570:8;Name=RBMY1E;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22665551	22667548	.	+	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;gene_id=HG04160_ch_G0000197;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG04160_ch_G0000197;Name=LOC107987357
HG04160_chrY	CAT	transcript	22665551	22667548	1000	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_G0000197;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG04160_ch_T0000571;Name=LOC107987357
HG04160_chrY	CAT	exon	22665551	22665633	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_T0000571;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG04160_ch_T0000571:0;Name=LOC107987357;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22665634	22665750	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_T0000571;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG04160_ch_T0000571:0;Name=LOC107987357;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22665751	22665811	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_T0000571;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG04160_ch_T0000571:1;Name=LOC107987357;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22665812	22667346	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_T0000571;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG04160_ch_T0000571:1;Name=LOC107987357;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22667347	22667548	.	+	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;transcript_id=HG04160_ch_T0000571;gene_id=HG04160_ch_G0000197;Parent=HG04160_ch_T0000571;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG04160_ch_T0000571:2;Name=LOC107987357;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22708959	22733212	.	-	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_486.1;gene_id=HG04160_ch_G0000198;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000198;Name=PRY
HG04160_chrY	CAT	transcript	22708959	22733212	100	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_G0000198;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG04160_ch_T0000572;Name=PRY
HG04160_chrY	CAT	exon	22708959	22709784	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG04160_ch_T0000572:0;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22709526	22709784	.	-	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG04160_ch_T0000572:0;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22709526	22709528	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG04160_ch_T0000572;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22709785	22719282	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG04160_ch_T0000572:0;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22719283	22719398	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG04160_ch_T0000572:1;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22719283	22719398	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG04160_ch_T0000572:1;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22719399	22721973	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG04160_ch_T0000572:1;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22721974	22722094	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG04160_ch_T0000572:2;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22721974	22722042	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG04160_ch_T0000572:2;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22722040	22722042	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG04160_ch_T0000572;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22722095	22732936	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG04160_ch_T0000572:2;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22732937	22733023	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG04160_ch_T0000572:3;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22733024	22733124	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG04160_ch_T0000572:3;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22733125	22733212	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000572;gene_id=HG04160_ch_G0000198;Parent=HG04160_ch_T0000572;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG04160_ch_T0000572:4;Name=PRY;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22738897	22784730	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1;gene_id=HG04160_ch_G0000199;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG04160_ch_G0000199;Name=LOC102725532
HG04160_chrY	CAT	transcript	22738897	22784730	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_G0000199;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG04160_ch_T0000573;Name=LOC102725532
HG04160_chrY	CAT	exon	22738897	22739574	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:0;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22739575	22740089	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:0;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22740090	22740207	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:1;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22740208	22740751	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:1;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22740752	22740948	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:2;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22740949	22741068	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:2;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22741069	22741154	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:3;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22741155	22742954	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:3;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22742955	22743290	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:4;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22743291	22744756	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:4;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22744757	22744846	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:5;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22744847	22758477	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:5;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22758478	22758831	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:6;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22758832	22759261	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:6;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22759262	22759380	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:7;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22759381	22766558	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:7;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22766559	22766644	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:8;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22766645	22766952	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:8;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22766953	22767175	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:9;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22767176	22777141	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:9;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22777142	22777282	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:10;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22777283	22783829	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:10;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22783830	22784139	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:11;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22784140	22784473	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG04160_ch_T0000573:11;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22784474	22784730	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG04160_ch_T0000573;gene_id=HG04160_ch_G0000199;Parent=HG04160_ch_T0000573;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG04160_ch_T0000573:12;Name=LOC102725532;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22782177	22784024	.	+	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;alternative_source_transcripts=hg002_chrY_paternal_488.1;gene_id=HG04160_ch_G0000200;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG04160_ch_G0000200;Name=TTTY6B
HG04160_chrY	CAT	transcript	22782177	22784024	1000	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_G0000200;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG04160_ch_T0000574;Name=TTTY6B
HG04160_chrY	CAT	exon	22782177	22782269	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_T0000574;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG04160_ch_T0000574:0;Name=TTTY6B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22782270	22782487	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_T0000574;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG04160_ch_T0000574:0;Name=TTTY6B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22782488	22782625	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_T0000574;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG04160_ch_T0000574:1;Name=TTTY6B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22782626	22783782	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_T0000574;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG04160_ch_T0000574:1;Name=TTTY6B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22783783	22784024	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG04160_ch_T0000574;gene_id=HG04160_ch_G0000200;Parent=HG04160_ch_T0000574;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG04160_ch_T0000574:2;Name=TTTY6B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22798744	22820203	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;gene_id=HG04160_ch_G0000201;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=augTM,transMap;ID=HG04160_ch_G0000201;Name=RBMY1J
HG04160_chrY	CAT	transcript	22798744	22820203	9990	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_G0000201;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG04160_ch_T0000575;Name=RBMY1J
HG04160_chrY	CAT	exon	22798744	22800247	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22800237	22800247	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22800237	22800239	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG04160_ch_T0000575;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22800248	22802840	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22802841	22802987	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22802841	22802987	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22802988	22806720	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806721	22806809	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806721	22806809	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806810	22806895	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806896	22807006	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806896	22807006	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22807007	22807929	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22807930	22808040	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22807930	22808040	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808041	22808474	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22808475	22808585	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22808475	22808585	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808586	22809025	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22809026	22809136	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22809026	22809136	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22809137	22810091	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22810092	22810206	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22810092	22810206	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22810207	22812216	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22812217	22812369	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22812217	22812369	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22812370	22814284	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22814285	22814462	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22814285	22814462	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22814463	22817485	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22817486	22817589	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22817486	22817589	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22817590	22818055	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22818056	22818168	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:11;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22818056	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000575:11;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22818162	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG04160_ch_T0000575;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22818169	22820029	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000575:11;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22820030	22820203	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000575;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000575;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000575:12;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22805733	22817577	9990	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_G0000201;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG04160_ch_T0000576;Name=RBMY1J
HG04160_chrY	CAT	exon	22805733	22806309	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806011	22806309	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22806011	22806013	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG04160_ch_T0000576;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806310	22806720	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806721	22806809	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806721	22806809	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806810	22806895	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806896	22807006	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806896	22807006	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22807007	22807929	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22807930	22808040	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22807930	22808040	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808041	22808474	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22808475	22808585	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22808475	22808585	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808586	22809025	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22809026	22809136	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22809026	22809136	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22809137	22810091	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22810092	22810206	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22810092	22810206	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22810207	22812216	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22812217	22812369	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22812217	22812340	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000576:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22812338	22812340	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG04160_ch_T0000576;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22812370	22817485	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000576:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22817486	22817577	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000576;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000576;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000576:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22805733	22820203	9990	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_G0000201;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG04160_ch_T0000577;Name=RBMY1J
HG04160_chrY	CAT	exon	22805733	22806309	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806011	22806309	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22806011	22806013	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG04160_ch_T0000577;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806310	22806720	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806721	22806809	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806721	22806809	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806810	22806895	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806896	22807006	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806896	22807006	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22807007	22807929	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22807930	22808040	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22807930	22808040	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808041	22808474	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22808475	22808585	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22808475	22808585	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808586	22809025	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22809026	22809136	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22809026	22809136	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22809137	22810091	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22810092	22810206	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22810092	22810206	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22810207	22812216	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22812217	22812369	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22812217	22812369	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22812370	22814284	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22814285	22814462	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22814285	22814462	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22814463	22817485	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22817486	22817589	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22817486	22817589	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22817590	22818055	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22818056	22818168	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22818056	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000577:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22818162	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG04160_ch_T0000577;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22818169	22820029	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000577:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22820030	22820203	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000577;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000577;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000577:11;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	22805733	22820203	9990	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_G0000201;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG04160_ch_T0000578;Name=RBMY1J
HG04160_chrY	CAT	exon	22805733	22806309	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806011	22806309	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	22806011	22806013	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG04160_ch_T0000578;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806310	22806720	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:0;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22806721	22806809	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22806721	22806809	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22806810	22807929	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:1;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22807930	22808040	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22807930	22808040	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808041	22808474	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:2;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22808475	22808585	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22808475	22808585	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22808586	22809025	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:3;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22809026	22809136	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22809026	22809136	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22809137	22810091	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:4;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22810092	22810206	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22810092	22810206	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22810207	22812216	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:5;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22812217	22812369	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22812217	22812369	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22812370	22814284	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:6;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22814285	22814462	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22814285	22814462	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22814463	22817485	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:7;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22817486	22817589	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22817486	22817589	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22817590	22818055	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:8;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22818056	22818168	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	22818056	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG04160_ch_T0000578:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	22818162	22818164	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG04160_ch_T0000578;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22818169	22820029	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG04160_ch_T0000578:9;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22820030	22820203	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000578;gene_id=HG04160_ch_G0000201;Parent=HG04160_ch_T0000578;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG04160_ch_T0000578:10;Name=RBMY1J;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22934050	22936128	.	-	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1;gene_id=HG04160_ch_G0000202;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG04160_ch_G0000202;Name=TTTY5
HG04160_chrY	CAT	transcript	22934050	22936128	1000	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG04160_ch_T0000579;gene_id=HG04160_ch_G0000202;Parent=HG04160_ch_G0000202;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG04160_ch_T0000579;Name=TTTY5
HG04160_chrY	CAT	exon	22934050	22935040	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG04160_ch_T0000579;gene_id=HG04160_ch_G0000202;Parent=HG04160_ch_T0000579;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG04160_ch_T0000579:0;Name=TTTY5;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22935041	22935557	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG04160_ch_T0000579;gene_id=HG04160_ch_G0000202;Parent=HG04160_ch_T0000579;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG04160_ch_T0000579:0;Name=TTTY5;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22935558	22936128	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG04160_ch_T0000579;gene_id=HG04160_ch_G0000202;Parent=HG04160_ch_T0000579;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG04160_ch_T0000579:1;Name=TTTY5;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22946115	22953461	.	+	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=HG04160_ch_G0000203;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG04160_ch_G0000203;Name=RBMY2FP
HG04160_chrY	CAT	transcript	22946115	22953461	1000	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_G0000203;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG04160_ch_T0000580;Name=RBMY2FP
HG04160_chrY	CAT	exon	22946115	22946226	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG04160_ch_T0000580:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22946227	22948115	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG04160_ch_T0000580:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22948116	22948228	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG04160_ch_T0000580:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22948229	22948650	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG04160_ch_T0000580:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22948651	22948754	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG04160_ch_T0000580:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22948755	22951748	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG04160_ch_T0000580:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22951749	22953461	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG04160_ch_T0000580;gene_id=HG04160_ch_G0000203;Parent=HG04160_ch_T0000580;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG04160_ch_T0000580:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	22953934	22957640	.	+	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1;gene_id=HG04160_ch_G0000204;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG04160_ch_G0000204;Name=LOC100652931
HG04160_chrY	CAT	transcript	22953934	22957640	1000	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_G0000204;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG04160_ch_T0000581;Name=LOC100652931
HG04160_chrY	CAT	exon	22953934	22954003	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_T0000581;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG04160_ch_T0000581:0;Name=LOC100652931;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22954004	22956038	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_T0000581;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG04160_ch_T0000581:0;Name=LOC100652931;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22956039	22956153	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_T0000581;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG04160_ch_T0000581:1;Name=LOC100652931;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	22956154	22957618	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_T0000581;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG04160_ch_T0000581:1;Name=LOC100652931;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	22957619	22957640	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG04160_ch_T0000581;gene_id=HG04160_ch_G0000204;Parent=HG04160_ch_T0000581;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG04160_ch_T0000581:2;Name=LOC100652931;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23040747	23060791	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;gene_id=HG04160_ch_G0000205;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=augTM,transMap;ID=HG04160_ch_G0000205;Name=RBMY1F
HG04160_chrY	CAT	transcript	23040747	23055134	9990	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000582;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000582;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23053860	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23053861	23053971	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23053861	23053971	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23053972	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054141	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054141	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054142	23054557	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000582:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054558	23055134	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000582:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054558	23054630	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000582:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23054628	23054630	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000582;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000582;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000582;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23040747	23055134	9990	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000583;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000583;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054146	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054146	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054147	23054557	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000583:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054558	23055134	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000583:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054558	23054856	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000583:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23054854	23054856	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=299.928;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000583;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000583;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000583;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23040747	23055134	9990	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000584;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000584;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23053860	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23053861	23053971	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23053861	23053971	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23053972	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054146	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054146	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054147	23054557	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000584:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054558	23055134	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000584:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054558	23054856	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000584:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23054854	23054856	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=299.933;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000584;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000584;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000584;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23040747	23060791	9990	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000585;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000585;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23053860	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23053861	23053971	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23053861	23053971	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23053972	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054146	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054146	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054147	23057879	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23057880	23058026	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23057880	23058026	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23058027	23060619	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000585:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23060620	23060791	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000585:12;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23060620	23060630	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000585:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23060628	23060630	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000585;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000585;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000585;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23040747	23060791	9990	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000586;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000586;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054146	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054146	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054147	23057879	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23057880	23058026	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23057880	23058026	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23058027	23060619	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000586:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23060620	23060791	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000586:11;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23060620	23060630	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000586:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23060628	23060630	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=299.919;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000586;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000586;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000586;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23040747	23060791	9990	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_G0000205;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG04160_ch_T0000587;Name=RBMY1F
HG04160_chrY	CAT	exon	23040747	23040835	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23040836	23042696	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23042697	23042809	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23042701	23042809	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:0;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23042701	23042703	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG04160_ch_T0000587;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23042810	23043277	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23043278	23043381	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23043278	23043381	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:1;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23043382	23046404	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23046405	23046582	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23046405	23046582	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:2;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23046583	23048497	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23048498	23048650	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23048498	23048650	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:3;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23048651	23050660	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23050661	23050775	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23050661	23050775	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:4;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23050776	23051730	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23051731	23051841	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23051731	23051841	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:5;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23051842	23052281	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052282	23052392	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052282	23052392	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:6;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052393	23052826	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23052827	23052937	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23052827	23052937	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:7;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23052938	23054057	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23054058	23054146	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23054058	23054146	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:8;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23054147	23060619	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG04160_ch_T0000587:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23060620	23060791	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG04160_ch_T0000587:10;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23060620	23060630	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG04160_ch_T0000587:9;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23060628	23060630	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=299.908;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000587;gene_id=HG04160_ch_G0000205;Parent=HG04160_ch_T0000587;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG04160_ch_T0000587;Name=RBMY1F;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23076193	23121971	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1;gene_id=HG04160_ch_G0000206;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG04160_ch_G0000206;Name=LOC101929148
HG04160_chrY	CAT	transcript	23076193	23121971	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_G0000206;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG04160_ch_T0000588;Name=LOC101929148
HG04160_chrY	CAT	exon	23076193	23076393	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:0;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23076394	23076727	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:0;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23076728	23077037	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:1;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23077038	23083584	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:1;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23083585	23083725	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:2;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23083726	23093692	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:2;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23093693	23093915	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:3;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23093916	23094223	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:3;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23094224	23094309	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:4;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23094310	23101487	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:4;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23101488	23101606	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:5;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23101607	23102036	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:5;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23102037	23102390	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:6;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23102391	23116021	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:6;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23116022	23116111	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:7;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23116112	23117577	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:7;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23117578	23117913	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:8;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23117914	23119713	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:8;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23119714	23119799	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:9;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23119800	23119919	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:9;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23119920	23120116	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:10;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23120117	23120660	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:10;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23120661	23120778	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:11;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23120779	23121293	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG04160_ch_T0000588:11;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23121294	23121971	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG04160_ch_T0000588;gene_id=HG04160_ch_G0000206;Parent=HG04160_ch_T0000588;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG04160_ch_T0000588:12;Name=LOC101929148;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23076846	23078712	.	-	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;alternative_source_transcripts=hg002_chrY_paternal_504.1;gene_id=HG04160_ch_G0000207;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG04160_ch_G0000207;Name=TTTY6
HG04160_chrY	CAT	transcript	23076846	23078712	1000	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_G0000207;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG04160_ch_T0000589;Name=TTTY6
HG04160_chrY	CAT	exon	23076846	23077084	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_T0000589;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG04160_ch_T0000589:0;Name=TTTY6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23077085	23078241	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_T0000589;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG04160_ch_T0000589:0;Name=TTTY6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23078242	23078379	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_T0000589;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG04160_ch_T0000589:1;Name=TTTY6;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23078380	23078597	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_T0000589;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG04160_ch_T0000589:1;Name=TTTY6;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23078598	23078712	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG04160_ch_T0000589;gene_id=HG04160_ch_G0000207;Parent=HG04160_ch_T0000589;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG04160_ch_T0000589:2;Name=TTTY6;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23127654	23151896	.	+	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_505.1;gene_id=HG04160_ch_G0000208;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000208;Name=PRY2
HG04160_chrY	CAT	transcript	23127654	23151896	100	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_G0000208;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG04160_ch_T0000590;Name=PRY2
HG04160_chrY	CAT	exon	23127654	23127741	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG04160_ch_T0000590:0;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23127742	23127842	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG04160_ch_T0000590:0;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23127843	23127929	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG04160_ch_T0000590:1;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23127930	23138771	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG04160_ch_T0000590:1;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23138772	23138892	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG04160_ch_T0000590:2;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23138824	23138892	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG04160_ch_T0000590:0;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23138824	23138826	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG04160_ch_T0000590;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23138893	23141467	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG04160_ch_T0000590:2;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23141468	23141583	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG04160_ch_T0000590:3;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23141468	23141583	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG04160_ch_T0000590:1;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23141584	23151070	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG04160_ch_T0000590:3;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23151071	23151896	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG04160_ch_T0000590:4;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23151071	23151329	.	+	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG04160_ch_T0000590:2;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23151327	23151329	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000590;gene_id=HG04160_ch_G0000208;Parent=HG04160_ch_T0000590;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG04160_ch_T0000590;Name=PRY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23193310	23195337	.	-	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;gene_id=HG04160_ch_G0000209;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG04160_ch_G0000209;Name=LOC107987356
HG04160_chrY	CAT	transcript	23193310	23195337	1000	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_G0000209;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG04160_ch_T0000591;Name=LOC107987356
HG04160_chrY	CAT	exon	23193310	23193511	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_T0000591;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG04160_ch_T0000591:0;Name=LOC107987356;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23193512	23195046	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_T0000591;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG04160_ch_T0000591:0;Name=LOC107987356;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23195047	23195107	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_T0000591;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG04160_ch_T0000591:1;Name=LOC107987356;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23195108	23195224	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_T0000591;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG04160_ch_T0000591:1;Name=LOC107987356;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23195225	23195337	.	-	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;transcript_id=HG04160_ch_T0000591;gene_id=HG04160_ch_G0000209;Parent=HG04160_ch_T0000591;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG04160_ch_T0000591:2;Name=LOC107987356;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23423469	23434707	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG04160_ch_G0000210;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG04160_ch_G0000210;Name=LOC107987348
HG04160_chrY	CAT	transcript	23423469	23434707	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_G0000210;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG04160_ch_T0000592;Name=LOC107987348
HG04160_chrY	CAT	exon	23423469	23423924	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000592;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000592:0;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23423925	23429894	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000592;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG04160_ch_T0000592:0;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23429895	23432059	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000592;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000592:1;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23432060	23432700	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000592;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG04160_ch_T0000592:1;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23432701	23434707	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG04160_ch_T0000592;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000592;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000592:2;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23423469	23434707	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_G0000210;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG04160_ch_T0000593;Name=LOC107987348
HG04160_chrY	CAT	exon	23423469	23423924	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000593;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000593:0;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23423925	23429426	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000593;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG04160_ch_T0000593:0;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23429427	23432059	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000593;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000593:1;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23432060	23432700	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000593;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG04160_ch_T0000593:1;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23432701	23434707	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG04160_ch_T0000593;gene_id=HG04160_ch_G0000210;Parent=HG04160_ch_T0000593;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG04160_ch_T0000593:2;Name=LOC107987348;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23488840	23489971	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_516.1;gene_id=HG04160_ch_G0000211;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG04160_ch_G0000211;Name=TTTY17A
HG04160_chrY	CAT	transcript	23488840	23489971	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG04160_ch_T0000594;gene_id=HG04160_ch_G0000211;Parent=HG04160_ch_G0000211;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG04160_ch_T0000594;Name=TTTY17A
HG04160_chrY	CAT	exon	23488840	23488899	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG04160_ch_T0000594;gene_id=HG04160_ch_G0000211;Parent=HG04160_ch_T0000594;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG04160_ch_T0000594:0;Name=TTTY17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23488900	23489865	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG04160_ch_T0000594;gene_id=HG04160_ch_G0000211;Parent=HG04160_ch_T0000594;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG04160_ch_T0000594:0;Name=TTTY17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23489866	23489971	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG04160_ch_T0000594;gene_id=HG04160_ch_G0000211;Parent=HG04160_ch_T0000594;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG04160_ch_T0000594:1;Name=TTTY17A;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23573710	23610535	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;gene_id=HG04160_ch_G0000212;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG04160_ch_G0000212;Name=TTTY4C
HG04160_chrY	CAT	transcript	23573710	23610535	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_G0000212;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG04160_ch_T0000595;Name=TTTY4C
HG04160_chrY	CAT	exon	23573710	23573870	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG04160_ch_T0000595:0;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23573871	23600878	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG04160_ch_T0000595:0;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23600879	23600954	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG04160_ch_T0000595:1;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23600955	23602758	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG04160_ch_T0000595:1;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23602759	23602866	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG04160_ch_T0000595:2;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23602867	23609534	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG04160_ch_T0000595:2;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23609535	23610535	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1,hg002_chrY_paternal_519.1;transcript_id=HG04160_ch_T0000595;gene_id=HG04160_ch_G0000212;Parent=HG04160_ch_T0000595;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG04160_ch_T0000595:3;Name=TTTY4C;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23621514	23642717	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=HG04160_ch_G0000213;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG04160_ch_G0000213;Name=BPY2B
HG04160_chrY	CAT	transcript	23621514	23642717	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_G0000213;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG04160_ch_T0000596;Name=BPY2B
HG04160_chrY	CAT	exon	23621514	23621544	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:0;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23621545	23621819	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:0;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23621820	23621942	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:1;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23621943	23625007	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:1;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23625008	23625144	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:2;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23625145	23629553	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:2;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23629554	23629672	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:3;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23629595	23629672	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG04160_ch_T0000596:0;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23629595	23629597	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG04160_ch_T0000596;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23629673	23631731	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:3;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23631732	23631849	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:4;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23631732	23631849	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG04160_ch_T0000596:1;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23631850	23634703	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:4;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23634704	23634809	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:5;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23634704	23634809	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG04160_ch_T0000596:2;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23634810	23635501	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:5;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23635502	23635626	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:6;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23635502	23635520	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG04160_ch_T0000596:3;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23635518	23635520	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG04160_ch_T0000596;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23635627	23642176	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:6;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23642177	23642301	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:7;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23642302	23642395	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG04160_ch_T0000596:7;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23642396	23642717	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG04160_ch_T0000596;gene_id=HG04160_ch_G0000213;Parent=HG04160_ch_T0000596;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG04160_ch_T0000596:8;Name=BPY2B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23743631	23746968	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=HG04160_ch_G0000214;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG04160_ch_G0000214;Name=LOC105377242
HG04160_chrY	CAT	transcript	23743631	23746968	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_G0000214;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG04160_ch_T0000597;Name=LOC105377242
HG04160_chrY	CAT	exon	23743631	23743731	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000597;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000597:0;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23743732	23746062	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000597;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG04160_ch_T0000597:0;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23746063	23746127	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000597;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000597:1;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23746128	23746789	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000597;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG04160_ch_T0000597:1;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23746790	23746968	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000597;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000597;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000597:2;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23743631	23746968	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_G0000214;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG04160_ch_T0000598;Name=LOC105377242
HG04160_chrY	CAT	exon	23743631	23743731	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000598;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000598:0;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23743732	23746089	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000598;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG04160_ch_T0000598:0;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23746090	23746127	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000598;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000598:1;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23746128	23746789	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000598;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG04160_ch_T0000598:1;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23746790	23746968	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG04160_ch_T0000598;gene_id=HG04160_ch_G0000214;Parent=HG04160_ch_T0000598;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG04160_ch_T0000598:2;Name=LOC105377242;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23766595	23816948	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;alternative_source_transcripts=hg002_chrY_paternal_526.1;gene_id=HG04160_ch_G0000215;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG04160_ch_G0000215;Name=DAZ3
HG04160_chrY	CAT	transcript	23766595	23816948	100	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_G0000215;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG04160_ch_T0000599;Name=DAZ3
HG04160_chrY	CAT	exon	23766595	23768451	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23768452	23772415	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23772416	23772514	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23772451	23772514	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23772451	23772453	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG04160_ch_T0000599;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23772515	23777087	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23777088	23777122	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23777088	23777122	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23777123	23777866	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23777867	23777938	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23777867	23777938	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23777939	23792422	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23792423	23792494	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23792423	23792494	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23792495	23794799	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23794800	23794871	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23794800	23794871	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23794872	23797195	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23797196	23797267	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23797196	23797267	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23797268	23799578	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23799579	23799650	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23799579	23799650	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23799651	23801974	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23801975	23802046	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23801975	23802046	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23802047	23804365	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23804366	23804437	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23804366	23804437	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23804438	23806810	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23806811	23806882	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23806811	23806882	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23806883	23808282	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23808283	23808422	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23808283	23808422	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23808423	23808511	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23808512	23808575	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23808512	23808575	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23808576	23809011	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23809012	23809063	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23809012	23809063	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23809064	23809623	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23809624	23809715	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23809624	23809715	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23809716	23809989	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23809990	23810136	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23809990	23810136	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23810137	23816737	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000599:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23816738	23816948	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000599:16;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23816738	23816740	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000599:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23816738	23816740	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;alternative_source_transcripts=hg002_chrY_paternal_526.1;transcript_id=HG04160_ch_T0000599;gene_id=HG04160_ch_G0000215;Parent=HG04160_ch_T0000599;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG04160_ch_T0000599;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23837473	23919050	.	+	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG04160_ch_G0000216;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG04160_ch_G0000216;Name=DAZ3
HG04160_chrY	CAT	transcript	23837473	23919050	9950	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_G0000216;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG04160_ch_T0000600;Name=DAZ3
HG04160_chrY	CAT	exon	23837473	23837683	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23837681	23837683	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	23837681	23837683	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG04160_ch_T0000600;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23837684	23855129	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:0;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23855130	23855276	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23855130	23855276	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23855277	23855550	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:1;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23855551	23855642	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23855551	23855642	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23855643	23856202	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:2;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23856203	23856254	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23856203	23856254	.	+	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23856255	23856690	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:3;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23856691	23856754	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23856691	23856754	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23856755	23856843	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:4;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23856844	23856983	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23856844	23856983	.	+	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23856984	23869224	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:5;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23869225	23869296	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23869225	23869296	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23869297	23871669	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:6;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23871670	23871741	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23871670	23871741	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23871742	23874060	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:7;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23874061	23874132	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23874061	23874132	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23874133	23876456	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:8;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23876457	23876528	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23876457	23876528	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23876529	23878838	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:9;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23878839	23878910	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23878839	23878910	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23878911	23881234	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:10;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23881235	23881306	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23881235	23881306	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23881307	23883611	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:11;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23883612	23883683	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23883612	23883683	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23883684	23907706	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:12;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23907707	23907778	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23907707	23907778	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23907779	23908522	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:13;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23908523	23908557	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23908523	23908557	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23908558	23913130	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:14;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23913131	23913229	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	23913131	23913194	.	+	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG04160_ch_T0000600:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	23913192	23913194	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG04160_ch_T0000600;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23913230	23917193	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG04160_ch_T0000600:15;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23917194	23919050	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000600;gene_id=HG04160_ch_G0000216;Parent=HG04160_ch_T0000600;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG04160_ch_T0000600:16;Name=DAZ3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	23938670	23942007	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;gene_id=HG04160_ch_G0000217;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG04160_ch_G0000217;Name=LOC105377239
HG04160_chrY	CAT	transcript	23938670	23942007	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_G0000217;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG04160_ch_T0000601;Name=LOC105377239
HG04160_chrY	CAT	exon	23938670	23938848	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000601;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000601:0;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23938849	23939510	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000601;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG04160_ch_T0000601:0;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23939511	23939548	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000601;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000601:1;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23939549	23941906	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000601;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG04160_ch_T0000601:1;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23941907	23942007	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000601;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000601;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000601:2;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	23938670	23942007	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_G0000217;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG04160_ch_T0000602;Name=LOC105377239
HG04160_chrY	CAT	exon	23938670	23938848	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000602;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000602:0;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23938849	23939510	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000602;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG04160_ch_T0000602:0;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23939511	23939575	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000602;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000602:1;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	23939576	23941906	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000602;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG04160_ch_T0000602:1;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	23941907	23942007	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;transcript_id=HG04160_ch_T0000602;gene_id=HG04160_ch_G0000217;Parent=HG04160_ch_T0000602;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG04160_ch_T0000602:2;Name=LOC105377239;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24050770	24050907	.	-	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=HG04160_ch_G0000218;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG04160_ch_G0000218;Name=LOC124900507
HG04160_chrY	CAT	transcript	24050770	24050907	1000	-	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG04160_ch_T0000603;gene_id=HG04160_ch_G0000218;Parent=HG04160_ch_G0000218;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG04160_ch_T0000603;Name=LOC124900507
HG04160_chrY	CAT	exon	24050770	24050907	.	-	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG04160_ch_T0000603;gene_id=HG04160_ch_G0000218;Parent=HG04160_ch_T0000603;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG04160_ch_T0000603:0;Name=LOC124900507;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24062911	24104415	.	+	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=HG04160_ch_G0000219;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG04160_ch_G0000219;Name=REREP2Y
HG04160_chrY	CAT	transcript	24062911	24104415	1000	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_G0000219;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG04160_ch_T0000604;Name=REREP2Y
HG04160_chrY	CAT	exon	24062911	24063313	.	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_T0000604;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG04160_ch_T0000604:0;Name=REREP2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24063314	24090132	.	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_T0000604;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG04160_ch_T0000604:0;Name=REREP2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24090133	24090205	.	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_T0000604;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG04160_ch_T0000604:1;Name=REREP2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24090206	24099825	.	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_T0000604;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG04160_ch_T0000604:1;Name=REREP2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24099826	24104415	.	+	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG04160_ch_T0000604;gene_id=HG04160_ch_G0000219;Parent=HG04160_ch_T0000604;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG04160_ch_T0000604:2;Name=REREP2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24265322	24268446	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;gene_id=HG04160_ch_G0000220;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG04160_ch_G0000220;Name=LOC107987349
HG04160_chrY	CAT	transcript	24265322	24268446	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_G0000220;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG04160_ch_T0000605;Name=LOC107987349
HG04160_chrY	CAT	exon	24265322	24265404	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_T0000605;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG04160_ch_T0000605:0;Name=LOC107987349;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24265405	24265521	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_T0000605;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG04160_ch_T0000605:0;Name=LOC107987349;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24265522	24265582	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_T0000605;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG04160_ch_T0000605:1;Name=LOC107987349;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24265583	24267117	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_T0000605;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG04160_ch_T0000605:1;Name=LOC107987349;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24267118	24268446	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;transcript_id=HG04160_ch_T0000605;gene_id=HG04160_ch_G0000220;Parent=HG04160_ch_T0000605;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG04160_ch_T0000605:2;Name=LOC107987349;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24564392	24569287	.	-	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=HG04160_ch_G0000221;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG04160_ch_G0000221;Name=TTTY3B
HG04160_chrY	CAT	transcript	24564392	24569287	1000	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_G0000221;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG04160_ch_T0000606;Name=TTTY3B
HG04160_chrY	CAT	exon	24564392	24564496	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_T0000606;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG04160_ch_T0000606:0;Name=TTTY3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24564497	24566850	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_T0000606;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG04160_ch_T0000606:0;Name=TTTY3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24566851	24566985	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_T0000606;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG04160_ch_T0000606:1;Name=TTTY3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24566986	24569183	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_T0000606;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG04160_ch_T0000606:1;Name=TTTY3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24569184	24569287	.	-	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG04160_ch_T0000606;gene_id=HG04160_ch_G0000221;Parent=HG04160_ch_T0000606;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG04160_ch_T0000606:2;Name=TTTY3B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24672292	24675688	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=HG04160_ch_G0000222;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG04160_ch_G0000222;Name=CDY1
HG04160_chrY	CAT	transcript	24672292	24675686	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_G0000222;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=HG04160_ch_T0000607;Name=CDY1
HG04160_chrY	CAT	exon	24672292	24672373	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000607;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG04160_ch_T0000607:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24672374	24673148	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000607;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG04160_ch_T0000607:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24673149	24673348	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000607;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG04160_ch_T0000607:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24673349	24673768	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000607;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG04160_ch_T0000607:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24673769	24675686	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG04160_ch_T0000607;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000607;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG04160_ch_T0000607:2;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	24672901	24675686	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_G0000222;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG04160_ch_T0000608;Name=CDY1
HG04160_chrY	CAT	exon	24672901	24673348	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG04160_ch_T0000608:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	24673276	24673348	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG04160_ch_T0000608:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	24673276	24673278	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG04160_ch_T0000608;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24673349	24673768	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG04160_ch_T0000608:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24673769	24675686	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG04160_ch_T0000608:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	24673769	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG04160_ch_T0000608:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	24675358	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG04160_ch_T0000608;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000608;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG04160_ch_T0000608;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	24672901	24675688	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_G0000222;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG04160_ch_T0000609;Name=CDY1
HG04160_chrY	CAT	exon	24672901	24673348	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG04160_ch_T0000609:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	24673328	24673348	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG04160_ch_T0000609:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	24673328	24673330	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG04160_ch_T0000609;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24673349	24673968	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG04160_ch_T0000609:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24673969	24675688	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG04160_ch_T0000609:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	24673969	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG04160_ch_T0000609:1;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	24675358	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000609;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000609;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG04160_ch_T0000609;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	24673465	24675686	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000610;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_G0000222;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG04160_ch_T0000610;Name=CDY1
HG04160_chrY	CAT	exon	24673465	24675686	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000610;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000610;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG04160_ch_T0000610:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	24673738	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000610;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000610;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG04160_ch_T0000610:0;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	24673738	24673740	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000610;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000610;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG04160_ch_T0000610;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	24675358	24675360	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG04160_ch_T0000610;gene_id=HG04160_ch_G0000222;Parent=HG04160_ch_T0000610;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG04160_ch_T0000610;Name=CDY1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24811095	24814892	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;alternative_source_transcripts=hg002_chrY_paternal_556.1;gene_id=HG04160_ch_G0000223;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG04160_ch_G0000223;Name=CSPG4P1Y
HG04160_chrY	CAT	transcript	24811095	24814892	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG04160_ch_T0000611;gene_id=HG04160_ch_G0000223;Parent=HG04160_ch_G0000223;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG04160_ch_T0000611;Name=CSPG4P1Y
HG04160_chrY	CAT	exon	24811095	24811166	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG04160_ch_T0000611;gene_id=HG04160_ch_G0000223;Parent=HG04160_ch_T0000611;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG04160_ch_T0000611:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24811167	24814169	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG04160_ch_T0000611;gene_id=HG04160_ch_G0000223;Parent=HG04160_ch_T0000611;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG04160_ch_T0000611:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24814170	24814892	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;alternative_source_transcripts=hg002_chrY_paternal_556.1;transcript_id=HG04160_ch_T0000611;gene_id=HG04160_ch_G0000223;Parent=HG04160_ch_T0000611;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG04160_ch_T0000611:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24834102	24835632	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=HG04160_ch_G0000224;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG04160_ch_G0000224;Name=LOC102724034
HG04160_chrY	CAT	transcript	24834102	24835632	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_G0000224;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG04160_ch_T0000612;Name=LOC102724034
HG04160_chrY	CAT	exon	24834102	24834127	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_T0000612;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000612:0;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24834128	24834815	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_T0000612;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG04160_ch_T0000612:0;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24834816	24834940	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_T0000612;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000612:1;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24834941	24835208	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_T0000612;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG04160_ch_T0000612:1;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24835209	24835632	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG04160_ch_T0000612;gene_id=HG04160_ch_G0000224;Parent=HG04160_ch_T0000612;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000612:2;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24837631	24842495	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=HG04160_ch_G0000225;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG04160_ch_G0000225;Name=GOLGA2P3Y
HG04160_chrY	CAT	transcript	24837631	24842495	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_G0000225;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG04160_ch_T0000613;Name=GOLGA2P3Y
HG04160_chrY	CAT	exon	24837631	24837714	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24837715	24837796	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24837797	24837889	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24837890	24837978	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24837979	24838167	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24838168	24838422	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24838423	24838511	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24838512	24838931	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24838932	24839006	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24839007	24840362	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24840363	24840420	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24840421	24840716	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24840717	24841068	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24841069	24842187	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24842188	24842266	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24842267	24842452	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG04160_ch_T0000613:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24842453	24842495	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG04160_ch_T0000613;gene_id=HG04160_ch_G0000225;Parent=HG04160_ch_T0000613;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG04160_ch_T0000613:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24903090	24919512	.	+	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=HG04160_ch_G0000226;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG04160_ch_G0000226;Name=SEPTIN14P23
HG04160_chrY	CAT	transcript	24903090	24919512	1000	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_G0000226;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG04160_ch_T0000614;Name=SEPTIN14P23
HG04160_chrY	CAT	exon	24903090	24903183	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_T0000614;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000614:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24903184	24910725	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_T0000614;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG04160_ch_T0000614:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24910726	24910894	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_T0000614;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000614:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24910895	24918933	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_T0000614;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG04160_ch_T0000614:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24918934	24919512	.	+	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000614;gene_id=HG04160_ch_G0000226;Parent=HG04160_ch_T0000614;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000614:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24938366	24949353	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=HG04160_ch_G0000227;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG04160_ch_G0000227;Name=LOC107987240
HG04160_chrY	CAT	transcript	24938366	24949353	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_G0000227;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG04160_ch_T0000615;Name=LOC107987240
HG04160_chrY	CAT	exon	24938366	24939023	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_T0000615;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000615:0;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24939024	24939232	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_T0000615;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG04160_ch_T0000615:0;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24939233	24939339	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_T0000615;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000615:1;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24939340	24949121	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_T0000615;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG04160_ch_T0000615:1;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24949122	24949353	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG04160_ch_T0000615;gene_id=HG04160_ch_G0000227;Parent=HG04160_ch_T0000615;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000615:2;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	24957234	24958867	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=HG04160_ch_G0000228;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG04160_ch_G0000228;Name=LOC101928626
HG04160_chrY	CAT	transcript	24957234	24958867	1000	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_G0000228;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG04160_ch_T0000616;Name=LOC101928626
HG04160_chrY	CAT	exon	24957234	24957324	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_T0000616;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000616:0;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24957325	24958019	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_T0000616;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG04160_ch_T0000616:0;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24958020	24958286	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_T0000616;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000616:1;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	24958287	24958423	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_T0000616;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG04160_ch_T0000616:1;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	24958424	24958867	.	+	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG04160_ch_T0000616;gene_id=HG04160_ch_G0000228;Parent=HG04160_ch_T0000616;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000616:2;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25047658	25060763	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.1;gene_id=HG04160_ch_G0000229;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG04160_ch_G0000229;Name=LOC107987350
HG04160_chrY	CAT	transcript	25047658	25060763	1000	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_G0000229;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG04160_ch_T0000617;Name=LOC107987350
HG04160_chrY	CAT	exon	25047658	25048113	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000617;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000617:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25048114	25054083	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000617;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000617:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25054084	25056248	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000617;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000617:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25056249	25056889	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000617;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000617:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25056890	25060763	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG04160_ch_T0000617;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000617;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000617:2;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25047658	25060763	1000	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_G0000229;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG04160_ch_T0000618;Name=LOC107987350
HG04160_chrY	CAT	exon	25047658	25048113	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000618;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000618:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25048114	25053615	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000618;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000618:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25053616	25056248	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000618;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000618:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25056249	25056889	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000618;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000618:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25056890	25060763	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG04160_ch_T0000618;gene_id=HG04160_ch_G0000229;Parent=HG04160_ch_T0000618;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000618:2;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25113036	25114166	.	+	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=HG04160_ch_G0000230;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG04160_ch_G0000230;Name=TTTY17B
HG04160_chrY	CAT	transcript	25113036	25114166	1000	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG04160_ch_T0000619;gene_id=HG04160_ch_G0000230;Parent=HG04160_ch_G0000230;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG04160_ch_T0000619;Name=TTTY17B
HG04160_chrY	CAT	exon	25113036	25113095	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG04160_ch_T0000619;gene_id=HG04160_ch_G0000230;Parent=HG04160_ch_T0000619;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG04160_ch_T0000619:0;Name=TTTY17B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25113096	25114060	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG04160_ch_T0000619;gene_id=HG04160_ch_G0000230;Parent=HG04160_ch_T0000619;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG04160_ch_T0000619:0;Name=TTTY17B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25114061	25114166	.	+	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG04160_ch_T0000619;gene_id=HG04160_ch_G0000230;Parent=HG04160_ch_T0000619;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG04160_ch_T0000619:1;Name=TTTY17B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25197916	25234725	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=HG04160_ch_G0000231;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG04160_ch_G0000231;Name=TTTY4B
HG04160_chrY	CAT	transcript	25197916	25234725	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_G0000231;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG04160_ch_T0000620;Name=TTTY4B
HG04160_chrY	CAT	exon	25197916	25198076	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG04160_ch_T0000620:0;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25198077	25225086	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG04160_ch_T0000620:0;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25225087	25225162	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG04160_ch_T0000620:1;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25225163	25226966	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG04160_ch_T0000620:1;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25226967	25227074	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG04160_ch_T0000620:2;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25227075	25233724	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG04160_ch_T0000620:2;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25233725	25234725	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG04160_ch_T0000620;gene_id=HG04160_ch_G0000231;Parent=HG04160_ch_T0000620;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG04160_ch_T0000620:3;Name=TTTY4B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25245704	25266907	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=HG04160_ch_G0000232;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG04160_ch_G0000232;Name=BPY2
HG04160_chrY	CAT	transcript	25245704	25266907	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_G0000232;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG04160_ch_T0000621;Name=BPY2
HG04160_chrY	CAT	exon	25245704	25245734	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:0;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25245735	25246009	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:0;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25246010	25246132	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:1;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25246133	25249197	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:1;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25249198	25249334	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:2;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25249335	25253743	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:2;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25253744	25253862	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:3;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25253785	25253862	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG04160_ch_T0000621:0;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25253785	25253787	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG04160_ch_T0000621;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25253863	25255921	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:3;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25255922	25256039	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:4;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25255922	25256039	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG04160_ch_T0000621:1;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25256040	25258893	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:4;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25258894	25258999	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:5;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25258894	25258999	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG04160_ch_T0000621:2;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25259000	25259691	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:5;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25259692	25259816	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:6;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25259692	25259710	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG04160_ch_T0000621:3;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25259708	25259710	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG04160_ch_T0000621;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25259817	25266366	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:6;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25266367	25266491	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:7;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25266492	25266585	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG04160_ch_T0000621:7;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25266586	25266907	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG04160_ch_T0000621;gene_id=HG04160_ch_G0000232;Parent=HG04160_ch_T0000621;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG04160_ch_T0000621:8;Name=BPY2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25367807	25371148	.	-	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=HG04160_ch_G0000233;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG04160_ch_G0000233;Name=LOC105377238
HG04160_chrY	CAT	transcript	25367807	25371148	1000	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_G0000233;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG04160_ch_T0000622;Name=LOC105377238
HG04160_chrY	CAT	exon	25367807	25367907	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000622;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000622:0;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25367908	25370238	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000622;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG04160_ch_T0000622:0;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25370239	25370303	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000622;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000622:1;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25370304	25370965	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000622;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG04160_ch_T0000622:1;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25370966	25371148	.	-	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000622;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000622;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000622:2;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25367807	25371148	1000	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_G0000233;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG04160_ch_T0000623;Name=LOC105377238
HG04160_chrY	CAT	exon	25367807	25367907	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000623;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000623:0;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25367908	25370265	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000623;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG04160_ch_T0000623:0;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25370266	25370303	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000623;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000623:1;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25370304	25370965	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000623;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG04160_ch_T0000623:1;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25370966	25371148	.	-	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG04160_ch_T0000623;gene_id=HG04160_ch_G0000233;Parent=HG04160_ch_T0000623;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG04160_ch_T0000623:2;Name=LOC105377238;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25390760	25452053	.	-	.	source_gene_common_name=DAZ1;source_gene=hg002_chrY_paternal_600;gene_id=HG04160_ch_G0000234;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=HG04160_ch_G0000234;Name=DAZ1
HG04160_chrY	CAT	transcript	25390760	25452053	100	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_G0000234;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=HG04160_ch_T0000624;Name=DAZ1
HG04160_chrY	CAT	exon	25390760	25392616	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25392617	25396589	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25396590	25396688	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25396625	25396688	.	-	1	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25396625	25396627	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=stop_codon:HG04160_ch_T0000624;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25396689	25401260	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25401261	25401295	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25401261	25401295	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25401296	25402040	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25402041	25402112	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25402041	25402112	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25402113	25423751	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25423752	25423823	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25423752	25423823	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25423824	25426147	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25426148	25426219	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25426148	25426219	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25426220	25428537	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25428538	25428609	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25428538	25428609	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25428610	25430980	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25430981	25431052	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25430981	25431052	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25431053	25451756	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000624:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25451757	25452053	.	-	.	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000624:8;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25451757	25451759	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000624:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25451757	25451759	.	-	0	source_transcript=hg002_chrY_paternal_600.2;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000624;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000624;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=start_codon:HG04160_ch_T0000624;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25390760	25451967	100	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_G0000234;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=HG04160_ch_T0000625;Name=DAZ1
HG04160_chrY	CAT	exon	25390760	25392616	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25392617	25396589	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25396590	25396688	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25396625	25396688	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:0;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25396625	25396627	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=stop_codon:HG04160_ch_T0000625;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25396689	25401260	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25401261	25401295	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25401261	25401295	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:1;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25401296	25402040	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25402041	25402112	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25402041	25402112	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:2;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25402113	25404424	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25404425	25404496	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25404425	25404496	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:3;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25404497	25423751	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25423752	25423823	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25423752	25423823	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:4;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25423824	25426147	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25426148	25426219	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25426148	25426219	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:5;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25426220	25428537	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25428538	25428609	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25428538	25428609	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:6;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25428610	25430980	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25430981	25431052	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:8;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25430981	25431052	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:7;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25431053	25432452	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:8;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25432453	25432592	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:9;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25432453	25432592	.	-	2	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:8;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25432593	25432681	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:9;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25432682	25432745	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:10;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25432682	25432745	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:9;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25432746	25433181	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:10;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25433182	25433233	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:11;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25433182	25433233	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:10;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25433234	25433793	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:11;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25433794	25433885	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:12;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25433794	25433885	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:11;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25433886	25434159	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:12;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25434160	25434306	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:13;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25434160	25434306	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:12;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25434307	25443301	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:13;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25443302	25443441	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:14;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25443302	25443441	.	-	2	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:13;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25443442	25443530	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:14;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25443531	25443594	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:15;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25443531	25443594	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:14;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25443595	25444030	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:15;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25444031	25444082	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:16;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25444031	25444082	.	-	1	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:15;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25444083	25444642	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:16;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25444643	25444734	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:17;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25444643	25444734	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:16;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25444735	25445008	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:17;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25445009	25445155	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:18;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25445009	25445155	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:17;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25445156	25451756	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=intron:HG04160_ch_T0000625:18;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25451757	25451967	.	-	.	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=exon:HG04160_ch_T0000625:19;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25451757	25451759	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=CDS:HG04160_ch_T0000625:18;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25451757	25451759	.	-	0	source_transcript=hg002_chrY_paternal_600.1;source_transcript_name=hg002_chrY_paternal_600.2;source_gene=hg002_chrY_paternal_600;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_600;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_600.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_600.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG04160_ch_T0000625;gene_id=HG04160_ch_G0000234;Parent=HG04160_ch_T0000625;transcript_name=hg002_chrY_paternal_600.2;gene_name=DAZ1;ID=start_codon:HG04160_ch_T0000625;Name=DAZ1;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25472417	25522830	.	+	.	source_gene_common_name=DAZ2;source_gene=hg002_chrY_paternal_601;alternative_source_transcripts=hg002_chrY_paternal_601.2;gene_id=HG04160_ch_G0000235;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=HG04160_ch_G0000235;Name=DAZ2
HG04160_chrY	CAT	transcript	25472417	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000626;Name=DAZ2
HG04160_chrY	CAT	exon	25472417	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000626;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479304	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479305	25479451	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479305	25479451	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479452	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000626:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000626;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000626:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.2;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.2;transcript_id=HG04160_ch_T0000626;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000626;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000626:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25472417	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000627;Name=DAZ2
HG04160_chrY	CAT	exon	25472417	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000627;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479304	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479305	25479451	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479305	25479451	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479452	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25487391	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25487392	25487463	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25487392	25487463	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25487464	25489787	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25489788	25489859	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25489788	25489859	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25489860	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000627:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000627;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000627:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.1;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.1;transcript_id=HG04160_ch_T0000627;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000627;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000627:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25472417	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000628;Name=DAZ2
HG04160_chrY	CAT	exon	25472417	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000628;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479304	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479305	25479451	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479305	25479451	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479452	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25487391	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25487392	25487463	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25487392	25487463	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25487464	25489787	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25489788	25489859	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25489788	25489859	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25489860	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25501701	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25501702	25501773	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25501702	25501773	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25501774	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000628:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000628;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000628:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.3;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.3;transcript_id=HG04160_ch_T0000628;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000628;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000628:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25472493	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000629;Name=DAZ2
HG04160_chrY	CAT	exon	25472493	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000629;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479304	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479305	25479451	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479305	25479451	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479452	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25487391	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25487392	25487463	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25487392	25487463	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25487464	25489787	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25489788	25489859	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25489788	25489859	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25489860	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25501701	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25501702	25501773	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25501702	25501773	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25501774	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000629:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000629;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000629:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.4;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.4;transcript_id=HG04160_ch_T0000629;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000629;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000629:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25472493	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000630;Name=DAZ2
HG04160_chrY	CAT	exon	25472493	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000630;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479304	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479305	25479451	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479305	25479451	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479452	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25487391	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25487392	25487463	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25487392	25487463	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25487464	25489787	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25489788	25489859	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25489788	25489859	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25489860	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25499324	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25499325	25499396	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25499325	25499396	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25499397	25501701	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25501702	25501773	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25501702	25501773	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25501774	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000630;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000630:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.5;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.5,hg002_chrY_paternal_601.7,hg002_chrY_paternal_601.7;transcript_id=HG04160_ch_T0000630;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000630;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000630:16;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25472493	25522830	100	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_G0000235;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=HG04160_ch_T0000631;Name=DAZ2
HG04160_chrY	CAT	exon	25472493	25472703	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25472701	25472703	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=start_codon:HG04160_ch_T0000631;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25472704	25479725	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:0;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25479726	25479817	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25479726	25479817	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25479818	25480377	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:1;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480378	25480429	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480378	25480429	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480430	25480865	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:2;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25480866	25480929	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25480866	25480929	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25480930	25481018	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:3;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25481019	25481158	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25481019	25481158	.	+	2	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25481159	25482558	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:4;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25482559	25482630	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25482559	25482630	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25482631	25485001	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:5;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25485002	25485073	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25485002	25485073	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25485074	25487391	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:6;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25487392	25487463	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25487392	25487463	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25487464	25489787	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:7;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25489788	25489859	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25489788	25489859	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25489860	25492171	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:8;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25492172	25492243	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25492172	25492243	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25492244	25499324	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:9;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25499325	25499396	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25499325	25499396	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25499397	25501701	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:10;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25501702	25501773	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25501702	25501773	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25501774	25511488	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:11;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25511489	25511560	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25511489	25511560	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25511561	25512305	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:12;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25512306	25512340	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25512306	25512340	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25512341	25516912	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:13;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25516913	25517011	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25516913	25516976	.	+	1	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=CDS:HG04160_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25516974	25516976	.	+	0	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=stop_codon:HG04160_ch_T0000631;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25517012	25520973	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=intron:HG04160_ch_T0000631:14;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25520974	25522830	.	+	.	source_transcript=hg002_chrY_paternal_601.6;source_transcript_name=hg002_chrY_paternal_601.7;source_gene=hg002_chrY_paternal_601;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_601;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_601.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_601.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;alternative_source_transcripts=hg002_chrY_paternal_601.6;transcript_id=HG04160_ch_T0000631;gene_id=HG04160_ch_G0000235;Parent=HG04160_ch_T0000631;transcript_name=hg002_chrY_paternal_601.7;gene_name=DAZ2;ID=exon:HG04160_ch_T0000631:15;Name=DAZ2;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25542443	25545784	.	+	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=HG04160_ch_G0000236;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG04160_ch_G0000236;Name=LOC105377241
HG04160_chrY	CAT	transcript	25542443	25545784	1000	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_G0000236;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG04160_ch_T0000632;Name=LOC105377241
HG04160_chrY	CAT	exon	25542443	25542625	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000632:0;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25542626	25543287	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG04160_ch_T0000632:0;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25543288	25543325	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000632:1;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25543326	25545683	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG04160_ch_T0000632:1;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25545684	25545784	.	+	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000632;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000632;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000632:2;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25542443	25545784	1000	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_G0000236;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG04160_ch_T0000633;Name=LOC105377241
HG04160_chrY	CAT	exon	25542443	25542625	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000633:0;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25542626	25543287	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG04160_ch_T0000633:0;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25543288	25543352	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000633:1;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25543353	25545683	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG04160_ch_T0000633:1;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25545684	25545784	.	+	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG04160_ch_T0000633;gene_id=HG04160_ch_G0000236;Parent=HG04160_ch_T0000633;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG04160_ch_T0000633:2;Name=LOC105377241;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25646650	25667853	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;gene_id=HG04160_ch_G0000237;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG04160_ch_G0000237;Name=BPY2C
HG04160_chrY	CAT	transcript	25646650	25667853	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_G0000237;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG04160_ch_T0000634;Name=BPY2C
HG04160_chrY	CAT	exon	25646650	25646971	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:0;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25646972	25647065	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:0;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25647066	25647190	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:1;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25647191	25653740	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:1;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25653741	25653865	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:2;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25653847	25653865	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG04160_ch_T0000634:0;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	25653847	25653849	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG04160_ch_T0000634;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25653866	25654557	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:2;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25654558	25654663	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:3;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25654558	25654663	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG04160_ch_T0000634:1;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25654664	25657517	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:3;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25657518	25657635	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:4;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25657518	25657635	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG04160_ch_T0000634:2;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25657636	25659694	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:4;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25659695	25659813	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:5;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	25659695	25659772	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG04160_ch_T0000634:3;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	25659770	25659772	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG04160_ch_T0000634;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25659814	25664222	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:5;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25664223	25664359	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:6;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25664360	25667424	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:6;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25667425	25667547	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:7;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25667548	25667822	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG04160_ch_T0000634:7;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25667823	25667853	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG04160_ch_T0000634;gene_id=HG04160_ch_G0000237;Parent=HG04160_ch_T0000634;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG04160_ch_T0000634:8;Name=BPY2C;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25678832	25715643	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;alternative_source_transcripts=hg002_chrY_paternal_608.1;gene_id=HG04160_ch_G0000238;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG04160_ch_G0000238;Name=TTTY4
HG04160_chrY	CAT	transcript	25678832	25715643	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_G0000238;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG04160_ch_T0000635;Name=TTTY4
HG04160_chrY	CAT	exon	25678832	25679832	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG04160_ch_T0000635:0;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25679833	25686482	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG04160_ch_T0000635:0;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25686483	25686590	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG04160_ch_T0000635:1;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25686591	25688394	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG04160_ch_T0000635:1;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25688395	25688470	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG04160_ch_T0000635:2;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25688471	25715482	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG04160_ch_T0000635:2;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25715483	25715643	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=hg002_chrY_paternal_608.1;transcript_id=HG04160_ch_T0000635;gene_id=HG04160_ch_G0000238;Parent=HG04160_ch_T0000635;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG04160_ch_T0000635:3;Name=TTTY4;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25799390	25800521	.	-	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;gene_id=HG04160_ch_G0000239;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG04160_ch_G0000239;Name=TTTY17C
HG04160_chrY	CAT	transcript	25799390	25800521	1000	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG04160_ch_T0000636;gene_id=HG04160_ch_G0000239;Parent=HG04160_ch_G0000239;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG04160_ch_T0000636;Name=TTTY17C
HG04160_chrY	CAT	exon	25799390	25799495	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG04160_ch_T0000636;gene_id=HG04160_ch_G0000239;Parent=HG04160_ch_T0000636;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG04160_ch_T0000636:0;Name=TTTY17C;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25799496	25800461	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG04160_ch_T0000636;gene_id=HG04160_ch_G0000239;Parent=HG04160_ch_T0000636;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG04160_ch_T0000636:0;Name=TTTY17C;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25800462	25800521	.	-	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG04160_ch_T0000636;gene_id=HG04160_ch_G0000239;Parent=HG04160_ch_T0000636;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG04160_ch_T0000636:1;Name=TTTY17C;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25852783	25865888	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.1;gene_id=HG04160_ch_G0000240;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG04160_ch_G0000240;Name=LOC107987350
HG04160_chrY	CAT	transcript	25852783	25865888	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_G0000240;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG04160_ch_T0000637;Name=LOC107987350
HG04160_chrY	CAT	exon	25852783	25856656	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000637;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000637:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25856657	25857297	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000637;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000637:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25857298	25859462	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000637;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000637:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25859463	25865432	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000637;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000637:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25865433	25865888	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG04160_ch_T0000637;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000637;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000637:2;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	25852783	25865888	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_G0000240;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG04160_ch_T0000638;Name=LOC107987350
HG04160_chrY	CAT	exon	25852783	25856656	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000638;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000638:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25856657	25857297	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000638;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000638:0;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25857298	25859930	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000638;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000638:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25859931	25865432	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000638;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG04160_ch_T0000638:1;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25865433	25865888	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG04160_ch_T0000638;gene_id=HG04160_ch_G0000240;Parent=HG04160_ch_T0000638;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG04160_ch_T0000638:2;Name=LOC107987350;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25954661	25956294	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=HG04160_ch_G0000241;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG04160_ch_G0000241;Name=LOC101928626
HG04160_chrY	CAT	transcript	25954661	25956294	1000	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_G0000241;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG04160_ch_T0000639;Name=LOC101928626
HG04160_chrY	CAT	exon	25954661	25955104	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_T0000639;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000639:0;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25955105	25955241	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_T0000639;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG04160_ch_T0000639:0;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25955242	25955508	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_T0000639;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000639:1;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25955509	25956203	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_T0000639;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG04160_ch_T0000639:1;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25956204	25956294	.	-	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG04160_ch_T0000639;gene_id=HG04160_ch_G0000241;Parent=HG04160_ch_T0000639;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG04160_ch_T0000639:2;Name=LOC101928626;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25964176	25975177	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=HG04160_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG04160_ch_G0000242;Name=LOC107987240
HG04160_chrY	CAT	transcript	25964176	25975177	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_G0000242;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG04160_ch_T0000640;Name=LOC107987240
HG04160_chrY	CAT	exon	25964176	25964407	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_T0000640;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000640:0;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25964408	25974203	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_T0000640;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG04160_ch_T0000640:0;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25974204	25974310	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_T0000640;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000640:1;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25974311	25974519	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_T0000640;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG04160_ch_T0000640:1;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	25974520	25975177	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG04160_ch_T0000640;gene_id=HG04160_ch_G0000242;Parent=HG04160_ch_T0000640;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG04160_ch_T0000640:2;Name=LOC107987240;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	25994041	26010461	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;gene_id=HG04160_ch_G0000243;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=transMap_pairwise;ID=HG04160_ch_G0000243;Name=SEPTIN14P23
HG04160_chrY	CAT	transcript	25994041	26010461	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_G0000243;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG04160_ch_T0000641;Name=SEPTIN14P23
HG04160_chrY	CAT	exon	25994041	25994619	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_T0000641;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000641:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	25994620	26002657	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_T0000641;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG04160_ch_T0000641:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26002658	26002826	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_T0000641;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000641:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26002827	26010367	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_T0000641;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG04160_ch_T0000641:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26010368	26010461	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG04160_ch_T0000641;gene_id=HG04160_ch_G0000243;Parent=HG04160_ch_T0000641;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG04160_ch_T0000641:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26071059	26075924	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=HG04160_ch_G0000244;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG04160_ch_G0000244;Name=GOLGA2P2Y
HG04160_chrY	CAT	transcript	26071059	26075924	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_G0000244;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG04160_ch_T0000642;Name=GOLGA2P2Y
HG04160_chrY	CAT	exon	26071059	26071101	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26071102	26071287	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26071288	26071366	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26071367	26072486	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26072487	26072838	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26072839	26073134	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26073135	26073192	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26073193	26074548	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26074549	26074623	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26074624	26075043	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26075044	26075132	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26075133	26075387	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26075388	26075576	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26075577	26075665	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26075666	26075758	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26075759	26075840	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG04160_ch_T0000642:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26075841	26075924	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG04160_ch_T0000642;gene_id=HG04160_ch_G0000244;Parent=HG04160_ch_T0000642;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG04160_ch_T0000642:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26077923	26079453	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=HG04160_ch_G0000245;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG04160_ch_G0000245;Name=LOC102724034
HG04160_chrY	CAT	transcript	26077923	26079453	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_G0000245;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG04160_ch_T0000643;Name=LOC102724034
HG04160_chrY	CAT	exon	26077923	26078346	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_T0000643;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000643:0;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26078347	26078614	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_T0000643;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG04160_ch_T0000643:0;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26078615	26078739	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_T0000643;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000643:1;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26078740	26079427	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_T0000643;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG04160_ch_T0000643:1;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26079428	26079453	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG04160_ch_T0000643;gene_id=HG04160_ch_G0000245;Parent=HG04160_ch_T0000643;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG04160_ch_T0000643:2;Name=LOC102724034;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26237862	26241261	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=HG04160_ch_G0000246;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG04160_ch_G0000246;Name=CDY1B
HG04160_chrY	CAT	transcript	26237862	26240088	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000644;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_G0000246;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG04160_ch_T0000644;Name=CDY1B
HG04160_chrY	CAT	exon	26237862	26240088	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000644;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000644;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG04160_ch_T0000644:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	26238193	26239815	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000644;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000644;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG04160_ch_T0000644:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	26238193	26238195	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000644;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000644;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG04160_ch_T0000644;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	26239813	26239815	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000644;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000644;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG04160_ch_T0000644;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	26237867	26240652	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_G0000246;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG04160_ch_T0000645;Name=CDY1B
HG04160_chrY	CAT	exon	26237867	26239784	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG04160_ch_T0000645:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	26238193	26239784	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG04160_ch_T0000645:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	26238193	26238195	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG04160_ch_T0000645;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26239785	26240204	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG04160_ch_T0000645:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26240205	26240652	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG04160_ch_T0000645:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	26240205	26240277	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG04160_ch_T0000645:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	26240275	26240277	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG04160_ch_T0000645;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000645;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG04160_ch_T0000645;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	26237867	26241261	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_G0000246;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=HG04160_ch_T0000646;Name=CDY1B
HG04160_chrY	CAT	exon	26237867	26239784	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000646;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG04160_ch_T0000646:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26239785	26240204	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000646;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG04160_ch_T0000646:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26240205	26240404	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000646;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG04160_ch_T0000646:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26240405	26241179	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000646;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG04160_ch_T0000646:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26241180	26241261	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG04160_ch_T0000646;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000646;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG04160_ch_T0000646:2;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	26237875	26240652	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_G0000246;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG04160_ch_T0000647;Name=CDY1B
HG04160_chrY	CAT	exon	26237875	26239584	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG04160_ch_T0000647:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	26238193	26239584	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG04160_ch_T0000647:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	26238193	26238195	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG04160_ch_T0000647;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26239585	26240204	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG04160_ch_T0000647:0;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26240205	26240652	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG04160_ch_T0000647:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	26240205	26240225	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG04160_ch_T0000647:1;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	26240223	26240225	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG04160_ch_T0000647;gene_id=HG04160_ch_G0000246;Parent=HG04160_ch_T0000647;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG04160_ch_T0000647;Name=CDY1B;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26344218	26349113	.	+	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=HG04160_ch_G0000247;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG04160_ch_G0000247;Name=TTTY3
HG04160_chrY	CAT	transcript	26344218	26349113	1000	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_G0000247;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG04160_ch_T0000648;Name=TTTY3
HG04160_chrY	CAT	exon	26344218	26344321	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_T0000648;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG04160_ch_T0000648:0;Name=TTTY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26344322	26346519	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_T0000648;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG04160_ch_T0000648:0;Name=TTTY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26346520	26346654	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_T0000648;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG04160_ch_T0000648:1;Name=TTTY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26346655	26349008	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_T0000648;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG04160_ch_T0000648:1;Name=TTTY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26349009	26349113	.	+	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG04160_ch_T0000648;gene_id=HG04160_ch_G0000247;Parent=HG04160_ch_T0000648;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG04160_ch_T0000648:2;Name=TTTY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26645069	26648193	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=HG04160_ch_G0000248;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG04160_ch_G0000248;Name=LOC107987352
HG04160_chrY	CAT	transcript	26645069	26648193	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_G0000248;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG04160_ch_T0000649;Name=LOC107987352
HG04160_chrY	CAT	exon	26645069	26646397	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_T0000649;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG04160_ch_T0000649:0;Name=LOC107987352;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26646398	26647932	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_T0000649;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG04160_ch_T0000649:0;Name=LOC107987352;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26647933	26647993	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_T0000649;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG04160_ch_T0000649:1;Name=LOC107987352;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26647994	26648110	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_T0000649;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG04160_ch_T0000649:1;Name=LOC107987352;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26648111	26648193	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG04160_ch_T0000649;gene_id=HG04160_ch_G0000248;Parent=HG04160_ch_T0000649;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG04160_ch_T0000649:2;Name=LOC107987352;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26809632	26851139	.	-	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=HG04160_ch_G0000249;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG04160_ch_G0000249;Name=REREP1Y
HG04160_chrY	CAT	transcript	26809632	26851139	1000	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_G0000249;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG04160_ch_T0000650;Name=REREP1Y
HG04160_chrY	CAT	exon	26809632	26814221	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_T0000650;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG04160_ch_T0000650:0;Name=REREP1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26814222	26823841	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_T0000650;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG04160_ch_T0000650:0;Name=REREP1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26823842	26823914	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_T0000650;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG04160_ch_T0000650:1;Name=REREP1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	26823915	26850736	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_T0000650;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG04160_ch_T0000650:1;Name=REREP1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	26850737	26851139	.	-	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG04160_ch_T0000650;gene_id=HG04160_ch_G0000249;Parent=HG04160_ch_T0000650;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG04160_ch_T0000650:2;Name=REREP1Y;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	26863149	26863286	.	+	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=HG04160_ch_G0000250;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG04160_ch_G0000250;Name=LOC124900506
HG04160_chrY	CAT	transcript	26863149	26863286	1000	+	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG04160_ch_T0000651;gene_id=HG04160_ch_G0000250;Parent=HG04160_ch_G0000250;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG04160_ch_T0000651;Name=LOC124900506
HG04160_chrY	CAT	exon	26863149	26863286	.	+	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG04160_ch_T0000651;gene_id=HG04160_ch_G0000250;Parent=HG04160_ch_T0000651;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG04160_ch_T0000651:0;Name=LOC124900506;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	27016910	27024904	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=HG04160_ch_G0000251;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG04160_ch_G0000251;Name=LOC105377244
HG04160_chrY	CAT	transcript	27016910	27024904	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_G0000251;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG04160_ch_T0000652;Name=LOC105377244
HG04160_chrY	CAT	exon	27016910	27021512	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_T0000652;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG04160_ch_T0000652:0;Name=LOC105377244;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	27021513	27022378	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_T0000652;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG04160_ch_T0000652:0;Name=LOC105377244;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	27022379	27022545	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_T0000652;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG04160_ch_T0000652:1;Name=LOC105377244;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	27022546	27024673	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_T0000652;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG04160_ch_T0000652:1;Name=LOC105377244;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	27024674	27024904	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG04160_ch_T0000652;gene_id=HG04160_ch_G0000251;Parent=HG04160_ch_T0000652;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG04160_ch_T0000652:2;Name=LOC105377244;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	27040396	27056571	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=HG04160_ch_G0000252;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG04160_ch_G0000252;Name=LOC102723869
HG04160_chrY	CAT	transcript	27040396	27056571	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_G0000252;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG04160_ch_T0000653;Name=LOC102723869
HG04160_chrY	CAT	exon	27040396	27040663	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG04160_ch_T0000653:0;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	27040664	27052701	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG04160_ch_T0000653:0;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	27052702	27052730	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG04160_ch_T0000653:1;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	27052731	27052824	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG04160_ch_T0000653:1;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	27052825	27052897	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG04160_ch_T0000653:2;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	27052898	27056540	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG04160_ch_T0000653:2;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	27056541	27056571	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG04160_ch_T0000653;gene_id=HG04160_ch_G0000252;Parent=HG04160_ch_T0000653;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG04160_ch_T0000653:3;Name=LOC102723869;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	50546468	50561179	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG04160_ch_G0000253;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000253;Name=SPRY3
HG04160_chrY	CAT	transcript	50546468	50561179	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_G0000253;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG04160_ch_T0000654;Name=SPRY3
HG04160_chrY	CAT	exon	50546468	50546808	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG04160_ch_T0000654:0;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50546809	50552441	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG04160_ch_T0000654:0;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50552442	50561179	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG04160_ch_T0000654:1;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50552548	50553414	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG04160_ch_T0000654:0;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50552548	50552550	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG04160_ch_T0000654;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50553412	50553414	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000654;gene_id=HG04160_ch_G0000253;Parent=HG04160_ch_T0000654;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG04160_ch_T0000654;Name=SPRY3;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	50662743	50725180	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG04160_ch_G0000254;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000254;Name=VAMP7
HG04160_chrY	CAT	transcript	50662743	50725180	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG04160_ch_T0000655;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50670947	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50670867	50670947	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50670867	50670869	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG04160_ch_T0000655;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50670948	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50679512	50679649	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50681897	50681987	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50701215	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50701216	50701283	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50701216	50701283	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50701284	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50721113	50721205	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000655:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000655:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50723294	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000655:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50723360	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000655;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000655;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG04160_ch_T0000655;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG04160_ch_T0000656;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50671012	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50670867	50671012	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50670867	50670869	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG04160_ch_T0000656;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50671013	50677022	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50677023	50677080	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50677023	50677080	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50677081	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50679512	50679649	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50681897	50681987	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50721113	50721205	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000656:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000656:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50723294	50723550	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000656:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50723548	50723550	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000656;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000656;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG04160_ch_T0000656;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG04160_ch_T0000657;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50671012	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50670867	50671012	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50670867	50670869	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG04160_ch_T0000657;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50671013	50677022	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50677023	50677080	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50677023	50677080	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50677081	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50679512	50679649	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50681897	50681987	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50701215	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50701216	50701283	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50701216	50701283	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50701284	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50721113	50721205	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000657:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000657:7;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50723294	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000657:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50723360	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000657;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000657;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG04160_ch_T0000657;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG04160_ch_T0000658;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50671033	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50671029	50671033	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50671029	50671031	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG04160_ch_T0000658;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50671034	50677022	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50677023	50677080	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50677023	50677080	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50677081	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50679512	50679649	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50681897	50681987	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50721113	50721205	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000658:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000658:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50723294	50723550	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000658:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50723548	50723550	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000658;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000658;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG04160_ch_T0000658;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG04160_ch_T0000659;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50671033	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50671029	50671033	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50671029	50671031	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG04160_ch_T0000659;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50671034	50677022	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50677023	50677080	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50677023	50677080	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50677081	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50679512	50679649	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50681897	50681987	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50701215	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50701216	50701283	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50701216	50701283	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50701284	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50721113	50721205	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG04160_ch_T0000659:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG04160_ch_T0000659:7;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50723294	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG04160_ch_T0000659:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50723360	50723362	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000659;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000659;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG04160_ch_T0000659;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG04160_ch_T0000660;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50671012	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50671013	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50701215	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50701216	50701283	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50701284	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000660:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000660;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000660;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000660:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50662743	50725180	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_G0000254;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG04160_ch_T0000661;Name=VAMP7
HG04160_chrY	CAT	exon	50662743	50662846	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50662847	50670857	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:0;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50670858	50670947	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50670948	50677022	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:1;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50677023	50677080	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50677081	50679511	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:2;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50679512	50679649	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50679650	50681896	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:3;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50681897	50681987	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50681988	50701215	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:4;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50701216	50701283	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50701284	50721112	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:5;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50721113	50721205	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50721206	50723293	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG04160_ch_T0000661:6;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50723294	50725180	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000661;gene_id=HG04160_ch_G0000254;Parent=HG04160_ch_T0000661;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG04160_ch_T0000661:7;Name=VAMP7;rna_support=False;reference_support=False
HG04160_chrY	CAT	gene	50778963	50792227	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;gene_id=HG04160_ch_G0000255;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000255;Name=IL9R
HG04160_chrY	CAT	transcript	50778963	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000662;Name=IL9R
HG04160_chrY	CAT	exon	50778963	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000662;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784320	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784321	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784321	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786695	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786696	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786696	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000662:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000662:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791262	.	+	1	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000662:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791260	50791262	.	+	0	source_transcript=hg002_chrY_paternal_691.1;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.1,hg002_chrY_paternal_691.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000662;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000662;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000662;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779020	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000663;Name=IL9R
HG04160_chrY	CAT	exon	50779020	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000663;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50789313	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50789314	50789546	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50789314	50789546	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789547	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000663:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000663:10;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791262	.	+	1	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000663:10;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791260	50791262	.	+	0	source_transcript=hg002_chrY_paternal_691.2;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.2,hg002_chrY_paternal_691.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000663;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000663;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000663;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779020	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000664;Name=IL9R
HG04160_chrY	CAT	exon	50779020	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000664;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000664:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000664:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791262	.	+	1	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000664:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791260	50791262	.	+	0	source_transcript=hg002_chrY_paternal_691.3;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.3,hg002_chrY_paternal_691.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000664;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000664;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000664;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779020	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000665;Name=IL9R
HG04160_chrY	CAT	exon	50779020	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000665;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786695	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786696	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786696	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50789313	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50789314	50789546	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50789314	50789546	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789547	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000665:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000665:10;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791262	.	+	1	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000665:10;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791260	50791262	.	+	0	source_transcript=hg002_chrY_paternal_691.4;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.4,hg002_chrY_paternal_691.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000665;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000665;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000665;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779020	50792759	100	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000666;Name=IL9R
HG04160_chrY	CAT	exon	50779020	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000666;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784320	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784321	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784321	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50789313	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000666:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50789314	50792759	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000666:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50789314	50789550	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000666:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50789548	50789550	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.5,hg002_chrY_paternal_691.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000666;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000666;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000666;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779026	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000667;Name=IL9R
HG04160_chrY	CAT	exon	50779026	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000667;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786695	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786696	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786696	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000667:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000667:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000667:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.6;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.6,hg002_chrY_paternal_691.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000667;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000667;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000667;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779028	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000668;Name=IL9R
HG04160_chrY	CAT	exon	50779028	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000668;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000668:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000668:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000668:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.7;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.7,hg002_chrY_paternal_691.7;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000668;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000668;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000668;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779028	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000669;Name=IL9R
HG04160_chrY	CAT	exon	50779028	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000669;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784320	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784321	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784321	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000669:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000669:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000669:9;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.8;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.8,hg002_chrY_paternal_691.8;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000669;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000669;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000669;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779030	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000670;Name=IL9R
HG04160_chrY	CAT	exon	50779030	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782740	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782741	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784284	50784434	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50784284	50784286	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000670;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000670:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000670:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.9;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.9,hg002_chrY_paternal_691.9;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000670;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000670;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000670;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779033	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000671;Name=IL9R
HG04160_chrY	CAT	exon	50779033	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779171	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779171	50779173	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000671;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000671:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000671:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000671:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000671:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000671:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000671:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000671:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.10;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.10,hg002_chrY_paternal_691.10;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000671;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000671;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000671;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779107	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000672;Name=IL9R
HG04160_chrY	CAT	exon	50779107	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779171	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779171	50779173	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000672;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50784320	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784321	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784321	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785091	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785092	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785092	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785834	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785835	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785835	50785980	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000672:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000672:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000672:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.11;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.11,hg002_chrY_paternal_691.11;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000672;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000672;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000672;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50779107	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000673;Name=IL9R
HG04160_chrY	CAT	exon	50779107	50779198	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50779155	50779198	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50779155	50779157	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000673;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50779199	50782818	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50782819	50782919	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50782819	50782919	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50782920	50784296	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784297	50784434	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784297	50784434	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784435	50784863	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50784864	50784975	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50784864	50784975	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50784976	50785098	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:3;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785099	50785270	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785099	50785270	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785271	50785863	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:4;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50785864	50785980	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50785864	50785980	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50785981	50786692	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:5;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50786693	50786894	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50786693	50786894	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50786895	50787497	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:6;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50787498	50787603	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787498	50787603	.	+	2	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787604	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000673:7;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000673:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791262	.	+	1	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000673:8;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791260	50791262	.	+	0	source_transcript=hg002_chrY_paternal_691.12;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.12,hg002_chrY_paternal_691.12;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000673;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000673;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000673;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	transcript	50787220	50792227	100	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_G0000255;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG04160_ch_T0000674;Name=IL9R
HG04160_chrY	CAT	exon	50787220	50787432	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50787248	50787432	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	start_codon	50787248	50787250	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG04160_ch_T0000674;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50787433	50788938	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000674:0;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50788939	50789023	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50788939	50789023	.	+	1	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	intron	50789024	50791225	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG04160_ch_T0000674:1;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	exon	50791226	50792227	.	+	.	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG04160_ch_T0000674:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	CDS	50791226	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG04160_ch_T0000674:2;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY	CAT	stop_codon	50791817	50791819	.	+	0	source_transcript=hg002_chrY_paternal_691.13;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_691.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=hg002_chrY_paternal_691.13,hg002_chrY_paternal_691.13;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000674;gene_id=HG04160_ch_G0000255;Parent=HG04160_ch_T0000674;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG04160_ch_T0000674;Name=IL9R;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	15635	49446	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;gene_id=HG04160_ch_G0000256;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=HG04160_ch_G0000256;Name=LOC124905304
HG04160_chrY_random0000188	CAT	transcript	15635	49446	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_G0000256;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=HG04160_ch_T0000675;Name=LOC124905304
HG04160_chrY_random0000188	CAT	exon	15635	15675	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:0;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	15676	18076	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:0;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	18077	18239	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:1;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	18240	18897	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:1;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	18898	18999	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:2;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	19000	21361	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:2;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	21362	21565	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:3;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	21566	23281	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:3;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	23282	23416	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:4;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	23417	32212	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:4;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	32213	32445	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:5;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	32446	32538	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:5;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	32539	32644	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:6;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	32645	38245	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:6;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	38246	38373	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:7;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	38374	47138	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG04160_ch_T0000675:7;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	47139	49446	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;transcript_id=HG04160_ch_T0000675;gene_id=HG04160_ch_G0000256;Parent=HG04160_ch_T0000675;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG04160_ch_T0000675:8;Name=LOC124905304;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	61223	120557	.	+	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;gene_id=HG04160_ch_G0000257;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000257;Name=HSFY2
HG04160_chrY_random0000188	CAT	transcript	61223	80173	100	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG04160_ch_T0000676;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	61223	61417	.	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000676:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	61392	61417	.	+	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000676:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	61392	61394	.	+	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG04160_ch_T0000676;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	61418	78613	.	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000676:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	78614	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000676:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78614	78881	.	+	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000676:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	79359	.	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000676:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	79360	80173	.	+	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000676:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	79360	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000676:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	80050	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000676;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000676;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG04160_ch_T0000676;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	78252	120557	100	+	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG04160_ch_T0000677;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	78252	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000677:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78369	78881	.	+	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000677:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	78369	78371	.	+	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG04160_ch_T0000677;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	120129	.	+	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000677:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	120130	120557	.	+	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000677:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	120130	120228	.	+	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000677:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	120226	120228	.	+	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000677;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000677;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG04160_ch_T0000677;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	78252	82479	100	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG04160_ch_T0000678;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	78252	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000678:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78369	78881	.	+	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000678:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	78369	78371	.	+	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG04160_ch_T0000678;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	81694	.	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000678:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	81695	81804	.	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000678:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	81695	81804	.	+	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000678:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	81805	82367	.	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000678:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	82368	82479	.	+	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000678:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	82368	82389	.	+	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000678:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	82387	82389	.	+	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000678;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000678;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG04160_ch_T0000678;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	78252	80173	100	+	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG04160_ch_T0000679;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	78252	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000679:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78369	78881	.	+	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000679:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	78369	78371	.	+	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG04160_ch_T0000679;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	79359	.	+	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000679:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	79360	80173	.	+	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000679:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	79360	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000679:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	80050	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000679;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000679;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG04160_ch_T0000679;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	78252	120557	1000	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG04160_ch_T0000680;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	78252	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	81694	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG04160_ch_T0000680:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	81695	81804	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	81805	82367	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG04160_ch_T0000680:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	82368	82454	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	82455	83501	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG04160_ch_T0000680:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	83502	83656	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:3;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	83657	114266	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG04160_ch_T0000680:3;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	114267	114352	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:4;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	114353	120129	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG04160_ch_T0000680:4;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	120130	120557	.	+	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000680;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000680;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG04160_ch_T0000680:5;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	78261	80173	100	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_G0000257;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG04160_ch_T0000681;Name=HSFY2
HG04160_chrY_random0000188	CAT	exon	78261	78515	.	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000681:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78505	78515	.	+	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000681:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	78505	78507	.	+	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG04160_ch_T0000681;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78516	78613	.	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000681:0;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	78614	78881	.	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000681:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	78614	78881	.	+	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000681:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	78882	79359	.	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG04160_ch_T0000681:1;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	79360	80173	.	+	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG04160_ch_T0000681:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	79360	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG04160_ch_T0000681:2;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	80050	80052	.	+	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000681;gene_id=HG04160_ch_G0000257;Parent=HG04160_ch_T0000681;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG04160_ch_T0000681;Name=HSFY2;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	112800	122115	.	-	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=HG04160_ch_G0000258;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG04160_ch_G0000258;Name=TTTY9A
HG04160_chrY_random0000188	CAT	transcript	112800	122115	1000	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_G0000258;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG04160_ch_T0000682;Name=TTTY9A
HG04160_chrY_random0000188	CAT	exon	112800	113942	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG04160_ch_T0000682:0;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	113943	119005	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG04160_ch_T0000682:0;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	119006	119142	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG04160_ch_T0000682:1;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	119143	119724	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG04160_ch_T0000682:1;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	119725	119838	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG04160_ch_T0000682:2;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	119839	120199	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG04160_ch_T0000682:2;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	120200	120300	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG04160_ch_T0000682:3;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	120301	121973	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG04160_ch_T0000682:3;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	121974	122115	.	-	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG04160_ch_T0000682;gene_id=HG04160_ch_G0000258;Parent=HG04160_ch_T0000682;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG04160_ch_T0000682:4;Name=TTTY9A;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	261511	270826	.	+	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=HG04160_ch_G0000259;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG04160_ch_G0000259;Name=TTTY9B
HG04160_chrY_random0000188	CAT	transcript	261511	270826	1000	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_G0000259;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG04160_ch_T0000683;Name=TTTY9B
HG04160_chrY_random0000188	CAT	exon	261511	261652	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG04160_ch_T0000683:0;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	261653	263325	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG04160_ch_T0000683:0;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	263326	263426	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG04160_ch_T0000683:1;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	263427	263787	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG04160_ch_T0000683:1;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	263788	263901	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG04160_ch_T0000683:2;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	263902	264483	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG04160_ch_T0000683:2;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	264484	264620	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG04160_ch_T0000683:3;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	264621	269683	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG04160_ch_T0000683:3;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	269684	270826	.	+	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG04160_ch_T0000683;gene_id=HG04160_ch_G0000259;Parent=HG04160_ch_T0000683;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG04160_ch_T0000683:4;Name=TTTY9B;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	263069	322407	.	-	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;gene_id=HG04160_ch_G0000260;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG04160_ch_G0000260;Name=HSFY1
HG04160_chrY_random0000188	CAT	transcript	263069	305358	100	-	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG04160_ch_T0000684;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	263069	263496	.	-	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000684:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	263398	263496	.	-	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000684:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	263398	263400	.	-	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG04160_ch_T0000684;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	263497	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000684:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305358	.	-	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000684:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	304749	305261	.	-	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000684:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	305259	305261	.	-	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000684;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000684;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG04160_ch_T0000684;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	263069	305358	1000	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG04160_ch_T0000685;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	263069	263496	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	263497	269273	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000685:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	269274	269359	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	269360	299973	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000685:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	299974	300128	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	300129	301175	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000685:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	301176	301262	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:3;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	301263	301825	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000685:3;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	301826	301935	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:4;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	301936	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000685:4;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305358	.	-	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000685;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000685;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000685:5;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	299973	305358	1000	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG04160_ch_T0000686;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	299973	300128	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000686:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	300129	301175	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000686:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	301176	301262	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000686:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	301263	301825	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000686:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	301826	301935	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000686:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	301936	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG04160_ch_T0000686:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305358	.	-	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000686;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000686;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG04160_ch_T0000686:3;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	303457	322407	100	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG04160_ch_T0000687;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	303457	304270	.	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000687:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	303578	304270	.	-	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000687:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	303578	303580	.	-	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG04160_ch_T0000687;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	304271	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000687:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305016	.	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000687:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	304749	305016	.	-	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000687:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	305017	322212	.	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000687:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	322213	322407	.	-	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000687:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	322213	322238	.	-	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000687:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	322236	322238	.	-	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000687;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000687;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG04160_ch_T0000687;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	303457	305368	100	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG04160_ch_T0000688;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	303457	304270	.	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000688:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	303578	304270	.	-	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000688:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	303578	303580	.	-	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG04160_ch_T0000688;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	304271	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000688:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305016	.	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000688:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	304749	305016	.	-	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000688:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	305017	305114	.	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000688:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	305115	305368	.	-	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000688:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	305115	305125	.	-	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000688:2;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	305123	305125	.	-	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000688;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000688;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG04160_ch_T0000688;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	303457	305329	100	-	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_G0000260;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG04160_ch_T0000689;Name=HSFY1
HG04160_chrY_random0000188	CAT	exon	303457	304270	.	-	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000689:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	303578	304270	.	-	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000689:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	stop_codon	303578	303580	.	-	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG04160_ch_T0000689;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	304271	304748	.	-	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG04160_ch_T0000689:0;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	304749	305329	.	-	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG04160_ch_T0000689:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	CDS	304749	305261	.	-	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG04160_ch_T0000689:1;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	start_codon	305259	305261	.	-	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG04160_ch_T0000689;gene_id=HG04160_ch_G0000260;Parent=HG04160_ch_T0000689;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG04160_ch_T0000689;Name=HSFY1;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	334184	368037	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG04160_ch_G0000261;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=HG04160_ch_G0000261;Name=LOC124905305
HG04160_chrY_random0000188	CAT	transcript	334184	368037	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_G0000261;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG04160_ch_T0000690;Name=LOC124905305
HG04160_chrY_random0000188	CAT	exon	334184	336491	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	336492	350998	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	350999	351430	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	351431	360222	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	360223	360357	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	360358	362073	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	362074	362277	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	362278	364639	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	364640	364741	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	364742	365394	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	365395	365557	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:5;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	365558	367958	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000690:5;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	367959	368037	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000690;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000690;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000690:6;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	transcript	334184	368035	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_G0000261;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG04160_ch_T0000691;Name=LOC124905305
HG04160_chrY_random0000188	CAT	exon	334184	336491	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	336492	345259	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:0;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	345260	345387	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	345388	350998	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:1;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	350999	351430	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	351431	360222	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:2;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	360223	360357	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	360358	362073	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:3;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	362074	362277	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	362278	364639	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:4;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	364640	364741	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:5;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	364742	365394	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:5;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	365395	365557	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:6;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	intron	365558	367958	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG04160_ch_T0000691:6;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	exon	367959	368035	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG04160_ch_T0000691;gene_id=HG04160_ch_G0000261;Parent=HG04160_ch_T0000691;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG04160_ch_T0000691:7;Name=LOC124905305;rna_support=False;reference_support=False
HG04160_chrY_random0000188	CAT	gene	365368	365529	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG04160_ch_G0000262;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG04160_ch_G0000262;Name=LOC124905307
HG04160_chrY_random0000188	CAT	transcript	365368	365529	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG04160_ch_T0000692;gene_id=HG04160_ch_G0000262;Parent=HG04160_ch_G0000262;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG04160_ch_T0000692;Name=LOC124905307
HG04160_chrY_random0000188	CAT	exon	365368	365529	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG04160_ch_T0000692;gene_id=HG04160_ch_G0000262;Parent=HG04160_ch_T0000692;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG04160_ch_T0000692:0;Name=LOC124905307;rna_support=False;reference_support=False